RNA–Protein interactions for RNA: ENST00000344937.11

CLCN2-202, Transcript of chloride voltage-gated channel 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLCN2, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-202ENST00000344937 MARCKSL1P49006 195 aa16.9■□□□□ 0.3
CLCN2-202ENST00000344937 DRAP1Q14919 205 aaPredicted RBP16.9■□□□□ 0.3
CLCN2-202ENST00000344937 EMC10Q5UCC4 262 aa16.9■□□□□ 0.3
CLCN2-202ENST00000344937 CAPRIN2Q6IMN6 1127 aaKnown RBP16.9■□□□□ 0.3
CLCN2-202ENST00000344937 LNX1Q8TBB1 728 aaPredicted RBP16.9■□□□□ 0.3
CLCN2-202ENST00000344937 SH2D3AQ9BRG2 576 aa16.9■□□□□ 0.3
CLCN2-202ENST00000344937 ACP6Q9NPH0 428 aa16.9■□□□□ 0.3
CLCN2-202ENST00000344937 PKD2L1Q9P0L9 805 aa16.9■□□□□ 0.3
CLCN2-202ENST00000344937 ZNF541Q9H0D2 1346 aa16.9■□□□□ 0.3
CLCN2-202ENST00000344937 EIF4E1BA6NMX2 242 aaKnown RBP16.89■□□□□ 0.3
CLCN2-202ENST00000344937 PECAM1P16284 738 aaPredicted RBP16.89■□□□□ 0.3
CLCN2-202ENST00000344937 KCNJ1P48048 391 aa16.89■□□□□ 0.3
CLCN2-202ENST00000344937 RPS6KA3P51812 740 aa16.89■□□□□ 0.3
CLCN2-202ENST00000344937 SLC29A2Q14542 456 aa16.89■□□□□ 0.3
CLCN2-202ENST00000344937 THEMIS2Q5TEJ8 643 aa16.89■□□□□ 0.3
CLCN2-202ENST00000344937 CCDC174Q6PII3 467 aa16.89■□□□□ 0.3
CLCN2-202ENST00000344937 FBXO11Q86XK2 927 aa16.89■□□□□ 0.3
CLCN2-202ENST00000344937 CPNE8Q86YQ8 564 aa16.89■□□□□ 0.3
CLCN2-202ENST00000344937 TMX2Q9Y320 296 aa16.89■□□□□ 0.3
CLCN2-202ENST00000344937 DAAM1Q9Y4D1 1078 aa16.89■□□□□ 0.3
CLCN2-202ENST00000344937 COL2A1P02458 1487 aaPredicted RBP16.89■□□□□ 0.29
CLCN2-202ENST00000344937 SLC12A3P55017 1021 aa16.89■□□□□ 0.29
CLCN2-202ENST00000344937 DCAF12L1Q5VU92 463 aa16.89■□□□□ 0.29
CLCN2-202ENST00000344937 FKBP1CQ5VVH2 108 aa16.89■□□□□ 0.29
CLCN2-202ENST00000344937 EPS8L3Q8TE67 593 aaKnown RBP16.89■□□□□ 0.29
CLCN2-202ENST00000344937 SLC35C1Q96A29 364 aa16.89■□□□□ 0.29
CLCN2-202ENST00000344937 PRMT1Q99873 361 aaKnown RBP16.89■□□□□ 0.29
CLCN2-202ENST00000344937 DNAJC12Q9UKB3 198 aa16.89■□□□□ 0.29
CLCN2-202ENST00000344937 TRPC6Q9Y210 931 aa16.89■□□□□ 0.29
CLCN2-202ENST00000344937 KDM3AQ9Y4C1 1321 aa16.89■□□□□ 0.29
CLCN2-202ENST00000344937 MEIS2O14770 477 aa16.89■□□□□ 0.29
CLCN2-202ENST00000344937 AMNQ9BXJ7 453 aa16.89■□□□□ 0.29
CLCN2-202ENST00000344937 SEMA4AQ9H3S1 761 aa16.89■□□□□ 0.29
CLCN2-202ENST00000344937 EBF2Q9HAK2 575 aa16.89■□□□□ 0.29
CLCN2-202ENST00000344937 BIRC3Q13489 604 aa16.88■□□□□ 0.29
CLCN2-202ENST00000344937 EPHA7Q15375 998 aa16.88■□□□□ 0.29
CLCN2-202ENST00000344937 PPP1R18Q6NYC8 613 aa16.88■□□□□ 0.29
CLCN2-202ENST00000344937 PHLDB2Q86SQ0 1253 aa16.88■□□□□ 0.29
CLCN2-202ENST00000344937 DYDC1Q8WWB3 177 aa16.88■□□□□ 0.29
CLCN2-202ENST00000344937 ALG3Q92685 438 aa16.88■□□□□ 0.29
CLCN2-202ENST00000344937 BTBD6Q96KE9 485 aa16.88■□□□□ 0.29
CLCN2-202ENST00000344937 CTTNBP2NLQ9P2B4 639 aa16.88■□□□□ 0.29
CLCN2-202ENST00000344937 HACL1Q9UJ83 578 aa16.88■□□□□ 0.29
CLCN2-202ENST00000344937 RGS16O15492 202 aaPredicted RBP16.88■□□□□ 0.29
CLCN2-202ENST00000344937 STAT2P52630 851 aa16.88■□□□□ 0.29
CLCN2-202ENST00000344937 ELF3P78545 371 aaPredicted RBP16.88■□□□□ 0.29
CLCN2-202ENST00000344937 BYSLQ13895 437 aaKnown RBP16.88■□□□□ 0.29
CLCN2-202ENST00000344937 DENND2CQ68D51 928 aa16.88■□□□□ 0.29
CLCN2-202ENST00000344937 MIS18BP1Q6P0N0 1132 aa16.88■□□□□ 0.29
CLCN2-202ENST00000344937 LRIG3Q6UXM1 1119 aa16.88■□□□□ 0.29
CLCN2-202ENST00000344937 KRT35Q92764 455 aa16.88■□□□□ 0.29
CLCN2-202ENST00000344937 TEPSINQ96N21 525 aa16.88■□□□□ 0.29
CLCN2-202ENST00000344937 PCIF1Q9H4Z3 704 aa16.88■□□□□ 0.29
CLCN2-202ENST00000344937 ARFGEF1Q9Y6D6 1849 aa16.88■□□□□ 0.29
CLCN2-202ENST00000344937 CALUO43852 315 aaPredicted RBP16.87■□□□□ 0.29
CLCN2-202ENST00000344937 TNFAIP3P21580 790 aa16.87■□□□□ 0.29
CLCN2-202ENST00000344937 RAB27AP51159 221 aa16.87■□□□□ 0.29
CLCN2-202ENST00000344937 ZNF280AP59817 542 aaPredicted RBP16.87■□□□□ 0.29
CLCN2-202ENST00000344937 ARHGAP4P98171 946 aa16.87■□□□□ 0.29
CLCN2-202ENST00000344937 MESDQ14696 234 aa16.87■□□□□ 0.29
CLCN2-202ENST00000344937 ARMC3Q5W041 872 aa16.87■□□□□ 0.29
CLCN2-202ENST00000344937 FAM186BQ8IYM0 893 aa16.87■□□□□ 0.29
CLCN2-202ENST00000344937 XPO6Q96QU8 1125 aaKnown RBP16.87■□□□□ 0.29
CLCN2-202ENST00000344937 FAM86B1E9PN63 330 aa16.87■□□□□ 0.29
CLCN2-202ENST00000344937 FAM86B2P0C5J1 330 aa16.87■□□□□ 0.29
CLCN2-202ENST00000344937 VPS41P49754 854 aa16.87■□□□□ 0.29
CLCN2-202ENST00000344937 TRAF1Q13077 416 aa16.87■□□□□ 0.29
CLCN2-202ENST00000344937 MTMR3Q13615 1198 aa16.87■□□□□ 0.29
CLCN2-202ENST00000344937 NBPF12Q5TAG4 269 aaPredicted RBP16.87■□□□□ 0.29
CLCN2-202ENST00000344937 LRRC34Q8IZ02 419 aa16.87■□□□□ 0.29
CLCN2-202ENST00000344937 ANKRD42Q8N9B4 389 aa16.87■□□□□ 0.29
CLCN2-202ENST00000344937 SLC20A1Q8WUM9 679 aa16.87■□□□□ 0.29
CLCN2-202ENST00000344937 CHMP6Q96FZ7 201 aa16.87■□□□□ 0.29
CLCN2-202ENST00000344937 ZNF341Q9BYN7 854 aa16.87■□□□□ 0.29
CLCN2-202ENST00000344937 FZD9O00144 591 aa16.87■□□□□ 0.29
CLCN2-202ENST00000344937 SMNDC1O75940 238 aaKnown RBP eCLIP16.87■□□□□ 0.29
CLCN2-202ENST00000344937 FAM13AO94988 1023 aa16.87■□□□□ 0.29
CLCN2-202ENST00000344937 CBWD6Q4V339 395 aa16.87■□□□□ 0.29
CLCN2-202ENST00000344937 CBWD3Q5JTY5 395 aa16.87■□□□□ 0.29
CLCN2-202ENST00000344937 CBWD5Q5RIA9 395 aa16.87■□□□□ 0.29
CLCN2-202ENST00000344937 ARHGAP27Q6ZUM4 889 aa16.87■□□□□ 0.29
CLCN2-202ENST00000344937 POP1Q99575 1024 aaKnown RBP16.87■□□□□ 0.29
CLCN2-202ENST00000344937 SIX2Q9NPC8 291 aa16.87■□□□□ 0.29
CLCN2-202ENST00000344937 L3MBTL1Q9Y468 752 aa16.87■□□□□ 0.29
CLCN2-202ENST00000344937 CCDC188H7C350 402 aa16.86■□□□□ 0.29
CLCN2-202ENST00000344937 PMS2P54278 862 aa16.86■□□□□ 0.29
CLCN2-202ENST00000344937 TRIP13Q15645 432 aaPredicted RBP16.86■□□□□ 0.29
CLCN2-202ENST00000344937 YIPF3Q9GZM5 350 aa16.86■□□□□ 0.29
CLCN2-202ENST00000344937 DEFB129Q9H1M3 183 aa16.86■□□□□ 0.29
CLCN2-202ENST00000344937 HOMER3Q9NSC5 361 aa16.86■□□□□ 0.29
CLCN2-202ENST00000344937 INTS9Q9NV88 658 aaKnown RBP16.86■□□□□ 0.29
CLCN2-202ENST00000344937 C15orf41Q9Y2V0 281 aa16.86■□□□□ 0.29
CLCN2-202ENST00000344937 BZW2Q9Y6E2 419 aaKnown RBP16.86■□□□□ 0.29
CLCN2-202ENST00000344937 ASTN1O14525 1302 aa16.86■□□□□ 0.29
CLCN2-202ENST00000344937 TISP43B9A030 160 aa16.86■□□□□ 0.29
CLCN2-202ENST00000344937 DDX39AO00148 427 aaKnown RBP16.86■□□□□ 0.29
CLCN2-202ENST00000344937 EML1O00423 815 aa16.86■□□□□ 0.29
CLCN2-202ENST00000344937 TBC1D12O60347 775 aa16.86■□□□□ 0.29
CLCN2-202ENST00000344937 ACSL3O95573 720 aa16.86■□□□□ 0.29
CLCN2-202ENST00000344937 FRMD5Q7Z6J6 570 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms