RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 ZNF746Q6NUN9 644 aaPredicted RBP23.88■■□□□ 1.41
UPF3A-201ENST00000351487 SHC3Q92529 594 aa23.88■■□□□ 1.41
UPF3A-201ENST00000351487 KAT5Q92993 513 aa23.88■■□□□ 1.41
UPF3A-201ENST00000351487 KREMEN1Q96MU8 473 aa23.88■■□□□ 1.41
UPF3A-201ENST00000351487 CELF4Q9BZC1 486 aaKnown RBP23.88■■□□□ 1.41
UPF3A-201ENST00000351487 RAB17Q9H0T7 212 aa23.88■■□□□ 1.41
UPF3A-201ENST00000351487 RPAP3Q9H6T3 665 aaPredicted RBP23.88■■□□□ 1.41
UPF3A-201ENST00000351487 CTTNBP2NLQ9P2B4 639 aa23.88■■□□□ 1.41
UPF3A-201ENST00000351487 NR2E1Q9Y466 385 aa23.88■■□□□ 1.41
UPF3A-201ENST00000351487 RLFQ13129 1914 aa23.88■■□□□ 1.41
UPF3A-201ENST00000351487 NR1D1P20393 614 aa23.87■■□□□ 1.41
UPF3A-201ENST00000351487 DMP1Q13316 513 aaPredicted RBP23.87■■□□□ 1.41
UPF3A-201ENST00000351487 ARHGEF16Q5VV41 709 aa23.87■■□□□ 1.41
UPF3A-201ENST00000351487 ANO5Q75V66 913 aa23.87■■□□□ 1.41
UPF3A-201ENST00000351487 CBWD2Q8IUF1 395 aa23.87■■□□□ 1.41
UPF3A-201ENST00000351487 PROCA1Q8NCQ7 364 aaPredicted RBP23.87■■□□□ 1.41
UPF3A-201ENST00000351487 CTDP1Q9Y5B0 961 aaPredicted RBP23.87■■□□□ 1.41
UPF3A-201ENST00000351487 VWA5AO00534 786 aa23.87■■□□□ 1.41
UPF3A-201ENST00000351487 CHRNB2P17787 502 aa23.87■■□□□ 1.41
UPF3A-201ENST00000351487 NPTX2P47972 431 aa23.87■■□□□ 1.41
UPF3A-201ENST00000351487 TMC3Q7Z5M5 1100 aa23.87■■□□□ 1.41
UPF3A-201ENST00000351487 NOP9Q86U38 636 aaKnown RBP23.87■■□□□ 1.41
UPF3A-201ENST00000351487 BCAS4Q8TDM0 211 aa23.87■■□□□ 1.41
UPF3A-201ENST00000351487 SPIRE2Q8WWL2 714 aa23.87■■□□□ 1.41
UPF3A-201ENST00000351487 RPS6KC1Q96S38 1066 aa23.87■■□□□ 1.41
UPF3A-201ENST00000351487 MOV10L1Q9BXT6 1211 aaKnown RBP23.87■■□□□ 1.41
UPF3A-201ENST00000351487 C17orf75Q9HAS0 396 aa23.87■■□□□ 1.41
UPF3A-201ENST00000351487 FEZ2Q9UHY8 353 aaPredicted RBP23.87■■□□□ 1.41
UPF3A-201ENST00000351487 TESPA1A2RU30 521 aaPredicted RBP23.86■■□□□ 1.41
UPF3A-201ENST00000351487 GOLGA8IPA6NC78 632 aa23.86■■□□□ 1.41
UPF3A-201ENST00000351487 GOLGA8JA6NMD2 632 aa23.86■■□□□ 1.41
UPF3A-201ENST00000351487 ANKRD63C9JTQ0 380 aa23.86■■□□□ 1.41
UPF3A-201ENST00000351487 ZEB2O60315 1214 aa23.86■■□□□ 1.41
UPF3A-201ENST00000351487 KRT39Q6A163 491 aa23.86■■□□□ 1.41
UPF3A-201ENST00000351487 PARD3BQ8TEW8 1205 aa23.86■■□□□ 1.41
UPF3A-201ENST00000351487 GPRASP2Q96D09 838 aa23.86■■□□□ 1.41
UPF3A-201ENST00000351487 FBXL18Q96ME1 805 aa23.86■■□□□ 1.41
UPF3A-201ENST00000351487 PCDHB18PQ96TA0 734 aa23.86■■□□□ 1.41
UPF3A-201ENST00000351487 NTPCRQ9BSD7 190 aaKnown RBP23.86■■□□□ 1.41
UPF3A-201ENST00000351487 GOLGA6L10A6NI86 522 aa23.86■■□□□ 1.41
UPF3A-201ENST00000351487 SGPL1O95470 568 aa23.86■■□□□ 1.41
UPF3A-201ENST00000351487 HSPA6P17066 643 aa23.86■■□□□ 1.41
UPF3A-201ENST00000351487 CNGA1P29973 690 aa23.86■■□□□ 1.41
UPF3A-201ENST00000351487 GPC3P51654 580 aa23.86■■□□□ 1.41
UPF3A-201ENST00000351487 MFAP3P55082 362 aa23.86■■□□□ 1.41
UPF3A-201ENST00000351487 PDCLQ13371 301 aa23.86■■□□□ 1.41
UPF3A-201ENST00000351487 PRPF4BQ13523 1007 aaKnown RBP23.86■■□□□ 1.41
UPF3A-201ENST00000351487 NSMFQ6X4W1 530 aa23.86■■□□□ 1.41
UPF3A-201ENST00000351487 TMC2Q8TDI7 906 aa23.86■■□□□ 1.41
UPF3A-201ENST00000351487 MORC4Q8TE76 937 aa23.86■■□□□ 1.41
UPF3A-201ENST00000351487 ATP8B4Q8TF62 1192 aa23.86■■□□□ 1.41
UPF3A-201ENST00000351487 TMEM8AQ9HCN3 771 aa23.86■■□□□ 1.41
UPF3A-201ENST00000351487 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.86■■□□□ 1.41
UPF3A-201ENST00000351487 FAM187AA6NFU0 413 aa23.85■■□□□ 1.41
UPF3A-201ENST00000351487 EGFRP00533 1210 aa23.85■■□□□ 1.41
UPF3A-201ENST00000351487 FLT3P36888 993 aa23.85■■□□□ 1.41
UPF3A-201ENST00000351487 DHX34Q14147 1143 aaKnown RBP23.85■■□□□ 1.41
UPF3A-201ENST00000351487 SPDYCQ5MJ68 293 aa23.85■■□□□ 1.41
UPF3A-201ENST00000351487 NAA35Q5VZE5 725 aa23.85■■□□□ 1.41
UPF3A-201ENST00000351487 VSIG10LQ86VR7 867 aa23.85■■□□□ 1.41
UPF3A-201ENST00000351487 UBL4BQ8N7F7 174 aa23.85■■□□□ 1.41
UPF3A-201ENST00000351487 KIFAP3Q92845 792 aa23.85■■□□□ 1.41
UPF3A-201ENST00000351487 SEMA4DQ92854 862 aa23.85■■□□□ 1.41
UPF3A-201ENST00000351487 ZSWIM1Q9BR11 485 aa23.85■■□□□ 1.41
UPF3A-201ENST00000351487 ERVK-5Q9HDB9 667 aa23.85■■□□□ 1.41
UPF3A-201ENST00000351487 PCDHA10Q9Y5I2 948 aa23.85■■□□□ 1.41
UPF3A-201ENST00000351487 PHIPQ8WWQ0 1821 aa23.85■■□□□ 1.41
UPF3A-201ENST00000351487 CCDC169A6NNP5 214 aa23.84■■□□□ 1.41
UPF3A-201ENST00000351487 MYZAPP0CAP1 466 aa23.84■■□□□ 1.41
UPF3A-201ENST00000351487 CCND2P30279 289 aa23.84■■□□□ 1.41
UPF3A-201ENST00000351487 CTNNA1P35221 906 aaKnown RBP23.84■■□□□ 1.41
UPF3A-201ENST00000351487 DR1Q01658 176 aa23.84■■□□□ 1.41
UPF3A-201ENST00000351487 MAP2K1Q02750 393 aaPredicted RBP23.84■■□□□ 1.41
UPF3A-201ENST00000351487 ZNF844Q08AG5 666 aa23.84■■□□□ 1.41
UPF3A-201ENST00000351487 PPM1KQ8N3J5 372 aa23.84■■□□□ 1.41
UPF3A-201ENST00000351487 RNF146Q9NTX7 359 aa23.84■■□□□ 1.41
UPF3A-201ENST00000351487 DENND3A2RUS2 1198 aa23.84■■□□□ 1.41
UPF3A-201ENST00000351487 MAFGO15525 162 aa23.84■■□□□ 1.41
UPF3A-201ENST00000351487 GTF2H1P32780 548 aa23.84■■□□□ 1.41
UPF3A-201ENST00000351487 USP8P40818 1118 aa23.84■■□□□ 1.41
UPF3A-201ENST00000351487 ATP1A2P50993 1020 aa23.84■■□□□ 1.41
UPF3A-201ENST00000351487 ENPEPQ07075 957 aa23.84■■□□□ 1.41
UPF3A-201ENST00000351487 ZNF211Q13398 564 aaPredicted RBP23.84■■□□□ 1.41
UPF3A-201ENST00000351487 DUPD1Q68J44 220 aa23.84■■□□□ 1.41
UPF3A-201ENST00000351487 NLRX1Q86UT6 975 aa23.84■■□□□ 1.41
UPF3A-201ENST00000351487 HELQQ8TDG4 1101 aa23.84■■□□□ 1.41
UPF3A-201ENST00000351487 ATG4CQ96DT6 458 aa23.84■■□□□ 1.41
UPF3A-201ENST00000351487 SAAL1Q96ER3 474 aa23.84■■□□□ 1.41
UPF3A-201ENST00000351487 MFSD14AQ96MC6 490 aa23.84■■□□□ 1.41
UPF3A-201ENST00000351487 TRIM51Q9BSJ1 452 aa23.84■■□□□ 1.41
UPF3A-201ENST00000351487 KIFC3Q9BVG8 833 aa23.84■■□□□ 1.41
UPF3A-201ENST00000351487 KMT5AQ9NQR1 393 aa23.84■■□□□ 1.41
UPF3A-201ENST00000351487 TMOD4Q9NZQ9 345 aa23.84■■□□□ 1.41
UPF3A-201ENST00000351487 CYP26A1O43174 497 aa23.83■■□□□ 1.41
UPF3A-201ENST00000351487 RPS12P25398 132 aaKnown RBP23.83■■□□□ 1.41
UPF3A-201ENST00000351487 CCT5P48643 541 aa23.83■■□□□ 1.41
UPF3A-201ENST00000351487 CORO7P57737 925 aa23.83■■□□□ 1.41
UPF3A-201ENST00000351487 FMO1Q01740 532 aa23.83■■□□□ 1.41
UPF3A-201ENST00000351487 BAATQ14032 418 aaPredicted RBP23.83■■□□□ 1.41
UPF3A-201ENST00000351487 TBC1D10BQ4KMP7 808 aaPredicted RBP23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms