RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 STK39Q9UEW8 545 aa18.39■□□□□ 0.53
NECTIN1-202ENST00000340882 KANSL1LA0AUZ9 987 aa18.38■□□□□ 0.53
NECTIN1-202ENST00000340882 ESYT2A0FGR8 921 aa18.38■□□□□ 0.53
NECTIN1-202ENST00000340882 GOLGA8AA7E2F4 631 aa18.38■□□□□ 0.53
NECTIN1-202ENST00000340882 GOLGA8BA8MQT2 603 aa18.38■□□□□ 0.53
NECTIN1-202ENST00000340882 GAS2O43903 313 aaKnown RBP18.38■□□□□ 0.53
NECTIN1-202ENST00000340882 MAFO75444 373 aaPredicted RBP18.38■□□□□ 0.53
NECTIN1-202ENST00000340882 CD72P21854 359 aa18.38■□□□□ 0.53
NECTIN1-202ENST00000340882 ADD1P35611 737 aaKnown RBP18.38■□□□□ 0.53
NECTIN1-202ENST00000340882 NTHL1P78549 312 aa18.38■□□□□ 0.53
NECTIN1-202ENST00000340882 CDC42EP1Q00587 391 aa18.38■□□□□ 0.53
NECTIN1-202ENST00000340882 LILRA6Q6PI73 481 aa18.38■□□□□ 0.53
NECTIN1-202ENST00000340882 REXO1Q8N1G1 1221 aaKnown RBP18.38■□□□□ 0.53
NECTIN1-202ENST00000340882 SMG8Q8ND04 991 aaKnown RBP18.38■□□□□ 0.53
NECTIN1-202ENST00000340882 PRKD2Q9BZL6 878 aa18.38■□□□□ 0.53
NECTIN1-202ENST00000340882 RNF39Q9H2S5 420 aa18.38■□□□□ 0.53
NECTIN1-202ENST00000340882 PARD6AQ9NPB6 346 aa18.38■□□□□ 0.53
NECTIN1-202ENST00000340882 FBXO4Q9UKT5 387 aa18.38■□□□□ 0.53
NECTIN1-202ENST00000340882 SPTLC1O15269 473 aa18.37■□□□□ 0.53
NECTIN1-202ENST00000340882 LAMTOR5O43504 91 aa18.37■□□□□ 0.53
NECTIN1-202ENST00000340882 GAS7O60861 476 aa18.37■□□□□ 0.53
NECTIN1-202ENST00000340882 RPL17P18621 184 aaKnown RBP18.37■□□□□ 0.53
NECTIN1-202ENST00000340882 DNM2P50570 870 aa18.37■□□□□ 0.53
NECTIN1-202ENST00000340882 JAK3P52333 1124 aa18.37■□□□□ 0.53
NECTIN1-202ENST00000340882 ST3GAL2Q16842 350 aa18.37■□□□□ 0.53
NECTIN1-202ENST00000340882 XKR3Q5GH77 459 aa18.37■□□□□ 0.53
NECTIN1-202ENST00000340882 LRCH2Q5VUJ6 765 aa18.37■□□□□ 0.53
NECTIN1-202ENST00000340882 PLA2G4FQ68DD2 849 aa18.37■□□□□ 0.53
NECTIN1-202ENST00000340882 TSSK4Q6SA08 328 aa18.37■□□□□ 0.53
NECTIN1-202ENST00000340882 ZBTB44Q8NCP5 570 aa18.37■□□□□ 0.53
NECTIN1-202ENST00000340882 HDAC7Q8WUI4 952 aa18.37■□□□□ 0.53
NECTIN1-202ENST00000340882 CCDC136Q96JN2 1154 aa18.37■□□□□ 0.53
NECTIN1-202ENST00000340882 RIT2Q99578 217 aa18.37■□□□□ 0.53
NECTIN1-202ENST00000340882 CHST7Q9NS84 486 aa18.37■□□□□ 0.53
NECTIN1-202ENST00000340882 KANSL3Q9P2N6 904 aa18.37■□□□□ 0.53
NECTIN1-202ENST00000340882 SMG5Q9UPR3 1016 aaKnown RBP18.37■□□□□ 0.53
NECTIN1-202ENST00000340882 SSX2IPQ9Y2D8 614 aa18.37■□□□□ 0.53
NECTIN1-202ENST00000340882 PSMD10O75832 226 aa18.36■□□□□ 0.53
NECTIN1-202ENST00000340882 SFNP31947 248 aa18.36■□□□□ 0.53
NECTIN1-202ENST00000340882 DSC1Q08554 894 aa18.36■□□□□ 0.53
NECTIN1-202ENST00000340882 UBXN2BQ14CS0 331 aa18.36■□□□□ 0.53
NECTIN1-202ENST00000340882 MLF2Q15773 248 aaPredicted RBP18.36■□□□□ 0.53
NECTIN1-202ENST00000340882 B3GNT9Q6UX72 402 aa18.36■□□□□ 0.53
NECTIN1-202ENST00000340882 ANO5Q75V66 913 aa18.36■□□□□ 0.53
NECTIN1-202ENST00000340882 ZNF579Q8NAF0 562 aaKnown RBP18.36■□□□□ 0.53
NECTIN1-202ENST00000340882 NELL1Q92832 810 aa18.36■□□□□ 0.53
NECTIN1-202ENST00000340882 SHDQ96IW2 340 aa18.36■□□□□ 0.53
NECTIN1-202ENST00000340882 TEKT3Q9BXF9 490 aa18.36■□□□□ 0.53
NECTIN1-202ENST00000340882 BCO2Q9BYV7 579 aa18.36■□□□□ 0.53
NECTIN1-202ENST00000340882 GPR62Q9BZJ7 368 aa18.36■□□□□ 0.53
NECTIN1-202ENST00000340882 PLEKHA4Q9H4M7 779 aa18.36■□□□□ 0.53
NECTIN1-202ENST00000340882 C6orf50Q9HD87 102 aa18.36■□□□□ 0.53
NECTIN1-202ENST00000340882 ZDHHC7Q9NXF8 308 aa18.36■□□□□ 0.53
NECTIN1-202ENST00000340882 CNTNAP2Q9UHC6 1331 aa18.36■□□□□ 0.53
NECTIN1-202ENST00000340882 DPP7Q9UHL4 492 aa18.36■□□□□ 0.53
NECTIN1-202ENST00000340882 PCDHGA2Q9Y5H1 932 aa18.36■□□□□ 0.53
NECTIN1-202ENST00000340882 KLF18A0A0U1RQI7 1052 aa18.35■□□□□ 0.53
NECTIN1-202ENST00000340882 FAM170BA6NMN3 283 aa18.35■□□□□ 0.53
NECTIN1-202ENST00000340882 DDX11L8A8MPP1 907 aa18.35■□□□□ 0.53
NECTIN1-202ENST00000340882 LILRB5O75023 590 aa18.35■□□□□ 0.53
NECTIN1-202ENST00000340882 NCLP19338 710 aaKnown RBP18.35■□□□□ 0.53
NECTIN1-202ENST00000340882 FSHRP23945 695 aa18.35■□□□□ 0.53
NECTIN1-202ENST00000340882 SLC44A4Q53GD3 710 aa18.35■□□□□ 0.53
NECTIN1-202ENST00000340882 ELMSAN1Q6PJG2 1045 aa18.35■□□□□ 0.53
NECTIN1-202ENST00000340882 MIER3Q7Z3K6 550 aa18.35■□□□□ 0.53
NECTIN1-202ENST00000340882 GRASPQ7Z6J2 395 aaPredicted RBP18.35■□□□□ 0.53
NECTIN1-202ENST00000340882 ATRIPQ8WXE1 791 aa18.35■□□□□ 0.53
NECTIN1-202ENST00000340882 RABGGTAQ92696 567 aa18.35■□□□□ 0.53
NECTIN1-202ENST00000340882 PHKBQ93100 1093 aa18.35■□□□□ 0.53
NECTIN1-202ENST00000340882 ZFP42Q96MM3 310 aa18.35■□□□□ 0.53
NECTIN1-202ENST00000340882 GAD1Q99259 594 aa18.35■□□□□ 0.53
NECTIN1-202ENST00000340882 EIF2AQ9BY44 585 aaKnown RBP18.35■□□□□ 0.53
NECTIN1-202ENST00000340882 EPC1Q9H2F5 836 aa18.35■□□□□ 0.53
NECTIN1-202ENST00000340882 CDV3Q9UKY7 258 aaKnown RBP18.35■□□□□ 0.53
NECTIN1-202ENST00000340882 HES2Q9Y543 173 aa18.35■□□□□ 0.53
NECTIN1-202ENST00000340882 RALGAPA1Q6GYQ0 2036 aa18.34■□□□□ 0.53
NECTIN1-202ENST00000340882 ARL5CA6NH57 179 aa18.34■□□□□ 0.53
NECTIN1-202ENST00000340882 ZMYND10O75800 440 aa18.34■□□□□ 0.53
NECTIN1-202ENST00000340882 ADRB1P08588 477 aa18.34■□□□□ 0.53
NECTIN1-202ENST00000340882 SDHBP21912 280 aa18.34■□□□□ 0.53
NECTIN1-202ENST00000340882 MLH1P40692 756 aa18.34■□□□□ 0.53
NECTIN1-202ENST00000340882 SCNN1GP51170 649 aa18.34■□□□□ 0.53
NECTIN1-202ENST00000340882 NPEPPSP55786 919 aa18.34■□□□□ 0.53
NECTIN1-202ENST00000340882 ADCK5Q3MIX3 580 aa18.34■□□□□ 0.53
NECTIN1-202ENST00000340882 LTB4R2Q9NPC1 389 aa18.34■□□□□ 0.53
NECTIN1-202ENST00000340882 ZSCAN32Q9NX65 697 aa18.34■□□□□ 0.53
NECTIN1-202ENST00000340882 USP18Q9UMW8 372 aa18.34■□□□□ 0.53
NECTIN1-202ENST00000340882 IPPQ9Y573 584 aa18.34■□□□□ 0.53
NECTIN1-202ENST00000340882 COL4A3BPQ9Y5P4 624 aa18.34■□□□□ 0.53
NECTIN1-202ENST00000340882 ARID2Q68CP9 1835 aa18.34■□□□□ 0.53
NECTIN1-202ENST00000340882 VWA8A3KMH1 1905 aa18.33■□□□□ 0.53
NECTIN1-202ENST00000340882 PRR5-ARHGAP8B1AHC4 643 aa18.33■□□□□ 0.52
NECTIN1-202ENST00000340882 SRGAP2CP0DJJ0 459 aa18.33■□□□□ 0.52
NECTIN1-202ENST00000340882 ITGA4P13612 1032 aa18.33■□□□□ 0.52
NECTIN1-202ENST00000340882 ARHGAP8P85298 464 aa18.33■□□□□ 0.52
NECTIN1-202ENST00000340882 LMNB2Q03252 620 aa18.33■□□□□ 0.52
NECTIN1-202ENST00000340882 PRSS55Q6UWB4 352 aaPredicted RBP18.33■□□□□ 0.52
NECTIN1-202ENST00000340882 GPR161Q8N6U8 529 aaKnown RBP18.33■□□□□ 0.52
NECTIN1-202ENST00000340882 PRPF31Q8WWY3 499 aaKnown RBP18.33■□□□□ 0.52
NECTIN1-202ENST00000340882 TMEM143Q96AN5 459 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms