RNA–Protein interactions for RNA: ENST00000347615.6

SMG7-201, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMG7, Length 5,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-201ENST00000347615 DBN1Q16643 649 aa11.17□□□□□ -0.62
SMG7-201ENST00000347615 JADE1Q6IE81 842 aa11.17□□□□□ -0.62
SMG7-201ENST00000347615 SPOPLQ6IQ16 392 aa11.17□□□□□ -0.62
SMG7-201ENST00000347615 RSRC2Q7L4I2 434 aaKnown RBP11.17□□□□□ -0.62
SMG7-201ENST00000347615 RHPN2Q8IUC4 686 aa11.17□□□□□ -0.62
SMG7-201ENST00000347615 LINC00116Q8NCU8 138 aa11.17□□□□□ -0.62
SMG7-201ENST00000347615 NUDCD1Q96RS6 583 aa11.17□□□□□ -0.62
SMG7-201ENST00000347615 ABCF3Q9NUQ8 709 aa11.17□□□□□ -0.62
SMG7-201ENST00000347615 DAGLAQ9Y4D2 1042 aa11.17□□□□□ -0.62
SMG7-201ENST00000347615 TJP3O95049 919 aa11.17□□□□□ -0.62
SMG7-201ENST00000347615 NAB2Q15742 525 aa11.17□□□□□ -0.62
SMG7-201ENST00000347615 PRAMEF18Q5VWM3 479 aa11.17□□□□□ -0.62
SMG7-201ENST00000347615 CDKL2Q92772 493 aa11.17□□□□□ -0.62
SMG7-201ENST00000347615 FAM49AQ9H0Q0 323 aaPredicted RBP11.17□□□□□ -0.62
SMG7-201ENST00000347615 TTC36A6NLP5 189 aa11.17□□□□□ -0.62
SMG7-201ENST00000347615 SKAP2O75563 359 aaPredicted RBP11.17□□□□□ -0.62
SMG7-201ENST00000347615 LCA5Q86VQ0 697 aa11.17□□□□□ -0.62
SMG7-201ENST00000347615 MAP7D3Q8IWC1 876 aa11.17□□□□□ -0.62
SMG7-201ENST00000347615 GLIS3Q8NEA6 775 aa11.17□□□□□ -0.62
SMG7-201ENST00000347615 VPS11Q9H270 941 aa11.17□□□□□ -0.62
SMG7-201ENST00000347615 JMJD4Q9H9V9 463 aa11.17□□□□□ -0.62
SMG7-201ENST00000347615 GRAP2O75791 330 aa11.16□□□□□ -0.62
SMG7-201ENST00000347615 ALDH18A1P54886 795 aaKnown RBP11.16□□□□□ -0.62
SMG7-201ENST00000347615 CORO7P57737 925 aa11.16□□□□□ -0.62
SMG7-201ENST00000347615 PTGISQ16647 500 aa11.16□□□□□ -0.62
SMG7-201ENST00000347615 C1orf146Q5VVC0 180 aa11.16□□□□□ -0.62
SMG7-201ENST00000347615 CLEC4GQ6UXB4 293 aa11.16□□□□□ -0.62
SMG7-201ENST00000347615 CATSPER3Q86XQ3 398 aa11.16□□□□□ -0.62
SMG7-201ENST00000347615 SNF8Q96H20 258 aa11.16□□□□□ -0.62
SMG7-201ENST00000347615 TSC22D3Q99576 134 aa11.16□□□□□ -0.62
SMG7-201ENST00000347615 INTS13Q9NVM9 706 aa11.16□□□□□ -0.62
SMG7-201ENST00000347615 SPECC1L-ADORA2AF8WAN1 911 aa11.16□□□□□ -0.62
SMG7-201ENST00000347615 LPXNO60711 386 aa11.16□□□□□ -0.62
SMG7-201ENST00000347615 CNGA1P29973 690 aa11.16□□□□□ -0.62
SMG7-201ENST00000347615 CDC25CP30307 473 aa11.16□□□□□ -0.62
SMG7-201ENST00000347615 CHRNA3P32297 505 aa11.16□□□□□ -0.62
SMG7-201ENST00000347615 FMO5P49326 533 aa11.16□□□□□ -0.62
SMG7-201ENST00000347615 COG2Q14746 738 aa11.16□□□□□ -0.62
SMG7-201ENST00000347615 CCDC93Q567U6 631 aa11.16□□□□□ -0.62
SMG7-201ENST00000347615 HAUS6Q7Z4H7 955 aa11.16□□□□□ -0.62
SMG7-201ENST00000347615 LONP2Q86WA8 852 aa11.16□□□□□ -0.62
SMG7-201ENST00000347615 JAMLQ86YT9 394 aa11.16□□□□□ -0.62
SMG7-201ENST00000347615 ANKS1AQ92625 1134 aa11.16□□□□□ -0.62
SMG7-201ENST00000347615 PLA2G12BQ9BX93 195 aa11.16□□□□□ -0.62
SMG7-201ENST00000347615 COA1Q9GZY4 146 aa11.16□□□□□ -0.62
SMG7-201ENST00000347615 CSADQ9Y600 493 aa11.16□□□□□ -0.62
SMG7-201ENST00000347615 GPC4O75487 556 aa11.16□□□□□ -0.62
SMG7-201ENST00000347615 OVGP1Q12889 678 aa11.16□□□□□ -0.62
SMG7-201ENST00000347615 AP3B2Q13367 1082 aa11.16□□□□□ -0.62
SMG7-201ENST00000347615 C3orf67Q6ZVT6 689 aa11.16□□□□□ -0.62
SMG7-201ENST00000347615 TMEM143Q96AN5 459 aa11.16□□□□□ -0.62
SMG7-201ENST00000347615 TRIM55Q9BYV6 548 aa11.16□□□□□ -0.62
SMG7-201ENST00000347615 ZNF277Q9NRM2 450 aaPredicted RBP11.16□□□□□ -0.62
SMG7-201ENST00000347615 ENO1P06733 434 aaKnown RBP11.16□□□□□ -0.62
SMG7-201ENST00000347615 HSPA6P17066 643 aa11.16□□□□□ -0.62
SMG7-201ENST00000347615 ORC1Q13415 861 aa11.16□□□□□ -0.62
SMG7-201ENST00000347615 TRIM11Q96F44 468 aa11.16□□□□□ -0.62
SMG7-201ENST00000347615 XPO6Q96QU8 1125 aaKnown RBP11.16□□□□□ -0.62
SMG7-201ENST00000347615 RUSC1Q9BVN2 902 aa11.16□□□□□ -0.62
SMG7-201ENST00000347615 UBN1Q9NPG3 1134 aa11.16□□□□□ -0.62
SMG7-201ENST00000347615 SPDYE16A6NNV3 312 aaPredicted RBP11.16□□□□□ -0.62
SMG7-201ENST00000347615 CREB3O43889 395 aa11.16□□□□□ -0.62
SMG7-201ENST00000347615 PSAPP07602 524 aa11.16□□□□□ -0.62
SMG7-201ENST00000347615 ITGA4P13612 1032 aa11.16□□□□□ -0.62
SMG7-201ENST00000347615 SPDYE2Q495Y8 402 aa11.16□□□□□ -0.62
SMG7-201ENST00000347615 SPATA21Q7Z572 469 aa11.16□□□□□ -0.62
SMG7-201ENST00000347615 CDR2LQ86X02 465 aaPredicted RBP11.16□□□□□ -0.62
SMG7-201ENST00000347615 DCAF4Q8WV16 495 aa11.16□□□□□ -0.62
SMG7-201ENST00000347615 MTMR8Q96EF0 704 aa11.16□□□□□ -0.62
SMG7-201ENST00000347615 POP1Q99575 1024 aaKnown RBP11.16□□□□□ -0.62
SMG7-201ENST00000347615 SHCBP1LQ9BZQ2 653 aa11.16□□□□□ -0.62
SMG7-201ENST00000347615 VIPAS39Q9H9C1 493 aa11.16□□□□□ -0.62
SMG7-201ENST00000347615 AS3MTQ9HBK9 375 aa11.16□□□□□ -0.62
SMG7-201ENST00000347615 HSPBP1Q9NZL4 362 aa11.16□□□□□ -0.62
SMG7-201ENST00000347615 APEX2Q9UBZ4 518 aa11.16□□□□□ -0.62
SMG7-201ENST00000347615 FAF1Q9UNN5 650 aaPredicted RBP11.16□□□□□ -0.62
SMG7-201ENST00000347615 TMEM120BA0PK00 339 aa11.15□□□□□ -0.62
SMG7-201ENST00000347615 CAND2O75155 1236 aa11.15□□□□□ -0.62
SMG7-201ENST00000347615 CHRNA5P30532 468 aa11.15□□□□□ -0.62
SMG7-201ENST00000347615 RCAN1P53805 252 aa11.15□□□□□ -0.62
SMG7-201ENST00000347615 ZNF543Q08ER8 600 aa11.15□□□□□ -0.62
SMG7-201ENST00000347615 RBBP5Q15291 538 aaKnown RBP11.15□□□□□ -0.62
SMG7-201ENST00000347615 FRMD5Q7Z6J6 570 aa11.15□□□□□ -0.62
SMG7-201ENST00000347615 LRRC34Q8IZ02 419 aa11.15□□□□□ -0.62
SMG7-201ENST00000347615 OR6B3Q8NGW1 331 aa11.15□□□□□ -0.62
SMG7-201ENST00000347615 TRAIPQ9BWF2 469 aa11.15□□□□□ -0.62
SMG7-201ENST00000347615 FAM217BQ9NTX9 383 aaPredicted RBP11.15□□□□□ -0.62
SMG7-201ENST00000347615 NTSR2O95665 410 aa11.15□□□□□ -0.62
SMG7-201ENST00000347615 HMGB2P26583 209 aaKnown RBP11.15□□□□□ -0.62
SMG7-201ENST00000347615 CDR2Q01850 454 aa11.15□□□□□ -0.62
SMG7-201ENST00000347615 POLR3FQ9H1D9 316 aaPredicted RBP11.15□□□□□ -0.62
SMG7-201ENST00000347615 ALG6Q9Y672 507 aa11.15□□□□□ -0.62
SMG7-201ENST00000347615 MIF4GDA9UHW6 222 aaKnown RBP11.15□□□□□ -0.62
SMG7-201ENST00000347615 WNT7AO00755 349 aa11.15□□□□□ -0.62
SMG7-201ENST00000347615 MED24O75448 989 aa11.15□□□□□ -0.62
SMG7-201ENST00000347615 SLURP2P0DP57 97 aa11.15□□□□□ -0.62
SMG7-201ENST00000347615 HSPA9P38646 679 aaKnown RBP11.15□□□□□ -0.62
SMG7-201ENST00000347615 TRIM28Q13263 835 aaKnown RBP11.15□□□□□ -0.62
SMG7-201ENST00000347615 TSTA3Q13630 321 aaPredicted RBP11.15□□□□□ -0.62
SMG7-201ENST00000347615 TTI2Q6NXR4 508 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms