RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 KRT7P08729 469 aa18.52■□□□□ 0.56
SPAST-202ENST00000345662 KLRC1P26715 233 aa18.52■□□□□ 0.56
SPAST-202ENST00000345662 STK4Q13043 487 aa18.52■□□□□ 0.56
SPAST-202ENST00000345662 TRIP10Q15642 601 aa18.52■□□□□ 0.56
SPAST-202ENST00000345662 TMTC4Q5T4D3 741 aa18.52■□□□□ 0.56
SPAST-202ENST00000345662 TMED8Q6PL24 325 aaPredicted RBP18.52■□□□□ 0.56
SPAST-202ENST00000345662 SCARA5Q6ZMJ2 495 aa18.52■□□□□ 0.56
SPAST-202ENST00000345662 LARGE2Q8N3Y3 721 aa18.52■□□□□ 0.56
SPAST-202ENST00000345662 THTPAQ9BU02 230 aa18.52■□□□□ 0.56
SPAST-202ENST00000345662 DDX56Q9NY93 547 aaKnown RBP18.52■□□□□ 0.56
SPAST-202ENST00000345662 PSMC3IPQ9P2W1 217 aaPredicted RBP18.52■□□□□ 0.56
SPAST-202ENST00000345662 LZTS1Q9Y250 596 aa18.52■□□□□ 0.56
SPAST-202ENST00000345662 GOLGA8RI6L899 631 aa18.52■□□□□ 0.55
SPAST-202ENST00000345662 INO80B-WBP1J3KQ70 363 aa18.52■□□□□ 0.55
SPAST-202ENST00000345662 UCHL3P15374 230 aa18.52■□□□□ 0.55
SPAST-202ENST00000345662 LTKP29376 864 aa18.52■□□□□ 0.55
SPAST-202ENST00000345662 HOXA13P31271 388 aaPredicted RBP18.52■□□□□ 0.55
SPAST-202ENST00000345662 SLC1A1P43005 524 aa18.52■□□□□ 0.55
SPAST-202ENST00000345662 PPP6R3Q5H9R7 873 aaPredicted RBP18.52■□□□□ 0.55
SPAST-202ENST00000345662 ERGIC2Q96RQ1 377 aa18.52■□□□□ 0.55
SPAST-202ENST00000345662 INO80BQ9C086 356 aaPredicted RBP18.52■□□□□ 0.55
SPAST-202ENST00000345662 CPVLQ9H3G5 476 aa18.52■□□□□ 0.55
SPAST-202ENST00000345662 TMEM260Q9NX78 707 aa18.52■□□□□ 0.55
SPAST-202ENST00000345662 SHROOM2Q13796 1616 aa18.51■□□□□ 0.55
SPAST-202ENST00000345662 SPDYE16A6NNV3 312 aaPredicted RBP18.51■□□□□ 0.55
SPAST-202ENST00000345662 ZBTB5O15062 677 aa18.51■□□□□ 0.55
SPAST-202ENST00000345662 E2F6O75461 281 aa18.51■□□□□ 0.55
SPAST-202ENST00000345662 SPDYE2Q495Y8 402 aa18.51■□□□□ 0.55
SPAST-202ENST00000345662 TMEM270Q6UE05 265 aa18.51■□□□□ 0.55
SPAST-202ENST00000345662 CCDC90BQ9GZT6 254 aa18.51■□□□□ 0.55
SPAST-202ENST00000345662 POTEFA5A3E0 1075 aa18.51■□□□□ 0.55
SPAST-202ENST00000345662 B2RBV5 119 aa18.51■□□□□ 0.55
SPAST-202ENST00000345662 SASH3O75995 380 aa18.51■□□□□ 0.55
SPAST-202ENST00000345662 POTEIP0CG38 1075 aa18.51■□□□□ 0.55
SPAST-202ENST00000345662 MDH1BQ5I0G3 518 aa18.51■□□□□ 0.55
SPAST-202ENST00000345662 POTEGQ6S5H5 508 aa18.51■□□□□ 0.55
SPAST-202ENST00000345662 POTEEQ6S8J3 1075 aa18.51■□□□□ 0.55
SPAST-202ENST00000345662 RHPN2Q8IUC4 686 aa18.51■□□□□ 0.55
SPAST-202ENST00000345662 DNAJC7Q99615 494 aa18.51■□□□□ 0.55
SPAST-202ENST00000345662 GCOM2Q9BZD3 368 aaPredicted RBP18.51■□□□□ 0.55
SPAST-202ENST00000345662 NBPF3Q9H094 633 aa18.51■□□□□ 0.55
SPAST-202ENST00000345662 PALMDQ9NP74 551 aa18.51■□□□□ 0.55
SPAST-202ENST00000345662 ASNSD1Q9NWL6 643 aa18.51■□□□□ 0.55
SPAST-202ENST00000345662 USP17L5A8MUK1 530 aa18.51■□□□□ 0.55
SPAST-202ENST00000345662 LDHAP00338 332 aaKnown RBP18.51■□□□□ 0.55
SPAST-202ENST00000345662 TRIM49P0CI25 452 aa18.51■□□□□ 0.55
SPAST-202ENST00000345662 TRIM49CP0CI26 452 aa18.51■□□□□ 0.55
SPAST-202ENST00000345662 IGDCC4Q8TDY8 1250 aa18.51■□□□□ 0.55
SPAST-202ENST00000345662 HEXIM2Q96MH2 286 aaKnown RBP18.51■□□□□ 0.55
SPAST-202ENST00000345662 KCNK16Q96T55 309 aa18.51■□□□□ 0.55
SPAST-202ENST00000345662 MSTO1Q9BUK6 570 aa18.51■□□□□ 0.55
SPAST-202ENST00000345662 FOXP3Q9BZS1 431 aa18.51■□□□□ 0.55
SPAST-202ENST00000345662 HEY1Q9Y5J3 304 aa18.51■□□□□ 0.55
SPAST-202ENST00000345662 KYNUQ16719 465 aa18.51■□□□□ 0.55
SPAST-202ENST00000345662 MIS18BP1Q6P0N0 1132 aa18.51■□□□□ 0.55
SPAST-202ENST00000345662 RIBC1Q8N443 379 aaPredicted RBP18.51■□□□□ 0.55
SPAST-202ENST00000345662 LRRN4CLQ8ND94 238 aa18.51■□□□□ 0.55
SPAST-202ENST00000345662 STK33Q9BYT3 514 aa18.51■□□□□ 0.55
SPAST-202ENST00000345662 AS3MTQ9HBK9 375 aa18.51■□□□□ 0.55
SPAST-202ENST00000345662 PCDHA6Q9UN73 950 aa18.51■□□□□ 0.55
SPAST-202ENST00000345662 PCDHA8Q9Y5H6 950 aa18.51■□□□□ 0.55
SPAST-202ENST00000345662 SMARCA1P28370 1054 aa18.5■□□□□ 0.55
SPAST-202ENST00000345662 CRKLP46109 303 aaKnown RBP18.5■□□□□ 0.55
SPAST-202ENST00000345662 PSMD7P51665 324 aa18.5■□□□□ 0.55
SPAST-202ENST00000345662 KIAA1586Q9HCI6 787 aa18.5■□□□□ 0.55
SPAST-202ENST00000345662 SUCLA2Q9P2R7 463 aaPredicted RBP18.5■□□□□ 0.55
SPAST-202ENST00000345662 PDHBP11177 359 aa18.5■□□□□ 0.55
SPAST-202ENST00000345662 KCNA4P22459 653 aa18.5■□□□□ 0.55
SPAST-202ENST00000345662 ARHGDIAP52565 204 aa18.5■□□□□ 0.55
SPAST-202ENST00000345662 ANKMY2Q8IV38 441 aa18.5■□□□□ 0.55
SPAST-202ENST00000345662 NSL1Q96IY1 281 aa18.5■□□□□ 0.55
SPAST-202ENST00000345662 PABPC3Q9H361 631 aaKnown RBP18.5■□□□□ 0.55
SPAST-202ENST00000345662 ASAP2O43150 1006 aa18.5■□□□□ 0.55
SPAST-202ENST00000345662 TMED10P49755 219 aaKnown RBP18.5■□□□□ 0.55
SPAST-202ENST00000345662 KLK7P49862 253 aa18.5■□□□□ 0.55
SPAST-202ENST00000345662 PDIA5Q14554 519 aa18.5■□□□□ 0.55
SPAST-202ENST00000345662 KIAA2013Q8IYS2 634 aa18.5■□□□□ 0.55
SPAST-202ENST00000345662 C7orf31Q8N865 590 aa18.5■□□□□ 0.55
SPAST-202ENST00000345662 CCDC134Q9H6E4 229 aa18.5■□□□□ 0.55
SPAST-202ENST00000345662 TAF6LQ9Y6J9 622 aa18.5■□□□□ 0.55
SPAST-202ENST00000345662 TCP10L2B9ZVM9 353 aa18.5■□□□□ 0.55
SPAST-202ENST00000345662 SLC16A3O15427 465 aaKnown RBP18.5■□□□□ 0.55
SPAST-202ENST00000345662 YWHAHQ04917 246 aaPredicted RBP18.5■□□□□ 0.55
SPAST-202ENST00000345662 RYBPQ8N488 228 aaPredicted RBP18.5■□□□□ 0.55
SPAST-202ENST00000345662 CCNYL1Q8N7R7 359 aa18.5■□□□□ 0.55
SPAST-202ENST00000345662 SYN2Q92777 582 aaPredicted RBP18.5■□□□□ 0.55
SPAST-202ENST00000345662 UVRAGQ9P2Y5 699 aa18.5■□□□□ 0.55
SPAST-202ENST00000345662 M0QZ92 97 aa18.49■□□□□ 0.55
SPAST-202ENST00000345662 CLDN3O15551 220 aa18.49■□□□□ 0.55
SPAST-202ENST00000345662 TDP2O95551 362 aa18.49■□□□□ 0.55
SPAST-202ENST00000345662 DOK7Q18PE1 504 aa18.49■□□□□ 0.55
SPAST-202ENST00000345662 P3H1Q32P28 736 aa18.49■□□□□ 0.55
SPAST-202ENST00000345662 TRIM72Q6ZMU5 477 aa18.49■□□□□ 0.55
SPAST-202ENST00000345662 PLAGL2Q9UPG8 496 aa18.49■□□□□ 0.55
SPAST-202ENST00000345662 PLEKHG2Q9H7P9 1386 aa18.49■□□□□ 0.55
SPAST-202ENST00000345662 H0YIN7 160 aa18.49■□□□□ 0.55
SPAST-202ENST00000345662 ARHGEF9O43307 516 aa18.49■□□□□ 0.55
SPAST-202ENST00000345662 SNUPNO95149 360 aaKnown RBP18.49■□□□□ 0.55
SPAST-202ENST00000345662 ATP6V1G2O95670 118 aa18.49■□□□□ 0.55
SPAST-202ENST00000345662 ZNF18P17022 549 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms