RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 KARSQ15046 597 aaKnown RBP17.01■□□□□ 0.31
VAPA-201ENST00000340541 FAM187BQ17R55 369 aa17.01■□□□□ 0.31
VAPA-201ENST00000340541 LONRF3Q496Y0 759 aa17.01■□□□□ 0.31
VAPA-201ENST00000340541 SPECC1Q5M775 1068 aa17.01■□□□□ 0.31
VAPA-201ENST00000340541 FOXD4L5Q5VV16 416 aaPredicted RBP17.01■□□□□ 0.31
VAPA-201ENST00000340541 NOTUMQ6P988 496 aa17.01■□□□□ 0.31
VAPA-201ENST00000340541 SMG8Q8ND04 991 aaKnown RBP17.01■□□□□ 0.31
VAPA-201ENST00000340541 HELQQ8TDG4 1101 aa17.01■□□□□ 0.31
VAPA-201ENST00000340541 FOXD4L4Q8WXT5 416 aaPredicted RBP17.01■□□□□ 0.31
VAPA-201ENST00000340541 EPSTI1Q96J88 318 aa17.01■□□□□ 0.31
VAPA-201ENST00000340541 CDK5RAP3Q96JB5 506 aa17.01■□□□□ 0.31
VAPA-201ENST00000340541 MSLNLQ96KJ4 702 aa17.01■□□□□ 0.31
VAPA-201ENST00000340541 KIFC3Q9BVG8 833 aa17.01■□□□□ 0.31
VAPA-201ENST00000340541 EIF2AQ9BY44 585 aaKnown RBP17.01■□□□□ 0.31
VAPA-201ENST00000340541 IGFLR1Q9H665 355 aa17.01■□□□□ 0.31
VAPA-201ENST00000340541 CNTNAP2Q9UHC6 1331 aa17■□□□□ 0.31
VAPA-201ENST00000340541 A0A1B0GUA9 196 aa17■□□□□ 0.31
VAPA-201ENST00000340541 TBX10O75333 385 aa17■□□□□ 0.31
VAPA-201ENST00000340541 PLCG1P19174 1290 aa17■□□□□ 0.31
VAPA-201ENST00000340541 IRS1P35568 1242 aa17■□□□□ 0.31
VAPA-201ENST00000340541 COASYQ13057 564 aa17■□□□□ 0.31
VAPA-201ENST00000340541 PPP2R5AQ15172 486 aa17■□□□□ 0.31
VAPA-201ENST00000340541 ARSHQ5FYA8 562 aa17■□□□□ 0.31
VAPA-201ENST00000340541 AGMOQ6ZNB7 445 aa17■□□□□ 0.31
VAPA-201ENST00000340541 ZBTB8OSQ8IWT0 167 aa17■□□□□ 0.31
VAPA-201ENST00000340541 LRRC43Q8N309 656 aa17■□□□□ 0.31
VAPA-201ENST00000340541 LINC00301Q8NCQ3 95 aa17■□□□□ 0.31
VAPA-201ENST00000340541 CCDC51Q96ER9 411 aa17■□□□□ 0.31
VAPA-201ENST00000340541 CALML4Q96GE6 196 aa17■□□□□ 0.31
VAPA-201ENST00000340541 PRIMPOLQ96LW4 560 aa17■□□□□ 0.31
VAPA-201ENST00000340541 CDCA3Q99618 268 aaPredicted RBP17■□□□□ 0.31
VAPA-201ENST00000340541 C2orf40Q9H1Z8 148 aa17■□□□□ 0.31
VAPA-201ENST00000340541 PRMT7Q9NVM4 692 aaPredicted RBP17■□□□□ 0.31
VAPA-201ENST00000340541 TFIP11Q9UBB9 837 aaKnown RBP17■□□□□ 0.31
VAPA-201ENST00000340541 MYH11P35749 1972 aa16.99■□□□□ 0.31
VAPA-201ENST00000340541 OFD1O75665 1012 aa16.99■□□□□ 0.31
VAPA-201ENST00000340541 SSBP05455 408 aaKnown RBP eCLIP16.99■□□□□ 0.31
VAPA-201ENST00000340541 NCLP19338 710 aaKnown RBP16.99■□□□□ 0.31
VAPA-201ENST00000340541 GTF2F1P35269 517 aaKnown RBP eCLIP16.99■□□□□ 0.31
VAPA-201ENST00000340541 NDUFV1P49821 464 aa16.99■□□□□ 0.31
VAPA-201ENST00000340541 HERC4Q5GLZ8 1057 aaPredicted RBP16.99■□□□□ 0.31
VAPA-201ENST00000340541 CDR2LQ86X02 465 aaPredicted RBP16.99■□□□□ 0.31
VAPA-201ENST00000340541 ABI1Q8IZP0 508 aa16.99■□□□□ 0.31
VAPA-201ENST00000340541 COLGALT1Q8NBJ5 622 aa16.99■□□□□ 0.31
VAPA-201ENST00000340541 DEPTORQ8TB45 409 aa16.99■□□□□ 0.31
VAPA-201ENST00000340541 IFT74Q96LB3 600 aa16.99■□□□□ 0.31
VAPA-201ENST00000340541 TIPINQ9BVW5 301 aa16.99■□□□□ 0.31
VAPA-201ENST00000340541 KCND2Q9NZV8 630 aa16.99■□□□□ 0.31
VAPA-201ENST00000340541 LZTS1Q9Y250 596 aa16.99■□□□□ 0.31
VAPA-201ENST00000340541 ACKR2O00590 384 aa16.98■□□□□ 0.31
VAPA-201ENST00000340541 LINC01565O15544 149 aa16.98■□□□□ 0.31
VAPA-201ENST00000340541 NPTX2P47972 431 aa16.98■□□□□ 0.31
VAPA-201ENST00000340541 AFF1P51825 1210 aaKnown RBP16.98■□□□□ 0.31
VAPA-201ENST00000340541 PEX3P56589 373 aa16.98■□□□□ 0.31
VAPA-201ENST00000340541 NCBP1Q09161 790 aaKnown RBP16.98■□□□□ 0.31
VAPA-201ENST00000340541 RAD51AP2Q09MP3 1159 aa16.98■□□□□ 0.31
VAPA-201ENST00000340541 KRI1Q8N9T8 703 aaKnown RBP16.98■□□□□ 0.31
VAPA-201ENST00000340541 SMRP1Q8NCR6 262 aa16.98■□□□□ 0.31
VAPA-201ENST00000340541 RSPH1Q8WYR4 309 aa16.98■□□□□ 0.31
VAPA-201ENST00000340541 RAD54LQ92698 747 aa16.98■□□□□ 0.31
VAPA-201ENST00000340541 PGBD4Q96DM1 585 aa16.98■□□□□ 0.31
VAPA-201ENST00000340541 DRC1Q96MC2 740 aa16.98■□□□□ 0.31
VAPA-201ENST00000340541 ZNF396Q96N95 335 aaPredicted RBP16.98■□□□□ 0.31
VAPA-201ENST00000340541 RNF39Q9H2S5 420 aa16.98■□□□□ 0.31
VAPA-201ENST00000340541 CLEC1BQ9P126 229 aa16.98■□□□□ 0.31
VAPA-201ENST00000340541 ARHGAP28Q9P2N2 729 aa16.98■□□□□ 0.31
VAPA-201ENST00000340541 USP20Q9Y2K6 914 aa16.98■□□□□ 0.31
VAPA-201ENST00000340541 ZDHHC9Q9Y397 364 aa16.98■□□□□ 0.31
VAPA-201ENST00000340541 IPPQ9Y573 584 aa16.98■□□□□ 0.31
VAPA-201ENST00000340541 NPHP3-ACAD11A0A0J9YXS1 232 aa16.97■□□□□ 0.31
VAPA-201ENST00000340541 SFI1A8K8P3 1242 aa16.97■□□□□ 0.31
VAPA-201ENST00000340541 B4GALT3O60512 393 aa16.97■□□□□ 0.31
VAPA-201ENST00000340541 PRKCBP05771 671 aa16.97■□□□□ 0.31
VAPA-201ENST00000340541 LAG3P18627 525 aa16.97■□□□□ 0.31
VAPA-201ENST00000340541 NRIP1P48552 1158 aa16.97■□□□□ 0.31
VAPA-201ENST00000340541 EFNA5P52803 228 aa16.97■□□□□ 0.31
VAPA-201ENST00000340541 MCM6Q14566 821 aa16.97■□□□□ 0.31
VAPA-201ENST00000340541 CLUL1Q15846 466 aa16.97■□□□□ 0.31
VAPA-201ENST00000340541 MAPK6Q16659 721 aa16.97■□□□□ 0.31
VAPA-201ENST00000340541 SPOUT1Q5T280 376 aaKnown RBP16.97■□□□□ 0.31
VAPA-201ENST00000340541 SLC27A1Q6PCB7 646 aa16.97■□□□□ 0.31
VAPA-201ENST00000340541 GLB1LQ6UWU2 654 aa16.97■□□□□ 0.31
VAPA-201ENST00000340541 TAS1R3Q7RTX0 852 aa16.97■□□□□ 0.31
VAPA-201ENST00000340541 CNNM3Q8NE01 707 aa16.97■□□□□ 0.31
VAPA-201ENST00000340541 MICAL1Q8TDZ2 1067 aa16.97■□□□□ 0.31
VAPA-201ENST00000340541 NTPCRQ9BSD7 190 aaKnown RBP16.97■□□□□ 0.31
VAPA-201ENST00000340541 MRPL9Q9BYD2 267 aaKnown RBP16.97■□□□□ 0.31
VAPA-201ENST00000340541 PDZD7Q9H5P4 517 aa16.97■□□□□ 0.31
VAPA-201ENST00000340541 TLE6Q9H808 572 aa16.97■□□□□ 0.31
VAPA-201ENST00000340541 RSAD1Q9HA92 442 aa16.97■□□□□ 0.31
VAPA-201ENST00000340541 C17orf75Q9HAS0 396 aa16.97■□□□□ 0.31
VAPA-201ENST00000340541 TLR9Q9NR96 1032 aa16.97■□□□□ 0.31
VAPA-201ENST00000340541 TBC1D13Q9NVG8 400 aa16.97■□□□□ 0.31
VAPA-201ENST00000340541 PUF60Q9UHX1 559 aaKnown RBP16.97■□□□□ 0.31
VAPA-201ENST00000340541 HES2Q9Y543 173 aa16.97■□□□□ 0.31
VAPA-201ENST00000340541 CCDC169A6NNP5 214 aa16.96■□□□□ 0.31
VAPA-201ENST00000340541 SPTLC2O15270 562 aa16.96■□□□□ 0.31
VAPA-201ENST00000340541 INPPL1O15357 1258 aa16.96■□□□□ 0.31
VAPA-201ENST00000340541 FGF18O76093 207 aa16.96■□□□□ 0.31
VAPA-201ENST00000340541 YEATS4O95619 227 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms