RNA–Protein interactions for RNA: ENST00000341455.10

CCDC66-202, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 3,042 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-202ENST00000341455 TBX4P57082 545 aa3.91□□□□□ -1.78
CCDC66-202ENST00000341455 SNAP25P60880 206 aa3.91□□□□□ -1.78
CCDC66-202ENST00000341455 PUM1Q14671 1186 aaKnown RBP eCLIP3.91□□□□□ -1.78
CCDC66-202ENST00000341455 SAFBQ15424 915 aaKnown RBP eCLIP3.91□□□□□ -1.78
CCDC66-202ENST00000341455 ENOX2Q16206 610 aaKnown RBP3.91□□□□□ -1.78
CCDC66-202ENST00000341455 IL17AQ16552 155 aa3.91□□□□□ -1.78
CCDC66-202ENST00000341455 USH1GQ495M9 461 aa3.91□□□□□ -1.78
CCDC66-202ENST00000341455 TRIM60Q495X7 471 aa3.91□□□□□ -1.78
CCDC66-202ENST00000341455 TTC38Q5R3I4 469 aa3.91□□□□□ -1.78
CCDC66-202ENST00000341455 PDXDC2PQ6P474 469 aa3.91□□□□□ -1.78
CCDC66-202ENST00000341455 RNF180Q86T96 592 aa3.91□□□□□ -1.78
CCDC66-202ENST00000341455 TLK2Q86UE8 772 aa3.91□□□□□ -1.78
CCDC66-202ENST00000341455 FMNL3Q8IVF7 1028 aa3.91□□□□□ -1.78
CCDC66-202ENST00000341455 UBALD2Q8IYN6 164 aa3.91□□□□□ -1.78
CCDC66-202ENST00000341455 CMTR1Q8N1G2 835 aaKnown RBP3.91□□□□□ -1.78
CCDC66-202ENST00000341455 NME8Q8N427 588 aa3.91□□□□□ -1.78
CCDC66-202ENST00000341455 FBXL6Q8N531 539 aa3.91□□□□□ -1.78
CCDC66-202ENST00000341455 DDX11Q96FC9 970 aa3.91□□□□□ -1.78
CCDC66-202ENST00000341455 STRA6Q9BX79 667 aa3.91□□□□□ -1.78
CCDC66-202ENST00000341455 SAP130Q9H0E3 1048 aa3.91□□□□□ -1.78
CCDC66-202ENST00000341455 JPH1Q9HDC5 661 aaPredicted RBP3.91□□□□□ -1.78
CCDC66-202ENST00000341455 DDX25Q9UHL0 483 aaKnown RBP3.91□□□□□ -1.78
CCDC66-202ENST00000341455 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.91□□□□□ -1.78
CCDC66-202ENST00000341455 RRN3P2A6NIE6 340 aa3.91□□□□□ -1.78
CCDC66-202ENST00000341455 PRR5-ARHGAP8B1AHC4 643 aa3.91□□□□□ -1.78
CCDC66-202ENST00000341455 BTBD18B2RXH4 712 aa3.91□□□□□ -1.78
CCDC66-202ENST00000341455 PEX10O60683 326 aa3.91□□□□□ -1.78
CCDC66-202ENST00000341455 CFBP00751 764 aa3.91□□□□□ -1.78
CCDC66-202ENST00000341455 RB1P06400 928 aa3.91□□□□□ -1.78
CCDC66-202ENST00000341455 SPATA31C1P0DKV0 1188 aa3.91□□□□□ -1.78
CCDC66-202ENST00000341455 ZNF131P52739 623 aa3.91□□□□□ -1.78
CCDC66-202ENST00000341455 EPHB4P54760 987 aa3.91□□□□□ -1.78
CCDC66-202ENST00000341455 ARHGAP8P85298 464 aa3.91□□□□□ -1.78
CCDC66-202ENST00000341455 ZXDAP98168 799 aa3.91□□□□□ -1.78
CCDC66-202ENST00000341455 CDC42EP1Q00587 391 aa3.91□□□□□ -1.78
CCDC66-202ENST00000341455 SIGLEC14Q08ET2 396 aa3.91□□□□□ -1.78
CCDC66-202ENST00000341455 DGKDQ16760 1214 aa3.91□□□□□ -1.78
CCDC66-202ENST00000341455 FAM187BQ17R55 369 aa3.91□□□□□ -1.78
CCDC66-202ENST00000341455 AXDND1Q5T1B0 1012 aaPredicted RBP3.91□□□□□ -1.78
CCDC66-202ENST00000341455 CDCA2Q69YH5 1023 aaPredicted RBP3.91□□□□□ -1.78
CCDC66-202ENST00000341455 SH3RF1Q7Z6J0 888 aa3.91□□□□□ -1.78
CCDC66-202ENST00000341455 SERINC5Q86VE9 423 aa3.91□□□□□ -1.78
CCDC66-202ENST00000341455 CKAP2LQ8IYA6 745 aa3.91□□□□□ -1.78
CCDC66-202ENST00000341455 GJD3Q8N144 294 aa3.91□□□□□ -1.78
CCDC66-202ENST00000341455 LINC00301Q8NCQ3 95 aa3.91□□□□□ -1.78
CCDC66-202ENST00000341455 SEPT1Q8WYJ6 367 aa3.91□□□□□ -1.78
CCDC66-202ENST00000341455 NELL1Q92832 810 aa3.91□□□□□ -1.78
CCDC66-202ENST00000341455 MMTAG2Q9BU76 263 aaKnown RBP3.91□□□□□ -1.78
CCDC66-202ENST00000341455 TEKT3Q9BXF9 490 aa3.91□□□□□ -1.78
CCDC66-202ENST00000341455 UBE2ZQ9H832 354 aaPredicted RBP3.91□□□□□ -1.78
CCDC66-202ENST00000341455 SLC9A2Q9UBY0 812 aa3.91□□□□□ -1.78
CCDC66-202ENST00000341455 NRCAMQ92823 1304 aa3.91□□□□□ -1.78
CCDC66-202ENST00000341455 SMIM35A0A1B0GVV1 85 aa3.9□□□□□ -1.78
CCDC66-202ENST00000341455 SOBPA7XYQ1 873 aa3.9□□□□□ -1.78
CCDC66-202ENST00000341455 IPO5O00410 1097 aaKnown RBP3.9□□□□□ -1.78
CCDC66-202ENST00000341455 CREB3O43889 395 aa3.9□□□□□ -1.78
CCDC66-202ENST00000341455 NEMFO60524 1076 aa3.9□□□□□ -1.78
CCDC66-202ENST00000341455 CUTAO60888 179 aa3.9□□□□□ -1.78
CCDC66-202ENST00000341455 ZIC2O95409 532 aaPredicted RBP3.9□□□□□ -1.78
CCDC66-202ENST00000341455 ARP10275 920 aa3.9□□□□□ -1.78
CCDC66-202ENST00000341455 ACTN1P12814 892 aa3.9□□□□□ -1.78
CCDC66-202ENST00000341455 ATP4AP20648 1035 aa3.9□□□□□ -1.78
CCDC66-202ENST00000341455 GUCY2CP25092 1073 aa3.9□□□□□ -1.78
CCDC66-202ENST00000341455 HOXA13P31271 388 aaPredicted RBP3.9□□□□□ -1.78
CCDC66-202ENST00000341455 ACLYP53396 1101 aa3.9□□□□□ -1.78
CCDC66-202ENST00000341455 LIMK1P53667 647 aa3.9□□□□□ -1.78
CCDC66-202ENST00000341455 IKQ13123 557 aaPredicted RBP3.9□□□□□ -1.78
CCDC66-202ENST00000341455 ACAP1Q15027 740 aa3.9□□□□□ -1.78
CCDC66-202ENST00000341455 NFIL3Q16649 462 aa3.9□□□□□ -1.78
CCDC66-202ENST00000341455 FSCN1Q16658 493 aaKnown RBP3.9□□□□□ -1.78
CCDC66-202ENST00000341455 MARCH8Q5T0T0 291 aa3.9□□□□□ -1.78
CCDC66-202ENST00000341455 FAM160B1Q5W0V3 765 aa3.9□□□□□ -1.78
CCDC66-202ENST00000341455 RESP18Q5W5W9 173 aa3.9□□□□□ -1.78
CCDC66-202ENST00000341455 LARP1BQ659C4 914 aaKnown RBP3.9□□□□□ -1.78
CCDC66-202ENST00000341455 ALG1LQ6GMV1 187 aa3.9□□□□□ -1.78
CCDC66-202ENST00000341455 PDE12Q6L8Q7 609 aaKnown RBP3.9□□□□□ -1.78
CCDC66-202ENST00000341455 MIS18BP1Q6P0N0 1132 aa3.9□□□□□ -1.78
CCDC66-202ENST00000341455 HOMER1Q86YM7 354 aa3.9□□□□□ -1.78
CCDC66-202ENST00000341455 FBXO16Q8IX29 292 aaPredicted RBP3.9□□□□□ -1.78
CCDC66-202ENST00000341455 CPXCR1Q8N123 301 aa3.9□□□□□ -1.78
CCDC66-202ENST00000341455 SPATA20Q8TB22 786 aa3.9□□□□□ -1.78
CCDC66-202ENST00000341455 CAGE1Q8TC20 777 aa3.9□□□□□ -1.78
CCDC66-202ENST00000341455 KCNG4Q8TDN1 519 aa3.9□□□□□ -1.78
CCDC66-202ENST00000341455 ATP8B4Q8TF62 1192 aa3.9□□□□□ -1.78
CCDC66-202ENST00000341455 TNPO1Q92973 898 aaKnown RBP3.9□□□□□ -1.78
CCDC66-202ENST00000341455 ASIC4Q96FT7 647 aa3.9□□□□□ -1.78
CCDC66-202ENST00000341455 TIGD1Q96MW7 591 aa3.9□□□□□ -1.78
CCDC66-202ENST00000341455 ZNF396Q96N95 335 aaPredicted RBP3.9□□□□□ -1.78
CCDC66-202ENST00000341455 CDCA3Q99618 268 aaPredicted RBP3.9□□□□□ -1.78
CCDC66-202ENST00000341455 SDF4Q9BRK5 362 aa3.9□□□□□ -1.78
CCDC66-202ENST00000341455 GTPBP4Q9BZE4 634 aaKnown RBP3.9□□□□□ -1.78
CCDC66-202ENST00000341455 UNC45AQ9H3U1 944 aa3.9□□□□□ -1.78
CCDC66-202ENST00000341455 SMARCAD1Q9H4L7 1026 aa3.9□□□□□ -1.78
CCDC66-202ENST00000341455 C17orf75Q9HAS0 396 aa3.9□□□□□ -1.78
CCDC66-202ENST00000341455 CACNA2D2Q9NY47 1150 aa3.9□□□□□ -1.78
CCDC66-202ENST00000341455 GTF2IRD1Q9UHL9 959 aa3.9□□□□□ -1.78
CCDC66-202ENST00000341455 KCNJ14Q9UNX9 436 aa3.9□□□□□ -1.78
CCDC66-202ENST00000341455 YBX2Q9Y2T7 364 aaKnown RBP3.9□□□□□ -1.78
CCDC66-202ENST00000341455 PCDHA2Q9Y5H9 948 aa3.9□□□□□ -1.78
CCDC66-202ENST00000341455 ATP6V1DQ9Y5K8 247 aa3.9□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms