RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 USP15Q9Y4E8 981 aaPredicted RBP19.94■□□□□ 0.78
USF2-202ENST00000343550 BRD1O95696 1058 aa19.93■□□□□ 0.78
USF2-202ENST00000343550 PPM1AP35813 382 aa19.93■□□□□ 0.78
USF2-202ENST00000343550 PBX3P40426 434 aa19.93■□□□□ 0.78
USF2-202ENST00000343550 PHKA2P46019 1235 aa19.93■□□□□ 0.78
USF2-202ENST00000343550 KRT17Q04695 432 aa19.93■□□□□ 0.78
USF2-202ENST00000343550 FOXD4L6Q3SYB3 417 aaPredicted RBP19.93■□□□□ 0.78
USF2-202ENST00000343550 HERC4Q5GLZ8 1057 aaPredicted RBP19.93■□□□□ 0.78
USF2-202ENST00000343550 PLPP4Q5VZY2 271 aa19.93■□□□□ 0.78
USF2-202ENST00000343550 RINT1Q6NUQ1 792 aa19.93■□□□□ 0.78
USF2-202ENST00000343550 FOXD4L3Q6VB84 417 aaPredicted RBP19.93■□□□□ 0.78
USF2-202ENST00000343550 C1orf186Q6ZWK4 172 aa19.93■□□□□ 0.78
USF2-202ENST00000343550 CATSPER4Q7RTX7 472 aa19.93■□□□□ 0.78
USF2-202ENST00000343550 SYT2Q8N9I0 419 aaPredicted RBP19.93■□□□□ 0.78
USF2-202ENST00000343550 NFKBIZQ9BYH8 718 aa19.93■□□□□ 0.78
USF2-202ENST00000343550 SPG21Q9NZD8 308 aa19.93■□□□□ 0.78
USF2-202ENST00000343550 DAXXQ9UER7 740 aaPredicted RBP19.93■□□□□ 0.78
USF2-202ENST00000343550 MUTYHQ9UIF7 546 aa19.93■□□□□ 0.78
USF2-202ENST00000343550 ATF7P17544 494 aaPredicted RBP19.92■□□□□ 0.78
USF2-202ENST00000343550 STK38Q15208 465 aa19.92■□□□□ 0.78
USF2-202ENST00000343550 KRI1Q8N9T8 703 aaKnown RBP19.92■□□□□ 0.78
USF2-202ENST00000343550 HELQQ8TDG4 1101 aa19.92■□□□□ 0.78
USF2-202ENST00000343550 NGRNQ9NPE2 291 aaKnown RBP19.92■□□□□ 0.78
USF2-202ENST00000343550 ENTPD7Q9NQZ7 604 aa19.92■□□□□ 0.78
USF2-202ENST00000343550 HOXA11P31270 313 aaPredicted RBP19.92■□□□□ 0.78
USF2-202ENST00000343550 SLC12A3P55017 1021 aa19.92■□□□□ 0.78
USF2-202ENST00000343550 KARSQ15046 597 aaKnown RBP19.92■□□□□ 0.78
USF2-202ENST00000343550 ATL3Q6DD88 541 aa19.92■□□□□ 0.78
USF2-202ENST00000343550 TMEM184AQ6ZMB5 413 aa19.92■□□□□ 0.78
USF2-202ENST00000343550 LRRC15Q8TF66 581 aa19.92■□□□□ 0.78
USF2-202ENST00000343550 BSNDQ8WZ55 320 aa19.92■□□□□ 0.78
USF2-202ENST00000343550 RUSC1Q9BVN2 902 aa19.92■□□□□ 0.78
USF2-202ENST00000343550 TRAIPQ9BWF2 469 aa19.92■□□□□ 0.78
USF2-202ENST00000343550 MYH15Q9Y2K3 1946 aa19.91■□□□□ 0.78
USF2-202ENST00000343550 HIDE1A8MVS5 230 aa19.91■□□□□ 0.78
USF2-202ENST00000343550 LOC730098B7Z3J9 87 aa19.91■□□□□ 0.78
USF2-202ENST00000343550 SPTLC2O15270 562 aa19.91■□□□□ 0.78
USF2-202ENST00000343550 PPP6R2O75170 966 aa19.91■□□□□ 0.78
USF2-202ENST00000343550 YEATS4O95619 227 aa19.91■□□□□ 0.78
USF2-202ENST00000343550 PLA2G4BP0C869 781 aa19.91■□□□□ 0.78
USF2-202ENST00000343550 KCNC3Q14003 757 aa19.91■□□□□ 0.78
USF2-202ENST00000343550 PCBP1Q15365 356 aaKnown RBP eCLIP19.91■□□□□ 0.782e-6■■■■□ 23
USF2-202ENST00000343550 KIFAP3Q92845 792 aa19.91■□□□□ 0.78
USF2-202ENST00000343550 MRPL9Q9BYD2 267 aaKnown RBP19.91■□□□□ 0.78
USF2-202ENST00000343550 BLOC1S4Q9NUP1 217 aa19.91■□□□□ 0.78
USF2-202ENST00000343550 PIN4Q9Y237 131 aaKnown RBP19.91■□□□□ 0.78
USF2-202ENST00000343550 LRRIQ4A6NIV6 560 aa19.9■□□□□ 0.78
USF2-202ENST00000343550 INO80B-WBP1J3KQ70 363 aa19.9■□□□□ 0.78
USF2-202ENST00000343550 SSBP05455 408 aaKnown RBP eCLIP19.9■□□□□ 0.78
USF2-202ENST00000343550 SRGAP2BP0DMP2 458 aa19.9■□□□□ 0.78
USF2-202ENST00000343550 PLCG1P19174 1290 aa19.9■□□□□ 0.78
USF2-202ENST00000343550 MBTD1Q05BQ5 628 aa19.9■□□□□ 0.78
USF2-202ENST00000343550 TWF2Q6IBS0 349 aaKnown RBP19.9■□□□□ 0.78
USF2-202ENST00000343550 TMC7Q7Z402 723 aa19.9■□□□□ 0.78
USF2-202ENST00000343550 SLC39A11Q8N1S5 342 aa19.9■□□□□ 0.78
USF2-202ENST00000343550 PHF7Q9BWX1 381 aaPredicted RBP19.9■□□□□ 0.78
USF2-202ENST00000343550 AGPAT5Q9NUQ2 364 aa19.9■□□□□ 0.78
USF2-202ENST00000343550 GUCY2CP25092 1073 aa19.89■□□□□ 0.77
USF2-202ENST00000343550 DDIT3P35638 169 aa19.89■□□□□ 0.77
USF2-202ENST00000343550 NAMPTP43490 491 aa19.89■□□□□ 0.77
USF2-202ENST00000343550 ALDH7A1P49419 539 aaKnown RBP19.89■□□□□ 0.77
USF2-202ENST00000343550 DNM1Q05193 864 aaKnown RBP19.89■□□□□ 0.77
USF2-202ENST00000343550 ARSHQ5FYA8 562 aa19.89■□□□□ 0.77
USF2-202ENST00000343550 DAW1Q8N136 415 aa19.89■□□□□ 0.77
USF2-202ENST00000343550 RASSF8Q8NHQ8 419 aa19.89■□□□□ 0.77
USF2-202ENST00000343550 SUSD6Q92537 303 aa19.89■□□□□ 0.77
USF2-202ENST00000343550 EDAQ92838 391 aa19.89■□□□□ 0.77
USF2-202ENST00000343550 CFAP45Q9UL16 551 aa19.89■□□□□ 0.77
USF2-202ENST00000343550 HIP1RO75146 1068 aa19.88■□□□□ 0.77
USF2-202ENST00000343550 SKIP12755 728 aa19.88■□□□□ 0.77
USF2-202ENST00000343550 HOXD11P31277 338 aaPredicted RBP19.88■□□□□ 0.77
USF2-202ENST00000343550 BCAR1P56945 870 aa19.88■□□□□ 0.77
USF2-202ENST00000343550 CBX2Q14781 532 aaPredicted RBP19.88■□□□□ 0.77
USF2-202ENST00000343550 PPP2R5AQ15172 486 aa19.88■□□□□ 0.77
USF2-202ENST00000343550 AMHR2Q16671 573 aa19.88■□□□□ 0.77
USF2-202ENST00000343550 CDCA2Q69YH5 1023 aaPredicted RBP19.88■□□□□ 0.77
USF2-202ENST00000343550 ANKRD54Q6NXT1 300 aa19.88■□□□□ 0.77
USF2-202ENST00000343550 LLGL2Q6P1M3 1020 aa19.88■□□□□ 0.77
USF2-202ENST00000343550 MRPL43Q8N983 215 aaKnown RBP19.88■□□□□ 0.77
USF2-202ENST00000343550 RSPH1Q8WYR4 309 aa19.88■□□□□ 0.77
USF2-202ENST00000343550 RPGRIP1Q96KN7 1286 aa19.88■□□□□ 0.77
USF2-202ENST00000343550 IFT74Q96LB3 600 aa19.88■□□□□ 0.77
USF2-202ENST00000343550 TIPINQ9BVW5 301 aa19.88■□□□□ 0.77
USF2-202ENST00000343550 S1PR5Q9H228 398 aa19.88■□□□□ 0.77
USF2-202ENST00000343550 KCND2Q9NZV8 630 aa19.88■□□□□ 0.77
USF2-202ENST00000343550 CCDC39Q9UFE4 941 aa19.88■□□□□ 0.77
USF2-202ENST00000343550 SFI1A8K8P3 1242 aa19.87■□□□□ 0.77
USF2-202ENST00000343550 TSPAN1O60635 241 aa19.87■□□□□ 0.77
USF2-202ENST00000343550 ERLIN2O94905 339 aa19.87■□□□□ 0.77
USF2-202ENST00000343550 AXLP30530 894 aa19.87■□□□□ 0.77
USF2-202ENST00000343550 NCBP1Q09161 790 aaKnown RBP19.87■□□□□ 0.77
USF2-202ENST00000343550 MAPK7Q13164 816 aa19.87■□□□□ 0.77
USF2-202ENST00000343550 MCM6Q14566 821 aa19.87■□□□□ 0.77
USF2-202ENST00000343550 SMC1AQ14683 1233 aaKnown RBP19.87■□□□□ 0.77
USF2-202ENST00000343550 LONRF3Q496Y0 759 aa19.87■□□□□ 0.77
USF2-202ENST00000343550 HFE2Q6ZVN8 426 aa19.87■□□□□ 0.77
USF2-202ENST00000343550 RAD54LQ92698 747 aa19.87■□□□□ 0.77
USF2-202ENST00000343550 LPPQ93052 612 aa19.87■□□□□ 0.77
USF2-202ENST00000343550 FZD8Q9H461 694 aa19.87■□□□□ 0.77
USF2-202ENST00000343550 FAM105AQ9NUU6 356 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms