RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 DEPTORQ8TB45 409 aa20.17■□□□□ 0.82
HOXA9-201ENST00000343483 GLG1Q92896 1179 aa20.17■□□□□ 0.82
HOXA9-201ENST00000343483 UBXN6Q9BZV1 441 aa20.17■□□□□ 0.82
HOXA9-201ENST00000343483 GPR88Q9GZN0 384 aa20.17■□□□□ 0.82
HOXA9-201ENST00000343483 TMEM117Q9H0C3 514 aa20.17■□□□□ 0.82
HOXA9-201ENST00000343483 NAGPAQ9UK23 515 aa20.17■□□□□ 0.82
HOXA9-201ENST00000343483 SNX12Q9UMY4 172 aa20.17■□□□□ 0.82
HOXA9-201ENST00000343483 GLRA2P23416 452 aa20.16■□□□□ 0.82
HOXA9-201ENST00000343483 MARK3P27448 753 aa20.16■□□□□ 0.82
HOXA9-201ENST00000343483 LIG4P49917 911 aa20.16■□□□□ 0.82
HOXA9-201ENST00000343483 MAP2K1Q02750 393 aaPredicted RBP20.16■□□□□ 0.82
HOXA9-201ENST00000343483 STRN3Q13033 797 aa20.16■□□□□ 0.82
HOXA9-201ENST00000343483 GRM1Q13255 1194 aa20.16■□□□□ 0.82
HOXA9-201ENST00000343483 SMC1AQ14683 1233 aaKnown RBP20.16■□□□□ 0.82
HOXA9-201ENST00000343483 NAB2Q15742 525 aa20.16■□□□□ 0.82
HOXA9-201ENST00000343483 HSDL1Q3SXM5 330 aa20.16■□□□□ 0.82
HOXA9-201ENST00000343483 EPC2Q52LR7 807 aa20.16■□□□□ 0.82
HOXA9-201ENST00000343483 ALKBH5Q6P6C2 394 aaKnown RBP20.16■□□□□ 0.82
HOXA9-201ENST00000343483 KCNV1Q6PIU1 500 aa20.16■□□□□ 0.82
HOXA9-201ENST00000343483 AFAP1L1Q8TED9 768 aa20.16■□□□□ 0.82
HOXA9-201ENST00000343483 CEP89Q96ST8 783 aa20.16■□□□□ 0.82
HOXA9-201ENST00000343483 GBA2Q9HCG7 927 aaPredicted RBP20.16■□□□□ 0.82
HOXA9-201ENST00000343483 UBE2TQ9NPD8 197 aaPredicted RBP20.16■□□□□ 0.82
HOXA9-201ENST00000343483 RNF216Q9NWF9 866 aaPredicted RBP20.16■□□□□ 0.82
HOXA9-201ENST00000343483 KCNG1Q9UIX4 513 aa20.16■□□□□ 0.82
HOXA9-201ENST00000343483 PDHXO00330 501 aa20.15■□□□□ 0.82
HOXA9-201ENST00000343483 MAP2K7O14733 419 aa20.15■□□□□ 0.82
HOXA9-201ENST00000343483 RFX1P22670 979 aa20.15■□□□□ 0.82
HOXA9-201ENST00000343483 ANXA13P27216 316 aa20.15■□□□□ 0.82
HOXA9-201ENST00000343483 ABCD1P33897 745 aa20.15■□□□□ 0.82
HOXA9-201ENST00000343483 RFC5P40937 340 aa20.15■□□□□ 0.82
HOXA9-201ENST00000343483 CELF3Q5SZQ8 465 aaKnown RBP20.15■□□□□ 0.82
HOXA9-201ENST00000343483 C10orf76Q5T2E6 689 aa20.15■□□□□ 0.82
HOXA9-201ENST00000343483 WDR93Q6P2C0 686 aa20.15■□□□□ 0.82
HOXA9-201ENST00000343483 HDXQ7Z353 690 aa20.15■□□□□ 0.82
HOXA9-201ENST00000343483 SAPCD2Q86UD0 394 aa20.15■□□□□ 0.82
HOXA9-201ENST00000343483 TRIM50Q86XT4 487 aa20.15■□□□□ 0.82
HOXA9-201ENST00000343483 DNAAF5Q86Y56 855 aa20.15■□□□□ 0.82
HOXA9-201ENST00000343483 GPRC5AQ8NFJ5 357 aa20.15■□□□□ 0.82
HOXA9-201ENST00000343483 POP1Q99575 1024 aaKnown RBP20.15■□□□□ 0.82
HOXA9-201ENST00000343483 FAM213AQ9BRX8 229 aa20.15■□□□□ 0.82
HOXA9-201ENST00000343483 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.15■□□□□ 0.82
HOXA9-201ENST00000343483 USP20Q9Y2K6 914 aa20.15■□□□□ 0.82
HOXA9-201ENST00000343483 LRRC37A2A6NM11 1700 aa20.15■□□□□ 0.82
HOXA9-201ENST00000343483 PDE2AO00408 941 aaPredicted RBP20.15■□□□□ 0.82
HOXA9-201ENST00000343483 CETPP11597 493 aa20.15■□□□□ 0.82
HOXA9-201ENST00000343483 ARL2P36404 184 aa20.15■□□□□ 0.82
HOXA9-201ENST00000343483 NAMPTP43490 491 aa20.15■□□□□ 0.82
HOXA9-201ENST00000343483 ARHGEF19Q8IW93 802 aa20.15■□□□□ 0.82
HOXA9-201ENST00000343483 GPD1LQ8N335 351 aa20.15■□□□□ 0.82
HOXA9-201ENST00000343483 DNAJC5GQ8N7S2 189 aa20.15■□□□□ 0.82
HOXA9-201ENST00000343483 SHCBP1Q8NEM2 672 aa20.15■□□□□ 0.82
HOXA9-201ENST00000343483 PARD3BQ8TEW8 1205 aa20.15■□□□□ 0.82
HOXA9-201ENST00000343483 FBXL18Q96ME1 805 aa20.15■□□□□ 0.82
HOXA9-201ENST00000343483 SPATA33Q96N06 139 aa20.15■□□□□ 0.82
HOXA9-201ENST00000343483 GPR20Q99678 358 aa20.15■□□□□ 0.82
HOXA9-201ENST00000343483 DAAM1Q9Y4D1 1078 aa20.15■□□□□ 0.82
HOXA9-201ENST00000343483 MYH9P35579 1960 aaKnown RBP20.14■□□□□ 0.82
HOXA9-201ENST00000343483 LRRIQ3A6PVS8 624 aaPredicted RBP20.14■□□□□ 0.81
HOXA9-201ENST00000343483 GARTP22102 1010 aa20.14■□□□□ 0.81
HOXA9-201ENST00000343483 OAS2P29728 719 aaKnown RBP20.14■□□□□ 0.81
HOXA9-201ENST00000343483 TARBP2Q15633 366 aaKnown RBP20.14■□□□□ 0.81
HOXA9-201ENST00000343483 ZNF771Q7L3S4 317 aaPredicted RBP20.14■□□□□ 0.81
HOXA9-201ENST00000343483 FMNL3Q8IVF7 1028 aa20.14■□□□□ 0.81
HOXA9-201ENST00000343483 DHX37Q8IY37 1157 aaKnown RBP20.14■□□□□ 0.81
HOXA9-201ENST00000343483 L1RE1Q9UN81 338 aa20.14■□□□□ 0.81
HOXA9-201ENST00000343483 CCL15-CCL14A0A0B4J2E2 113 aa20.14■□□□□ 0.81
HOXA9-201ENST00000343483 DDX3XO00571 662 aaKnown RBP eCLIP20.14■□□□□ 0.81
HOXA9-201ENST00000343483 POLR3GO15318 223 aaPredicted RBP20.14■□□□□ 0.81
HOXA9-201ENST00000343483 CCDC172P0C7W6 258 aa20.14■□□□□ 0.81
HOXA9-201ENST00000343483 DLATP10515 647 aaKnown RBP20.14■□□□□ 0.81
HOXA9-201ENST00000343483 CYP24A1Q07973 514 aa20.14■□□□□ 0.81
HOXA9-201ENST00000343483 CCL15Q16663 113 aa20.14■□□□□ 0.81
HOXA9-201ENST00000343483 USP37Q86T82 979 aa20.14■□□□□ 0.81
HOXA9-201ENST00000343483 GTF3C2Q8WUA4 911 aaPredicted RBP20.14■□□□□ 0.81
HOXA9-201ENST00000343483 COPS5Q92905 334 aa20.14■□□□□ 0.81
HOXA9-201ENST00000343483 FAM167AQ96KS9 214 aa20.14■□□□□ 0.81
HOXA9-201ENST00000343483 MFSD14AQ96MC6 490 aa20.14■□□□□ 0.81
HOXA9-201ENST00000343483 TOPORSQ9NS56 1045 aaPredicted RBP20.14■□□□□ 0.81
HOXA9-201ENST00000343483 BTBD19C9JJ37 291 aa20.13■□□□□ 0.81
HOXA9-201ENST00000343483 K7ERI5 159 aa20.13■□□□□ 0.81
HOXA9-201ENST00000343483 FOXN3O00409 490 aaPredicted RBP20.13■□□□□ 0.81
HOXA9-201ENST00000343483 NCK2O43639 380 aa20.13■□□□□ 0.81
HOXA9-201ENST00000343483 PALMO75781 387 aa20.13■□□□□ 0.81
HOXA9-201ENST00000343483 TXNP10599 105 aaKnown RBP20.13■□□□□ 0.81
HOXA9-201ENST00000343483 PRLRP16471 622 aa20.13■□□□□ 0.81
HOXA9-201ENST00000343483 GTF2A2P52657 109 aa20.13■□□□□ 0.81
HOXA9-201ENST00000343483 HUNKP57058 714 aa20.13■□□□□ 0.81
HOXA9-201ENST00000343483 CCNA1P78396 465 aa20.13■□□□□ 0.81
HOXA9-201ENST00000343483 KRT39Q6A163 491 aa20.13■□□□□ 0.81
HOXA9-201ENST00000343483 CREG2Q8IUH2 290 aa20.13■□□□□ 0.81
HOXA9-201ENST00000343483 GLYCTKQ8IVS8 523 aa20.13■□□□□ 0.81
HOXA9-201ENST00000343483 U2AF1L4Q8WU68 220 aaKnown RBP20.13■□□□□ 0.81
HOXA9-201ENST00000343483 MS4A4AQ96JQ5 239 aa20.13■□□□□ 0.81
HOXA9-201ENST00000343483 PSMB7Q99436 277 aa20.13■□□□□ 0.81
HOXA9-201ENST00000343483 SUGCTQ9HAC7 445 aa20.13■□□□□ 0.81
HOXA9-201ENST00000343483 PDGFCQ9NRA1 345 aa20.13■□□□□ 0.81
HOXA9-201ENST00000343483 HYOU1Q9Y4L1 999 aa20.13■□□□□ 0.81
HOXA9-201ENST00000343483 TLL2Q9Y6L7 1015 aa20.13■□□□□ 0.81
HOXA9-201ENST00000343483 MCM3P25205 808 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms