RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 RGMBQ6NW40 437 aa13.92□□□□□ -0.18
CLK3-201ENST00000345005 PCIF1Q9H4Z3 704 aa13.92□□□□□ -0.18
CLK3-201ENST00000345005 NHEJ1Q9H9Q4 299 aaPredicted RBP13.92□□□□□ -0.18
CLK3-201ENST00000345005 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.92□□□□□ -0.18
CLK3-201ENST00000345005 ARHGAP28Q9P2N2 729 aa13.92□□□□□ -0.18
CLK3-201ENST00000345005 LRRC53A6NM62 1247 aa13.91□□□□□ -0.18
CLK3-201ENST00000345005 CLGNO14967 610 aa13.91□□□□□ -0.18
CLK3-201ENST00000345005 GAS2O43903 313 aaKnown RBP13.91□□□□□ -0.18
CLK3-201ENST00000345005 GH1P01241 217 aa13.91□□□□□ -0.18
CLK3-201ENST00000345005 PON1P27169 355 aa13.91□□□□□ -0.18
CLK3-201ENST00000345005 NAMPTP43490 491 aa13.91□□□□□ -0.18
CLK3-201ENST00000345005 NOP2P46087 812 aaKnown RBP13.91□□□□□ -0.18
CLK3-201ENST00000345005 SAPCD2Q86UD0 394 aa13.91□□□□□ -0.18
CLK3-201ENST00000345005 PLCD3Q8N3E9 789 aa13.91□□□□□ -0.18
CLK3-201ENST00000345005 ACRBPQ8NEB7 543 aa13.91□□□□□ -0.18
CLK3-201ENST00000345005 ATP8B4Q8TF62 1192 aa13.91□□□□□ -0.18
CLK3-201ENST00000345005 COPS5Q92905 334 aa13.91□□□□□ -0.18
CLK3-201ENST00000345005 TMEM143Q96AN5 459 aa13.91□□□□□ -0.18
CLK3-201ENST00000345005 CBWD1Q9BRT8 395 aa13.91□□□□□ -0.18
CLK3-201ENST00000345005 KIFC3Q9BVG8 833 aa13.91□□□□□ -0.18
CLK3-201ENST00000345005 GANQ9H2C0 597 aa13.91□□□□□ -0.18
CLK3-201ENST00000345005 EIF3CLB5ME19 914 aaKnown RBP13.9□□□□□ -0.18
CLK3-201ENST00000345005 TISP43B9A030 160 aa13.9□□□□□ -0.18
CLK3-201ENST00000345005 ANKRD63C9JTQ0 380 aa13.9□□□□□ -0.18
CLK3-201ENST00000345005 CLSTN1O94985 981 aa13.9□□□□□ -0.18
CLK3-201ENST00000345005 FMO5P49326 533 aa13.9□□□□□ -0.18
CLK3-201ENST00000345005 STRN3Q13033 797 aa13.9□□□□□ -0.18
CLK3-201ENST00000345005 TAF1CQ15572 869 aaPredicted RBP13.9□□□□□ -0.18
CLK3-201ENST00000345005 SFMBT2Q5VUG0 894 aa13.9□□□□□ -0.18
CLK3-201ENST00000345005 RDH13Q8NBN7 331 aa13.9□□□□□ -0.18
CLK3-201ENST00000345005 TCP11Q8WWU5 503 aa13.9□□□□□ -0.18
CLK3-201ENST00000345005 EMID1Q96A84 441 aaPredicted RBP13.9□□□□□ -0.18
CLK3-201ENST00000345005 MAML3Q96JK9 1138 aa13.9□□□□□ -0.18
CLK3-201ENST00000345005 CCDC42Q96M95 316 aa13.9□□□□□ -0.18
CLK3-201ENST00000345005 EIF3CQ99613 913 aaKnown RBP13.9□□□□□ -0.18
CLK3-201ENST00000345005 JPH2Q9BR39 696 aaPredicted RBP13.9□□□□□ -0.18
CLK3-201ENST00000345005 NLRC4Q9NPP4 1024 aa13.9□□□□□ -0.18
CLK3-201ENST00000345005 FBXL5Q9UKA1 691 aa13.9□□□□□ -0.18
CLK3-201ENST00000345005 IGF2BP3O00425 579 aaKnown RBP eCLIP13.9□□□□□ -0.18
CLK3-201ENST00000345005 HBP1O60381 514 aa13.9□□□□□ -0.18
CLK3-201ENST00000345005 N4BP1O75113 896 aaKnown RBP13.9□□□□□ -0.18
CLK3-201ENST00000345005 SNAI1O95863 264 aaPredicted RBP13.9□□□□□ -0.18
CLK3-201ENST00000345005 PRLRP16471 622 aa13.9□□□□□ -0.18
CLK3-201ENST00000345005 SLC9A1P19634 815 aa13.9□□□□□ -0.18
CLK3-201ENST00000345005 GARTP22102 1010 aa13.9□□□□□ -0.18
CLK3-201ENST00000345005 GLRA2P23416 452 aa13.9□□□□□ -0.18
CLK3-201ENST00000345005 VAMP7P51809 220 aa13.9□□□□□ -0.18
CLK3-201ENST00000345005 MCCD1P59942 119 aaPredicted RBP13.9□□□□□ -0.18
CLK3-201ENST00000345005 HTRA3P83110 453 aa13.9□□□□□ -0.18
CLK3-201ENST00000345005 ARHGAP1Q07960 439 aa13.9□□□□□ -0.18
CLK3-201ENST00000345005 PLCB4Q15147 1175 aa13.9□□□□□ -0.18
CLK3-201ENST00000345005 DNAJC21Q5F1R6 531 aaKnown RBP13.9□□□□□ -0.18
CLK3-201ENST00000345005 CCDC122Q5T0U0 273 aa13.9□□□□□ -0.18
CLK3-201ENST00000345005 KLHDC7AQ5VTJ3 777 aa13.9□□□□□ -0.18
CLK3-201ENST00000345005 IER5Q5VY09 327 aa13.9□□□□□ -0.18
CLK3-201ENST00000345005 ADGRA3Q8IWK6 1321 aa13.9□□□□□ -0.18
CLK3-201ENST00000345005 SMC1BQ8NDV3 1235 aa13.9□□□□□ -0.18
CLK3-201ENST00000345005 DEPTORQ8TB45 409 aa13.9□□□□□ -0.18
CLK3-201ENST00000345005 COG1Q8WTW3 980 aa13.9□□□□□ -0.18
CLK3-201ENST00000345005 ADGRA2Q96PE1 1338 aa13.9□□□□□ -0.18
CLK3-201ENST00000345005 TINF2Q9BSI4 451 aa13.9□□□□□ -0.18
CLK3-201ENST00000345005 ABHD16BQ9H3Z7 469 aa13.9□□□□□ -0.18
CLK3-201ENST00000345005 GCNT4Q9P109 453 aa13.9□□□□□ -0.18
CLK3-201ENST00000345005 CPA4Q9UI42 421 aa13.9□□□□□ -0.18
CLK3-201ENST00000345005 DAAM1Q9Y4D1 1078 aa13.9□□□□□ -0.18
CLK3-201ENST00000345005 PASKQ96RG2 1323 aa13.89□□□□□ -0.19
CLK3-201ENST00000345005 UCHL3P15374 230 aa13.89□□□□□ -0.19
CLK3-201ENST00000345005 ADSSP30520 456 aa13.89□□□□□ -0.19
CLK3-201ENST00000345005 CETN1Q12798 172 aa13.89□□□□□ -0.19
CLK3-201ENST00000345005 DPY19L2P1Q6NXN4 242 aa13.89□□□□□ -0.19
CLK3-201ENST00000345005 KIAA1328Q86T90 577 aa13.89□□□□□ -0.19
CLK3-201ENST00000345005 EFCAB13Q8IY85 973 aa13.89□□□□□ -0.19
CLK3-201ENST00000345005 C10orf67Q8IYJ2 551 aa13.89□□□□□ -0.19
CLK3-201ENST00000345005 ASAP3Q8TDY4 903 aa13.89□□□□□ -0.19
CLK3-201ENST00000345005 BICD1Q96G01 975 aa13.89□□□□□ -0.19
CLK3-201ENST00000345005 KATNBL1Q9H079 304 aa13.89□□□□□ -0.19
CLK3-201ENST00000345005 TMEM134Q9H6X4 195 aa13.89□□□□□ -0.19
CLK3-201ENST00000345005 ERAP1Q9NZ08 941 aa13.89□□□□□ -0.19
CLK3-201ENST00000345005 AIPL1Q9NZN9 384 aa13.89□□□□□ -0.19
CLK3-201ENST00000345005 GUCA1BQ9UMX6 200 aa13.89□□□□□ -0.19
CLK3-201ENST00000345005 SSU72P8A0A1W2PR75 194 aa13.88□□□□□ -0.19
CLK3-201ENST00000345005 LRRIQ4A6NIV6 560 aa13.88□□□□□ -0.19
CLK3-201ENST00000345005 K7ERI5 159 aa13.88□□□□□ -0.19
CLK3-201ENST00000345005 HNRNPDLO14979 420 aaKnown RBP13.88□□□□□ -0.19
CLK3-201ENST00000345005 P4HA2O15460 535 aa13.88□□□□□ -0.19
CLK3-201ENST00000345005 RNF40O75150 1001 aa13.88□□□□□ -0.19
CLK3-201ENST00000345005 SERPING1P05155 500 aa13.88□□□□□ -0.19
CLK3-201ENST00000345005 SLC10A3P09131 477 aa13.88□□□□□ -0.19
CLK3-201ENST00000345005 MARK3P27448 753 aa13.88□□□□□ -0.19
CLK3-201ENST00000345005 CORO7P57737 925 aa13.88□□□□□ -0.19
CLK3-201ENST00000345005 MYL7Q01449 175 aa13.88□□□□□ -0.19
CLK3-201ENST00000345005 MAPK8IP2Q13387 824 aaPredicted RBP13.88□□□□□ -0.19
CLK3-201ENST00000345005 MXD4Q14582 209 aaPredicted RBP13.88□□□□□ -0.19
CLK3-201ENST00000345005 SPA17Q15506 151 aa13.88□□□□□ -0.19
CLK3-201ENST00000345005 SLC9C1Q4G0N8 1177 aa13.88□□□□□ -0.19
CLK3-201ENST00000345005 TMEM63BQ5T3F8 832 aa13.88□□□□□ -0.19
CLK3-201ENST00000345005 ICE2Q659A1 982 aa13.88□□□□□ -0.19
CLK3-201ENST00000345005 IQSEC1Q6DN90 963 aa13.88□□□□□ -0.19
CLK3-201ENST00000345005 USP37Q86T82 979 aa13.88□□□□□ -0.19
CLK3-201ENST00000345005 TRIM50Q86XT4 487 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms