RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 EFCAB8A8MWE9 144 aa8.07□□□□□ -1.12
ZNF540-202ENST00000343599 CHURC1-FNTBB4DL54 471 aa8.07□□□□□ -1.12
ZNF540-202ENST00000343599 TADA3O75528 432 aa8.07□□□□□ -1.12
ZNF540-202ENST00000343599 KRT17Q04695 432 aa8.07□□□□□ -1.12
ZNF540-202ENST00000343599 TSR1Q2NL82 804 aaKnown RBP8.07□□□□□ -1.12
ZNF540-202ENST00000343599 TBC1D25Q3MII6 688 aa8.07□□□□□ -1.12
ZNF540-202ENST00000343599 ABHD15Q6UXT9 468 aa8.07□□□□□ -1.12
ZNF540-202ENST00000343599 ARMC2Q8NEN0 867 aa8.07□□□□□ -1.12
ZNF540-202ENST00000343599 N4BP2L2Q92802 583 aaPredicted RBP8.07□□□□□ -1.12
ZNF540-202ENST00000343599 ZNF558Q96NG5 402 aa8.07□□□□□ -1.12
ZNF540-202ENST00000343599 CASD1Q96PB1 797 aa8.07□□□□□ -1.12
ZNF540-202ENST00000343599 MXRA8Q9BRK3 442 aa8.07□□□□□ -1.12
ZNF540-202ENST00000343599 CYP26B1Q9NR63 512 aa8.07□□□□□ -1.12
ZNF540-202ENST00000343599 TRMT13Q9NUP7 481 aaKnown RBP8.07□□□□□ -1.12
ZNF540-202ENST00000343599 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.07□□□□□ -1.12
ZNF540-202ENST00000343599 STK36Q9NRP7 1315 aa8.07□□□□□ -1.12
ZNF540-202ENST00000343599 ZNF318Q5VUA4 2279 aa8.07□□□□□ -1.12
ZNF540-202ENST00000343599 A0A0U1RQF3 1178 aa8.06□□□□□ -1.12
ZNF540-202ENST00000343599 NCAM2O15394 837 aa8.06□□□□□ -1.12
ZNF540-202ENST00000343599 NRDCO43847 1150 aa8.06□□□□□ -1.12
ZNF540-202ENST00000343599 CLASP2O75122 1294 aaKnown RBP8.06□□□□□ -1.12
ZNF540-202ENST00000343599 TBX10O75333 385 aa8.06□□□□□ -1.12
ZNF540-202ENST00000343599 CHRNA1P02708 482 aa8.06□□□□□ -1.12
ZNF540-202ENST00000343599 ALAS1P13196 640 aa8.06□□□□□ -1.12
ZNF540-202ENST00000343599 MAGEA8P43361 318 aa8.06□□□□□ -1.12
ZNF540-202ENST00000343599 MCM2P49736 904 aa8.06□□□□□ -1.12
ZNF540-202ENST00000343599 CAMK1Q14012 370 aa8.06□□□□□ -1.12
ZNF540-202ENST00000343599 KIAA0319Q5VV43 1072 aa8.06□□□□□ -1.12
ZNF540-202ENST00000343599 DRAXINQ8NBI3 349 aaPredicted RBP8.06□□□□□ -1.12
ZNF540-202ENST00000343599 ACSF2Q96CM8 615 aaPredicted RBP8.06□□□□□ -1.12
ZNF540-202ENST00000343599 ZC3H10Q96K80 434 aaKnown RBP8.06□□□□□ -1.12
ZNF540-202ENST00000343599 FSD1Q9BTV5 496 aa8.06□□□□□ -1.12
ZNF540-202ENST00000343599 USP15Q9Y4E8 981 aaPredicted RBP8.06□□□□□ -1.12
ZNF540-202ENST00000343599 PPFIA2O75334 1257 aa8.06□□□□□ -1.12
ZNF540-202ENST00000343599 ARIH2O95376 493 aa8.06□□□□□ -1.12
ZNF540-202ENST00000343599 PLD1Q13393 1074 aa8.06□□□□□ -1.12
ZNF540-202ENST00000343599 CCDC84Q86UT8 332 aaPredicted RBP8.06□□□□□ -1.12
ZNF540-202ENST00000343599 PNMA1Q8ND90 353 aa8.06□□□□□ -1.12
ZNF540-202ENST00000343599 ATP6V0A1Q93050 837 aa8.06□□□□□ -1.12
ZNF540-202ENST00000343599 THOC1Q96FV9 657 aaKnown RBP8.06□□□□□ -1.12
ZNF540-202ENST00000343599 ADAMTS10Q9H324 1103 aa8.06□□□□□ -1.12
ZNF540-202ENST00000343599 SUDS3Q9H7L9 328 aaPredicted RBP8.06□□□□□ -1.12
ZNF540-202ENST00000343599 SCUBE2Q9NQ36 999 aa8.06□□□□□ -1.12
ZNF540-202ENST00000343599 GDE1Q9NZC3 331 aa8.06□□□□□ -1.12
ZNF540-202ENST00000343599 CPSF2Q9P2I0 782 aaKnown RBP8.06□□□□□ -1.12
ZNF540-202ENST00000343599 SMC3Q9UQE7 1217 aa8.06□□□□□ -1.12
ZNF540-202ENST00000343599 MRPS17Q9Y2R5 130 aaKnown RBP8.06□□□□□ -1.12
ZNF540-202ENST00000343599 SNUPNO95149 360 aaKnown RBP8.06□□□□□ -1.12
ZNF540-202ENST00000343599 CD151P48509 253 aa8.06□□□□□ -1.12
ZNF540-202ENST00000343599 TDGQ13569 410 aa8.06□□□□□ -1.12
ZNF540-202ENST00000343599 KRT32Q14532 448 aa8.06□□□□□ -1.12
ZNF540-202ENST00000343599 QRICH1Q2TAL8 776 aa8.06□□□□□ -1.12
ZNF540-202ENST00000343599 XKR4Q5GH76 650 aa8.06□□□□□ -1.12
ZNF540-202ENST00000343599 CWF19L1Q69YN2 538 aaKnown RBP8.06□□□□□ -1.12
ZNF540-202ENST00000343599 MTHFD1LQ6UB35 978 aa8.06□□□□□ -1.12
ZNF540-202ENST00000343599 TRIM74Q86UV6 250 aa8.06□□□□□ -1.12
ZNF540-202ENST00000343599 TRIM73Q86UV7 250 aa8.06□□□□□ -1.12
ZNF540-202ENST00000343599 C2orf15Q8WU43 125 aaKnown RBP8.06□□□□□ -1.12
ZNF540-202ENST00000343599 IFIH1Q9BYX4 1025 aaKnown RBP8.06□□□□□ -1.12
ZNF540-202ENST00000343599 FAM124BQ9H5Z6 455 aaPredicted RBP8.06□□□□□ -1.12
ZNF540-202ENST00000343599 BCAS3Q9H6U6 928 aa8.06□□□□□ -1.12
ZNF540-202ENST00000343599 ZSCAN32Q9NX65 697 aa8.06□□□□□ -1.12
ZNF540-202ENST00000343599 EVLQ9UI08 416 aaPredicted RBP8.06□□□□□ -1.12
ZNF540-202ENST00000343599 NOD1Q9Y239 953 aa8.06□□□□□ -1.12
ZNF540-202ENST00000343599 GSTTP1A0A1W2PQM5 241 aa8.05□□□□□ -1.12
ZNF540-202ENST00000343599 GPR32O75388 356 aa8.05□□□□□ -1.12
ZNF540-202ENST00000343599 DDX6P26196 483 aaKnown RBP eCLIP8.05□□□□□ -1.12
ZNF540-202ENST00000343599 CCZ1BP86790 482 aa8.05□□□□□ -1.12
ZNF540-202ENST00000343599 CCZ1P86791 482 aaPredicted RBP8.05□□□□□ -1.12
ZNF540-202ENST00000343599 ENPEPQ07075 957 aa8.05□□□□□ -1.12
ZNF540-202ENST00000343599 TROAPQ12815 778 aa8.05□□□□□ -1.12
ZNF540-202ENST00000343599 GRIK4Q16099 956 aa8.05□□□□□ -1.12
ZNF540-202ENST00000343599 DGKKQ5KSL6 1271 aa8.05□□□□□ -1.12
ZNF540-202ENST00000343599 MIS18BP1Q6P0N0 1132 aa8.05□□□□□ -1.12
ZNF540-202ENST00000343599 AGMOQ6ZNB7 445 aa8.05□□□□□ -1.12
ZNF540-202ENST00000343599 ZNF280BQ86YH2 543 aa8.05□□□□□ -1.12
ZNF540-202ENST00000343599 DRC7Q8IY82 874 aa8.05□□□□□ -1.12
ZNF540-202ENST00000343599 STK32AQ8WU08 396 aa8.05□□□□□ -1.12
ZNF540-202ENST00000343599 DEPDC1BQ8WUY9 529 aa8.05□□□□□ -1.12
ZNF540-202ENST00000343599 TCP11Q8WWU5 503 aa8.05□□□□□ -1.12
ZNF540-202ENST00000343599 NKD2Q969F2 451 aaPredicted RBP8.05□□□□□ -1.12
ZNF540-202ENST00000343599 CCDC34Q96HJ3 373 aa8.05□□□□□ -1.12
ZNF540-202ENST00000343599 SPOCK3Q9BQ16 436 aa8.05□□□□□ -1.12
ZNF540-202ENST00000343599 FTOQ9C0B1 505 aaKnown RBP eCLIP8.05□□□□□ -1.12
ZNF540-202ENST00000343599 C8orf33Q9H7E9 229 aaPredicted RBP8.05□□□□□ -1.12
ZNF540-202ENST00000343599 WDR6Q9NNW5 1121 aaKnown RBP8.05□□□□□ -1.12
ZNF540-202ENST00000343599 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.05□□□□□ -1.12
ZNF540-202ENST00000343599 GIT1Q9Y2X7 761 aa8.05□□□□□ -1.12
ZNF540-202ENST00000343599 UMODL1Q5DID0 1318 aa8.05□□□□□ -1.12
ZNF540-202ENST00000343599 GLP2RO95838 553 aa8.05□□□□□ -1.12
ZNF540-202ENST00000343599 ITGB1P05556 798 aa8.05□□□□□ -1.12
ZNF540-202ENST00000343599 ADRB2P07550 413 aa8.05□□□□□ -1.12
ZNF540-202ENST00000343599 SKILP12757 684 aa8.05□□□□□ -1.12
ZNF540-202ENST00000343599 DEFB103AP81534 67 aa8.05□□□□□ -1.12
ZNF540-202ENST00000343599 RBBP5Q15291 538 aaKnown RBP8.05□□□□□ -1.12
ZNF540-202ENST00000343599 CES5AQ6NT32 575 aa8.05□□□□□ -1.12
ZNF540-202ENST00000343599 PADI6Q6TGC4 694 aa8.05□□□□□ -1.12
ZNF540-202ENST00000343599 LINC01599Q8WXQ3 324 aa8.05□□□□□ -1.12
ZNF540-202ENST00000343599 FERMT2Q96AC1 680 aa8.05□□□□□ -1.12
ZNF540-202ENST00000343599 ELSPBP1Q96BH3 223 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms