RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 SCYL2Q6P3W7 929 aa5.09□□□□□ -1.59
CSMD3-203ENST00000343508 TRIM56Q9BRZ2 755 aaKnown RBP5.09□□□□□ -1.59
CSMD3-203ENST00000343508 OSBPL8Q9BZF1 889 aa5.09□□□□□ -1.59
CSMD3-203ENST00000343508 CYP26B1Q9NR63 512 aa5.09□□□□□ -1.59
CSMD3-203ENST00000343508 WHRNQ9P202 907 aa5.09□□□□□ -1.59
CSMD3-203ENST00000343508 ASAP1Q9ULH1 1129 aa5.09□□□□□ -1.59
CSMD3-203ENST00000343508 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.09□□□□□ -1.59
CSMD3-203ENST00000343508 THRAP3Q9Y2W1 955 aaKnown RBP5.09□□□□□ -1.59
CSMD3-203ENST00000343508 ZBTB12Q9Y330 459 aaPredicted RBP5.09□□□□□ -1.59
CSMD3-203ENST00000343508 KPNA7A9QM74 516 aa5.09□□□□□ -1.6
CSMD3-203ENST00000343508 H7C0C1 242 aa5.09□□□□□ -1.6
CSMD3-203ENST00000343508 TOM1L1O75674 476 aa5.09□□□□□ -1.6
CSMD3-203ENST00000343508 PDHBP11177 359 aa5.09□□□□□ -1.6
CSMD3-203ENST00000343508 ATP5OP48047 213 aa5.09□□□□□ -1.6
CSMD3-203ENST00000343508 PHEXP78562 749 aa5.09□□□□□ -1.6
CSMD3-203ENST00000343508 BARGINQ6ZT62 677 aa5.09□□□□□ -1.6
CSMD3-203ENST00000343508 JAMLQ86YT9 394 aa5.09□□□□□ -1.6
CSMD3-203ENST00000343508 ANO3Q9BYT9 981 aa5.09□□□□□ -1.6
CSMD3-203ENST00000343508 TUFT1Q9NNX1 390 aa5.09□□□□□ -1.6
CSMD3-203ENST00000343508 DLGAP2Q9P1A6 1054 aa5.09□□□□□ -1.6
CSMD3-203ENST00000343508 ARHGAP20Q9P2F6 1191 aa5.09□□□□□ -1.6
CSMD3-203ENST00000343508 C15orf41Q9Y2V0 281 aa5.09□□□□□ -1.6
CSMD3-203ENST00000343508 SLIT3O75094 1523 aa5.09□□□□□ -1.6
CSMD3-203ENST00000343508 SFI1A8K8P3 1242 aa5.09□□□□□ -1.6
CSMD3-203ENST00000343508 NMT2O60551 498 aa5.09□□□□□ -1.6
CSMD3-203ENST00000343508 TRPA1O75762 1119 aa5.09□□□□□ -1.6
CSMD3-203ENST00000343508 CENPCQ03188 943 aa5.09□□□□□ -1.6
CSMD3-203ENST00000343508 GPS1Q13098 491 aa5.09□□□□□ -1.6
CSMD3-203ENST00000343508 KSR1Q8IVT5 923 aa5.09□□□□□ -1.6
CSMD3-203ENST00000343508 MDM1Q8TC05 714 aa5.09□□□□□ -1.6
CSMD3-203ENST00000343508 ERP27Q96DN0 273 aa5.09□□□□□ -1.6
CSMD3-203ENST00000343508 PAGR1Q9BTK6 254 aa5.09□□□□□ -1.6
CSMD3-203ENST00000343508 RANBP17Q9H2T7 1088 aaKnown RBP5.09□□□□□ -1.6
CSMD3-203ENST00000343508 SMARCAL1Q9NZC9 954 aa5.09□□□□□ -1.6
CSMD3-203ENST00000343508 A0A0G2JLW4 131 aa5.09□□□□□ -1.6
CSMD3-203ENST00000343508 SMAPO00193 183 aa5.09□□□□□ -1.6
CSMD3-203ENST00000343508 PSMD7P51665 324 aa5.09□□□□□ -1.6
CSMD3-203ENST00000343508 SP4Q02446 784 aa5.09□□□□□ -1.6
CSMD3-203ENST00000343508 HLFQ16534 295 aa5.09□□□□□ -1.6
CSMD3-203ENST00000343508 MFN1Q8IWA4 741 aa5.09□□□□□ -1.6
CSMD3-203ENST00000343508 MAGEC3Q8TD91 643 aa5.09□□□□□ -1.6
CSMD3-203ENST00000343508 ANKRD36BP1Q96IX9 119 aa5.09□□□□□ -1.6
CSMD3-203ENST00000343508 NEU2Q9Y3R4 380 aa5.09□□□□□ -1.6
CSMD3-203ENST00000343508 TESPA1A2RU30 521 aaPredicted RBP5.08□□□□□ -1.6
CSMD3-203ENST00000343508 SNUPNO95149 360 aaKnown RBP5.08□□□□□ -1.6
CSMD3-203ENST00000343508 CRKLP46109 303 aaKnown RBP5.08□□□□□ -1.6
CSMD3-203ENST00000343508 KPNA2P52292 529 aaKnown RBP5.08□□□□□ -1.6
CSMD3-203ENST00000343508 PTENP60484 403 aa5.08□□□□□ -1.6
CSMD3-203ENST00000343508 KYNUQ16719 465 aa5.08□□□□□ -1.6
CSMD3-203ENST00000343508 ADGRF4Q8IZF3 695 aa5.08□□□□□ -1.6
CSMD3-203ENST00000343508 KAZALD1Q96I82 304 aa5.08□□□□□ -1.6
CSMD3-203ENST00000343508 CALN1Q9BXU9 219 aa5.08□□□□□ -1.6
CSMD3-203ENST00000343508 DHX36Q9H2U1 1008 aaKnown RBP5.08□□□□□ -1.6
CSMD3-203ENST00000343508 PPARGC1AQ9UBK2 798 aaKnown RBP5.08□□□□□ -1.6
CSMD3-203ENST00000343508 FAM170AA1A519 330 aa5.08□□□□□ -1.6
CSMD3-203ENST00000343508 POTEFA5A3E0 1075 aa5.08□□□□□ -1.6
CSMD3-203ENST00000343508 POTEIP0CG38 1075 aa5.08□□□□□ -1.6
CSMD3-203ENST00000343508 ARSEP51690 589 aa5.08□□□□□ -1.6
CSMD3-203ENST00000343508 PDIA2Q13087 525 aaKnown RBP5.08□□□□□ -1.6
CSMD3-203ENST00000343508 CYLC2Q14093 348 aaPredicted RBP5.08□□□□□ -1.6
CSMD3-203ENST00000343508 IZUMO3Q5VZ72 239 aa5.08□□□□□ -1.6
CSMD3-203ENST00000343508 CENPPQ6IPU0 288 aa5.08□□□□□ -1.6
CSMD3-203ENST00000343508 POTEEQ6S8J3 1075 aa5.08□□□□□ -1.6
CSMD3-203ENST00000343508 ZBTB10Q96DT7 871 aa5.08□□□□□ -1.6
CSMD3-203ENST00000343508 ZHX2Q9Y6X8 837 aa5.08□□□□□ -1.6
CSMD3-203ENST00000343508 E9PMD0 336 aa5.08□□□□□ -1.6
CSMD3-203ENST00000343508 LIN7AO14910 233 aaPredicted RBP5.08□□□□□ -1.6
CSMD3-203ENST00000343508 TMEM191BP0C7N4 346 aa5.08□□□□□ -1.6
CSMD3-203ENST00000343508 KITP10721 976 aa5.08□□□□□ -1.6
CSMD3-203ENST00000343508 FNTAP49354 379 aa5.08□□□□□ -1.6
CSMD3-203ENST00000343508 TROAPQ12815 778 aa5.08□□□□□ -1.6
CSMD3-203ENST00000343508 RCN1Q15293 331 aa5.08□□□□□ -1.6
CSMD3-203ENST00000343508 SFR1Q86XK3 245 aa5.08□□□□□ -1.6
CSMD3-203ENST00000343508 ZNF677Q86XU0 584 aa5.08□□□□□ -1.6
CSMD3-203ENST00000343508 RBM15Q96T37 977 aaKnown RBP eCLIP5.08□□□□□ -1.6
CSMD3-203ENST00000343508 IRAK4Q9NWZ3 460 aa5.08□□□□□ -1.6
CSMD3-203ENST00000343508 PHTF1Q9UMS5 762 aa5.08□□□□□ -1.6
CSMD3-203ENST00000343508 PCDHGC5Q9Y5F6 944 aa5.08□□□□□ -1.6
CSMD3-203ENST00000343508 AGLP35573 1532 aa5.08□□□□□ -1.6
CSMD3-203ENST00000343508 RGPD8O14715 1765 aaPredicted RBP5.08□□□□□ -1.6
CSMD3-203ENST00000343508 ZNF233A6NK53 670 aa5.08□□□□□ -1.6
CSMD3-203ENST00000343508 PECAM1P16284 738 aaPredicted RBP5.08□□□□□ -1.6
CSMD3-203ENST00000343508 TARSP26639 723 aaKnown RBP5.08□□□□□ -1.6
CSMD3-203ENST00000343508 FMO5P49326 533 aa5.08□□□□□ -1.6
CSMD3-203ENST00000343508 C1orf131Q8NDD1 294 aaKnown RBP5.08□□□□□ -1.6
CSMD3-203ENST00000343508 CMTM5Q96DZ9 223 aa5.08□□□□□ -1.6
CSMD3-203ENST00000343508 TRIM51Q9BSJ1 452 aa5.08□□□□□ -1.6
CSMD3-203ENST00000343508 TIPINQ9BVW5 301 aa5.08□□□□□ -1.6
CSMD3-203ENST00000343508 ANLNQ9NQW6 1124 aa5.08□□□□□ -1.6
CSMD3-203ENST00000343508 ETAA1Q9NY74 926 aa5.08□□□□□ -1.6
CSMD3-203ENST00000343508 A8MXQ7 604 aa5.08□□□□□ -1.6
CSMD3-203ENST00000343508 CALB2P22676 271 aa5.08□□□□□ -1.6
CSMD3-203ENST00000343508 SNRPFP62306 86 aaKnown RBP5.08□□□□□ -1.6
CSMD3-203ENST00000343508 GTF2IP78347 998 aa5.08□□□□□ -1.6
CSMD3-203ENST00000343508 ZCWPW2Q504Y3 356 aa5.08□□□□□ -1.6
CSMD3-203ENST00000343508 SLFN12LQ6IEE8 588 aa5.08□□□□□ -1.6
CSMD3-203ENST00000343508 LZICQ8WZA0 190 aa5.08□□□□□ -1.6
CSMD3-203ENST00000343508 MINPP1Q9UNW1 487 aa5.08□□□□□ -1.6
CSMD3-203ENST00000343508 PYGBP11216 843 aa5.08□□□□□ -1.6
CSMD3-203ENST00000343508 KRT10P13645 584 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms