RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 SLC39A4Q6P5W5 647 aa21.73■■□□□ 1.07
SPG7-202ENST00000341316 PPM1EQ8WY54 764 aa21.73■■□□□ 1.07
SPG7-202ENST00000341316 SENP7Q9BQF6 1050 aa21.73■■□□□ 1.07
SPG7-202ENST00000341316 ACP6Q9NPH0 428 aa21.73■■□□□ 1.07
SPG7-202ENST00000341316 PICK1Q9NRD5 415 aa21.73■■□□□ 1.07
SPG7-202ENST00000341316 AMFRQ9UKV5 643 aa21.73■■□□□ 1.07
SPG7-202ENST00000341316 DENND3A2RUS2 1198 aa21.73■■□□□ 1.07
SPG7-202ENST00000341316 CNGA1P29973 690 aa21.73■■□□□ 1.07
SPG7-202ENST00000341316 GUCY2FP51841 1108 aa21.73■■□□□ 1.07
SPG7-202ENST00000341316 CETN1Q12798 172 aa21.73■■□□□ 1.07
SPG7-202ENST00000341316 PAK2Q13177 524 aa21.73■■□□□ 1.07
SPG7-202ENST00000341316 NNTQ13423 1086 aa21.73■■□□□ 1.07
SPG7-202ENST00000341316 DCAF12L1Q5VU92 463 aa21.73■■□□□ 1.07
SPG7-202ENST00000341316 MAP4K3Q8IVH8 894 aa21.73■■□□□ 1.07
SPG7-202ENST00000341316 BCAS4Q8TDM0 211 aa21.73■■□□□ 1.07
SPG7-202ENST00000341316 CCDC127Q96BQ5 260 aa21.73■■□□□ 1.07
SPG7-202ENST00000341316 CEP170P1Q96L14 293 aa21.73■■□□□ 1.07
SPG7-202ENST00000341316 KREMEN1Q96MU8 473 aa21.73■■□□□ 1.07
SPG7-202ENST00000341316 DDX47Q9H0S4 455 aaKnown RBP21.73■■□□□ 1.07
SPG7-202ENST00000341316 ANKRD62A6NC57 917 aa21.72■■□□□ 1.07
SPG7-202ENST00000341316 DDX3YO15523 660 aaKnown RBP21.72■■□□□ 1.07
SPG7-202ENST00000341316 SP4Q02446 784 aa21.72■■□□□ 1.07
SPG7-202ENST00000341316 XRRA1Q6P2D8 792 aa21.72■■□□□ 1.07
SPG7-202ENST00000341316 FMNL3Q8IVF7 1028 aa21.72■■□□□ 1.07
SPG7-202ENST00000341316 ADGRA3Q8IWK6 1321 aa21.72■■□□□ 1.07
SPG7-202ENST00000341316 EFCAB13Q8IY85 973 aa21.72■■□□□ 1.07
SPG7-202ENST00000341316 ELMO3Q96BJ8 720 aa21.72■■□□□ 1.07
SPG7-202ENST00000341316 IWS1Q96ST2 819 aa21.72■■□□□ 1.07
SPG7-202ENST00000341316 ZNF541Q9H0D2 1346 aa21.72■■□□□ 1.07
SPG7-202ENST00000341316 AS3MTQ9HBK9 375 aa21.72■■□□□ 1.07
SPG7-202ENST00000341316 KRIT1O00522 736 aa21.72■■□□□ 1.07
SPG7-202ENST00000341316 SART1O43290 800 aaKnown RBP21.72■■□□□ 1.07
SPG7-202ENST00000341316 SGPL1O95470 568 aa21.72■■□□□ 1.07
SPG7-202ENST00000341316 MCCD1P59942 119 aaPredicted RBP21.72■■□□□ 1.07
SPG7-202ENST00000341316 SNRPFP62306 86 aaKnown RBP21.72■■□□□ 1.07
SPG7-202ENST00000341316 DMP1Q13316 513 aaPredicted RBP21.72■■□□□ 1.07
SPG7-202ENST00000341316 SWSAP1Q6NVH7 229 aa21.72■■□□□ 1.07
SPG7-202ENST00000341316 RPUSD2Q8IZ73 545 aaKnown RBP21.72■■□□□ 1.07
SPG7-202ENST00000341316 RDM1Q8NG50 284 aa21.72■■□□□ 1.07
SPG7-202ENST00000341316 CALR3Q96L12 384 aaKnown RBP21.72■■□□□ 1.07
SPG7-202ENST00000341316 PCDHB18PQ96TA0 734 aa21.72■■□□□ 1.07
SPG7-202ENST00000341316 KMT5AQ9NQR1 393 aa21.72■■□□□ 1.07
SPG7-202ENST00000341316 TOPORSQ9NS56 1045 aaPredicted RBP21.72■■□□□ 1.07
SPG7-202ENST00000341316 ECHS1P30084 290 aa21.71■■□□□ 1.07
SPG7-202ENST00000341316 USP8P40818 1118 aa21.71■■□□□ 1.07
SPG7-202ENST00000341316 SMTNP53814 917 aa21.71■■□□□ 1.07
SPG7-202ENST00000341316 SH2D3CQ8N5H7 860 aa21.71■■□□□ 1.07
SPG7-202ENST00000341316 NSUN6Q8TEA1 469 aaKnown RBP21.71■■□□□ 1.07
SPG7-202ENST00000341316 C12orf42Q96LP6 360 aa21.71■■□□□ 1.07
SPG7-202ENST00000341316 NR2E1Q9Y466 385 aa21.71■■□□□ 1.07
SPG7-202ENST00000341316 PMM2O15305 246 aa21.71■■□□□ 1.07
SPG7-202ENST00000341316 FTLP02792 175 aaPredicted RBP21.71■■□□□ 1.07
SPG7-202ENST00000341316 CHRNB2P17787 502 aa21.71■■□□□ 1.07
SPG7-202ENST00000341316 SKOR1P84550 965 aa21.71■■□□□ 1.07
SPG7-202ENST00000341316 NOP9Q86U38 636 aaKnown RBP21.71■■□□□ 1.07
SPG7-202ENST00000341316 CCDC60Q8IWA6 550 aaPredicted RBP21.71■■□□□ 1.07
SPG7-202ENST00000341316 TRPM4Q8TD43 1214 aa21.71■■□□□ 1.07
SPG7-202ENST00000341316 PARD3BQ8TEW8 1205 aa21.71■■□□□ 1.07
SPG7-202ENST00000341316 PIK3R5Q8WYR1 880 aa21.71■■□□□ 1.07
SPG7-202ENST00000341316 NTPCRQ9BSD7 190 aaKnown RBP21.71■■□□□ 1.07
SPG7-202ENST00000341316 A1CFQ9NQ94 594 aaKnown RBP21.71■■□□□ 1.07
SPG7-202ENST00000341316 CYP39A1Q9NYL5 469 aa21.71■■□□□ 1.07
SPG7-202ENST00000341316 CHORDC1Q9UHD1 332 aaPredicted RBP21.71■■□□□ 1.07
SPG7-202ENST00000341316 BHMG1C9JSJ3 638 aaPredicted RBP21.7■■□□□ 1.06
SPG7-202ENST00000341316 EBAG9O00559 213 aa21.7■■□□□ 1.06
SPG7-202ENST00000341316 KRT14P02533 472 aa21.7■■□□□ 1.06
SPG7-202ENST00000341316 KCTD16Q68DU8 428 aa21.7■■□□□ 1.06
SPG7-202ENST00000341316 DDX42Q86XP3 938 aaKnown RBP eCLIP21.7■■□□□ 1.06
SPG7-202ENST00000341316 ISCUQ9H1K1 167 aa21.7■■□□□ 1.06
SPG7-202ENST00000341316 XPNPEP1Q9NQW7 623 aa21.7■■□□□ 1.06
SPG7-202ENST00000341316 PDLIM7Q9NR12 457 aa21.7■■□□□ 1.06
SPG7-202ENST00000341316 EXOC7Q9UPT5 735 aa21.7■■□□□ 1.06
SPG7-202ENST00000341316 USP20Q9Y2K6 914 aa21.7■■□□□ 1.06
SPG7-202ENST00000341316 PHIPQ8WWQ0 1821 aa21.7■■□□□ 1.06
SPG7-202ENST00000341316 OAZ1P54368 228 aa21.69■■□□□ 1.06
SPG7-202ENST00000341316 CFAP58Q5T655 872 aa21.69■■□□□ 1.06
SPG7-202ENST00000341316 FAM71AQ8IYT1 594 aa21.69■■□□□ 1.06
SPG7-202ENST00000341316 IQCKQ8N0W5 287 aa21.69■■□□□ 1.06
SPG7-202ENST00000341316 PPM1KQ8N3J5 372 aa21.69■■□□□ 1.06
SPG7-202ENST00000341316 SLC17A8Q8NDX2 589 aa21.69■■□□□ 1.06
SPG7-202ENST00000341316 EPS8L1Q8TE68 723 aa21.69■■□□□ 1.06
SPG7-202ENST00000341316 FAM84AQ96KN4 292 aa21.69■■□□□ 1.06
SPG7-202ENST00000341316 EFCC1Q9HA90 598 aa21.69■■□□□ 1.06
SPG7-202ENST00000341316 NOCTQ9UK39 431 aaKnown RBP21.69■■□□□ 1.06
SPG7-202ENST00000341316 MAFGO15525 162 aa21.69■■□□□ 1.06
SPG7-202ENST00000341316 CYP26A1O43174 497 aa21.69■■□□□ 1.06
SPG7-202ENST00000341316 PDCLQ13371 301 aa21.69■■□□□ 1.06
SPG7-202ENST00000341316 OTUD6AQ7L8S5 288 aa21.69■■□□□ 1.06
SPG7-202ENST00000341316 TADA2BQ86TJ2 420 aa21.69■■□□□ 1.06
SPG7-202ENST00000341316 SLC47A2Q86VL8 602 aa21.69■■□□□ 1.06
SPG7-202ENST00000341316 SPIRE2Q8WWL2 714 aa21.69■■□□□ 1.06
SPG7-202ENST00000341316 TAF1DQ9H5J8 278 aaPredicted RBP21.69■■□□□ 1.06
SPG7-202ENST00000341316 JPH1Q9HDC5 661 aaPredicted RBP21.69■■□□□ 1.06
SPG7-202ENST00000341316 AMACRQ9UHK6 382 aa21.69■■□□□ 1.06
SPG7-202ENST00000341316 A0A087WUV0 522 aaPredicted RBP21.68■■□□□ 1.06
SPG7-202ENST00000341316 CATSPERGQ6ZRH7 1159 aa21.68■■□□□ 1.06
SPG7-202ENST00000341316 ALG3Q92685 438 aa21.68■■□□□ 1.06
SPG7-202ENST00000341316 KIFAP3Q92845 792 aa21.68■■□□□ 1.06
SPG7-202ENST00000341316 ATP6V0A1Q93050 837 aa21.68■■□□□ 1.06
SPG7-202ENST00000341316 FAM107BQ9H098 131 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms