RNA–Protein interactions for RNA: ENST00000345519.9

CLTA-202, Transcript of clathrin light chain A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLTA, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-202ENST00000345519 TLR9Q9NR96 1032 aa21.88■■□□□ 1.09
CLTA-202ENST00000345519 KANSL3Q9P2N6 904 aa21.88■■□□□ 1.09
CLTA-202ENST00000345519 GIT1Q9Y2X7 761 aa21.88■■□□□ 1.09
CLTA-202ENST00000345519 MTCL1Q9Y4B5 1905 aaKnown RBP21.88■■□□□ 1.09
CLTA-202ENST00000345519 VWA8A3KMH1 1905 aa21.87■■□□□ 1.09
CLTA-202ENST00000345519 N4BP3O15049 544 aa21.87■■□□□ 1.09
CLTA-202ENST00000345519 PLCG1P19174 1290 aa21.87■■□□□ 1.09
CLTA-202ENST00000345519 IRS1P35568 1242 aa21.87■■□□□ 1.09
CLTA-202ENST00000345519 AFF1P51825 1210 aaKnown RBP21.87■■□□□ 1.09
CLTA-202ENST00000345519 ZNF131P52739 623 aa21.87■■□□□ 1.09
CLTA-202ENST00000345519 BCAR1P56945 870 aa21.87■■□□□ 1.09
CLTA-202ENST00000345519 DSC1Q08554 894 aa21.87■■□□□ 1.09
CLTA-202ENST00000345519 HYAL1Q12794 435 aa21.87■■□□□ 1.09
CLTA-202ENST00000345519 DMP1Q13316 513 aaPredicted RBP21.87■■□□□ 1.09
CLTA-202ENST00000345519 KARSQ15046 597 aaKnown RBP21.87■■□□□ 1.09
CLTA-202ENST00000345519 AAK1Q2M2I8 961 aa21.87■■□□□ 1.09
CLTA-202ENST00000345519 SPOUT1Q5T280 376 aaKnown RBP21.87■■□□□ 1.09
CLTA-202ENST00000345519 TAS1R3Q7RTX0 852 aa21.87■■□□□ 1.09
CLTA-202ENST00000345519 THNSL1Q8IYQ7 743 aa21.87■■□□□ 1.09
CLTA-202ENST00000345519 GSTCDQ8NEC7 633 aa21.87■■□□□ 1.09
CLTA-202ENST00000345519 CDK5RAP3Q96JB5 506 aa21.87■■□□□ 1.09
CLTA-202ENST00000345519 ODF2LQ9ULJ1 636 aa21.87■■□□□ 1.09
CLTA-202ENST00000345519 PLXNA3P51805 1871 aa21.86■■□□□ 1.09
CLTA-202ENST00000345519 ITGA4P13612 1032 aa21.86■■□□□ 1.09
CLTA-202ENST00000345519 PEX3P56589 373 aa21.86■■□□□ 1.09
CLTA-202ENST00000345519 TFF2Q03403 129 aa21.86■■□□□ 1.09
CLTA-202ENST00000345519 PRPF4BQ13523 1007 aaKnown RBP21.86■■□□□ 1.09
CLTA-202ENST00000345519 USP49Q70CQ1 688 aa21.86■■□□□ 1.09
CLTA-202ENST00000345519 LINC00301Q8NCQ3 95 aa21.86■■□□□ 1.09
CLTA-202ENST00000345519 URGCPQ8TCY9 931 aa21.86■■□□□ 1.09
CLTA-202ENST00000345519 RAD54LQ92698 747 aa21.86■■□□□ 1.09
CLTA-202ENST00000345519 TMEM175Q9BSA9 504 aa21.86■■□□□ 1.09
CLTA-202ENST00000345519 COL25A1Q9BXS0 654 aaPredicted RBP21.86■■□□□ 1.09
CLTA-202ENST00000345519 RNF39Q9H2S5 420 aa21.86■■□□□ 1.09
CLTA-202ENST00000345519 SPG21Q9NZD8 308 aa21.86■■□□□ 1.09
CLTA-202ENST00000345519 KCNG1Q9UIX4 513 aa21.86■■□□□ 1.09
CLTA-202ENST00000345519 RBM19Q9Y4C8 960 aaKnown RBP21.86■■□□□ 1.09
CLTA-202ENST00000345519 HES2Q9Y543 173 aa21.86■■□□□ 1.09
CLTA-202ENST00000345519 ARL5CA6NH57 179 aa21.85■■□□□ 1.09
CLTA-202ENST00000345519 EFEMP2O95967 443 aa21.85■■□□□ 1.09
CLTA-202ENST00000345519 GALTP07902 379 aa21.85■■□□□ 1.09
CLTA-202ENST00000345519 ZSCAN22P10073 491 aaPredicted RBP21.85■■□□□ 1.09
CLTA-202ENST00000345519 BMP1P13497 986 aa21.85■■□□□ 1.09
CLTA-202ENST00000345519 PLS3P13797 630 aa21.85■■□□□ 1.09
CLTA-202ENST00000345519 MARCKSP29966 332 aaPredicted RBP21.85■■□□□ 1.09
CLTA-202ENST00000345519 LTBRP36941 435 aa21.85■■□□□ 1.09
CLTA-202ENST00000345519 PBX3P40426 434 aa21.85■■□□□ 1.09
CLTA-202ENST00000345519 SKIV2LQ15477 1246 aaKnown RBP21.85■■□□□ 1.09
CLTA-202ENST00000345519 LEXMQ3ZCV2 418 aa21.85■■□□□ 1.09
CLTA-202ENST00000345519 NT5DC1Q5TFE4 455 aa21.85■■□□□ 1.09
CLTA-202ENST00000345519 HACE1Q8IYU2 909 aa21.85■■□□□ 1.09
CLTA-202ENST00000345519 EPSTI1Q96J88 318 aa21.85■■□□□ 1.09
CLTA-202ENST00000345519 POLD4Q9HCU8 107 aa21.85■■□□□ 1.09
CLTA-202ENST00000345519 PTPRHQ9HD43 1115 aa21.85■■□□□ 1.09
CLTA-202ENST00000345519 STK17AQ9UEE5 414 aa21.85■■□□□ 1.09
CLTA-202ENST00000345519 DENND4AQ7Z401 1863 aa21.84■■□□□ 1.09
CLTA-202ENST00000345519 FSD2A1L4K1 749 aa21.84■■□□□ 1.09
CLTA-202ENST00000345519 PPP6R2O75170 966 aa21.84■■□□□ 1.09
CLTA-202ENST00000345519 DDHD2O94830 711 aa21.84■■□□□ 1.09
CLTA-202ENST00000345519 NPTXRO95502 500 aa21.84■■□□□ 1.09
CLTA-202ENST00000345519 YEATS4O95619 227 aa21.84■■□□□ 1.09
CLTA-202ENST00000345519 F13A1P00488 732 aa21.84■■□□□ 1.09
CLTA-202ENST00000345519 PROZP22891 400 aa21.84■■□□□ 1.09
CLTA-202ENST00000345519 ALDH7A1P49419 539 aaKnown RBP21.84■■□□□ 1.09
CLTA-202ENST00000345519 ERVFC1P60507 584 aa21.84■■□□□ 1.09
CLTA-202ENST00000345519 KCNC3Q14003 757 aa21.84■■□□□ 1.09
CLTA-202ENST00000345519 ZRSR1Q15695 479 aaKnown RBP21.84■■□□□ 1.09
CLTA-202ENST00000345519 LONRF3Q496Y0 759 aa21.84■■□□□ 1.09
CLTA-202ENST00000345519 TMEM173Q86WV6 379 aaPredicted RBP21.84■■□□□ 1.09
CLTA-202ENST00000345519 CDR2LQ86X02 465 aaPredicted RBP21.84■■□□□ 1.09
CLTA-202ENST00000345519 ZNF280BQ86YH2 543 aa21.84■■□□□ 1.09
CLTA-202ENST00000345519 TMEM161BQ8NDZ6 487 aa21.84■■□□□ 1.09
CLTA-202ENST00000345519 LARP4BQ92615 738 aaKnown RBP21.84■■□□□ 1.09
CLTA-202ENST00000345519 SYMPKQ92797 1274 aaKnown RBP21.84■■□□□ 1.09
CLTA-202ENST00000345519 IGSF21Q96ID5 467 aa21.84■■□□□ 1.09
CLTA-202ENST00000345519 PLIN2Q99541 437 aa21.84■■□□□ 1.09
CLTA-202ENST00000345519 TRIM6Q9C030 488 aaPredicted RBP21.84■■□□□ 1.09
CLTA-202ENST00000345519 DNAJB4Q9UDY4 337 aa21.84■■□□□ 1.09
CLTA-202ENST00000345519 TNFSF13BQ9Y275 285 aa21.84■■□□□ 1.09
CLTA-202ENST00000345519 K7ERI5 159 aa21.83■■□□□ 1.09
CLTA-202ENST00000345519 ABLIM1O14639 778 aa21.83■■□□□ 1.09
CLTA-202ENST00000345519 ZC3H11AO75152 810 aaKnown RBP eCLIP21.83■■□□□ 1.09
CLTA-202ENST00000345519 BRD1O95696 1058 aa21.83■■□□□ 1.09
CLTA-202ENST00000345519 SCP2P22307 547 aa21.83■■□□□ 1.09
CLTA-202ENST00000345519 MLH1P40692 756 aa21.83■■□□□ 1.09
CLTA-202ENST00000345519 NCKAP1LP55160 1127 aa21.83■■□□□ 1.09
CLTA-202ENST00000345519 PKP1Q13835 747 aa21.83■■□□□ 1.09
CLTA-202ENST00000345519 DCAF4L1Q3SXM0 396 aa21.83■■□□□ 1.09
CLTA-202ENST00000345519 ADGRD2Q7Z7M1 963 aa21.83■■□□□ 1.09
CLTA-202ENST00000345519 COLGALT2Q8IYK4 626 aa21.83■■□□□ 1.09
CLTA-202ENST00000345519 KRI1Q8N9T8 703 aaKnown RBP21.83■■□□□ 1.09
CLTA-202ENST00000345519 PPP2R3CQ969Q6 453 aa21.83■■□□□ 1.09
CLTA-202ENST00000345519 CLIC6Q96NY7 704 aa21.83■■□□□ 1.09
CLTA-202ENST00000345519 GAD1Q99259 594 aa21.83■■□□□ 1.09
CLTA-202ENST00000345519 ACO2Q99798 780 aaKnown RBP21.83■■□□□ 1.09
CLTA-202ENST00000345519 REEP2Q9BRK0 252 aa21.83■■□□□ 1.09
CLTA-202ENST00000345519 KMT5AQ9NQR1 393 aa21.83■■□□□ 1.09
CLTA-202ENST00000345519 STK39Q9UEW8 545 aa21.83■■□□□ 1.09
CLTA-202ENST00000345519 INPP5FQ9Y2H2 1132 aa21.83■■□□□ 1.09
CLTA-202ENST00000345519 IRAK3Q9Y616 596 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms