RNA–Protein interactions for RNA: ENST00000339861.8

SEMA4D-201, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-201ENST00000339861 A0A1B0GUA9 196 aa11.86□□□□□ -0.51
SEMA4D-201ENST00000339861 RASA4BC9J798 803 aa11.86□□□□□ -0.51
SEMA4D-201ENST00000339861 CHUKO15111 745 aa11.86□□□□□ -0.51
SEMA4D-201ENST00000339861 RASA4O43374 803 aa11.86□□□□□ -0.51
SEMA4D-201ENST00000339861 KRT1P04264 644 aa11.86□□□□□ -0.51
SEMA4D-201ENST00000339861 P4HBP07237 508 aaKnown RBP11.86□□□□□ -0.51
SEMA4D-201ENST00000339861 CHRNA3P32297 505 aa11.86□□□□□ -0.51
SEMA4D-201ENST00000339861 DDR1Q08345 913 aa11.86□□□□□ -0.51
SEMA4D-201ENST00000339861 MYO1EQ12965 1108 aa11.86□□□□□ -0.51
SEMA4D-201ENST00000339861 SCYL2Q6P3W7 929 aa11.86□□□□□ -0.51
SEMA4D-201ENST00000339861 KRT27Q7Z3Y8 459 aa11.86□□□□□ -0.51
SEMA4D-201ENST00000339861 NT5DC3Q86UY8 548 aa11.86□□□□□ -0.51
SEMA4D-201ENST00000339861 SLC47A2Q86VL8 602 aa11.86□□□□□ -0.51
SEMA4D-201ENST00000339861 CRAMP1Q96RY5 1269 aa11.86□□□□□ -0.51
SEMA4D-201ENST00000339861 MAK16Q9BXY0 300 aaKnown RBP11.86□□□□□ -0.51
SEMA4D-201ENST00000339861 GABBR1Q9UBS5 961 aa11.86□□□□□ -0.51
SEMA4D-201ENST00000339861 TUBGCP6Q96RT7 1819 aa11.86□□□□□ -0.51
SEMA4D-201ENST00000339861 AFF2P51816 1311 aa11.86□□□□□ -0.51
SEMA4D-201ENST00000339861 SCP2P22307 547 aa11.86□□□□□ -0.51
SEMA4D-201ENST00000339861 CA4P22748 312 aa11.86□□□□□ -0.51
SEMA4D-201ENST00000339861 MARK3P27448 753 aa11.86□□□□□ -0.51
SEMA4D-201ENST00000339861 YWHABP31946 246 aaKnown RBP11.86□□□□□ -0.51
SEMA4D-201ENST00000339861 PRAMEF18Q5VWM3 479 aa11.86□□□□□ -0.51
SEMA4D-201ENST00000339861 DAB2IPQ5VWQ8 1189 aa11.86□□□□□ -0.51
SEMA4D-201ENST00000339861 SWSAP1Q6NVH7 229 aa11.86□□□□□ -0.51
SEMA4D-201ENST00000339861 TMEM117Q9H0C3 514 aa11.86□□□□□ -0.51
SEMA4D-201ENST00000339861 ZWILCHQ9H900 591 aa11.86□□□□□ -0.51
SEMA4D-201ENST00000339861 PICK1Q9NRD5 415 aa11.86□□□□□ -0.51
SEMA4D-201ENST00000339861 SLC16A3O15427 465 aaKnown RBP11.86□□□□□ -0.51
SEMA4D-201ENST00000339861 SLITRK3O94933 977 aa11.86□□□□□ -0.51
SEMA4D-201ENST00000339861 TFAMQ00059 246 aaKnown RBP11.86□□□□□ -0.51
SEMA4D-201ENST00000339861 RASA3Q14644 834 aa11.86□□□□□ -0.51
SEMA4D-201ENST00000339861 PALB2Q86YC2 1186 aa11.86□□□□□ -0.51
SEMA4D-201ENST00000339861 ARHGEF19Q8IW93 802 aa11.86□□□□□ -0.51
SEMA4D-201ENST00000339861 PARP9Q8IXQ6 854 aa11.86□□□□□ -0.51
SEMA4D-201ENST00000339861 PALM2Q8IXS6 379 aa11.86□□□□□ -0.51
SEMA4D-201ENST00000339861 NIM1KQ8IY84 436 aa11.86□□□□□ -0.51
SEMA4D-201ENST00000339861 PURBQ96QR8 312 aaKnown RBP11.86□□□□□ -0.51
SEMA4D-201ENST00000339861 KCNH7Q9NS40 1196 aa11.86□□□□□ -0.51
SEMA4D-201ENST00000339861 VPS72Q15906 364 aa11.86□□□□□ -0.51
SEMA4D-201ENST00000339861 HHIPL2Q6UWX4 724 aa11.86□□□□□ -0.51
SEMA4D-201ENST00000339861 ZNF720Q7Z2F6 126 aa11.86□□□□□ -0.51
SEMA4D-201ENST00000339861 CROCCP2Q86T23 111 aa11.86□□□□□ -0.51
SEMA4D-201ENST00000339861 LNX1Q8TBB1 728 aaPredicted RBP11.86□□□□□ -0.51
SEMA4D-201ENST00000339861 ACTRT1Q8TDG2 376 aa11.86□□□□□ -0.51
SEMA4D-201ENST00000339861 RSAD2Q8WXG1 361 aa11.86□□□□□ -0.51
SEMA4D-201ENST00000339861 ACTR5Q9H9F9 607 aaPredicted RBP11.86□□□□□ -0.51
SEMA4D-201ENST00000339861 DDX20Q9UHI6 824 aaKnown RBP11.86□□□□□ -0.51
SEMA4D-201ENST00000339861 GOLGA8RI6L899 631 aa11.85□□□□□ -0.51
SEMA4D-201ENST00000339861 NEBLO76041 1014 aa11.85□□□□□ -0.51
SEMA4D-201ENST00000339861 SPATA31C1P0DKV0 1188 aa11.85□□□□□ -0.51
SEMA4D-201ENST00000339861 SREBF1P36956 1147 aa11.85□□□□□ -0.51
SEMA4D-201ENST00000339861 HSPA9P38646 679 aaKnown RBP11.85□□□□□ -0.51
SEMA4D-201ENST00000339861 CLUL1Q15846 466 aa11.85□□□□□ -0.51
SEMA4D-201ENST00000339861 SNRNP35Q16560 246 aaKnown RBP11.85□□□□□ -0.51
SEMA4D-201ENST00000339861 KRT39Q6A163 491 aa11.85□□□□□ -0.51
SEMA4D-201ENST00000339861 IQCKQ8N0W5 287 aa11.85□□□□□ -0.51
SEMA4D-201ENST00000339861 GRK7Q8WTQ7 553 aa11.85□□□□□ -0.51
SEMA4D-201ENST00000339861 CALR3Q96L12 384 aaKnown RBP11.85□□□□□ -0.51
SEMA4D-201ENST00000339861 PAGR1Q9BTK6 254 aa11.85□□□□□ -0.51
SEMA4D-201ENST00000339861 AJAP1Q9UKB5 411 aaPredicted RBP11.85□□□□□ -0.51
SEMA4D-201ENST00000339861 TRPC6Q9Y210 931 aa11.85□□□□□ -0.51
SEMA4D-201ENST00000339861 SPEF2Q9C093 1822 aa11.85□□□□□ -0.51
SEMA4D-201ENST00000339861 CRYBG1Q9Y4K1 1723 aa11.85□□□□□ -0.51
SEMA4D-201ENST00000339861 PHF2O75151 1096 aa11.85□□□□□ -0.51
SEMA4D-201ENST00000339861 MAPK7Q13164 816 aa11.85□□□□□ -0.51
SEMA4D-201ENST00000339861 BYSLQ13895 437 aaKnown RBP11.85□□□□□ -0.51
SEMA4D-201ENST00000339861 BBS9Q3SYG4 887 aa11.85□□□□□ -0.51
SEMA4D-201ENST00000339861 TMC3Q7Z5M5 1100 aa11.85□□□□□ -0.51
SEMA4D-201ENST00000339861 MCF2L2Q86YR7 1114 aa11.85□□□□□ -0.51
SEMA4D-201ENST00000339861 LRRC8CQ8TDW0 803 aa11.85□□□□□ -0.51
SEMA4D-201ENST00000339861 PITPNM3Q9BZ71 974 aa11.85□□□□□ -0.51
SEMA4D-201ENST00000339861 TUFT1Q9NNX1 390 aa11.85□□□□□ -0.51
SEMA4D-201ENST00000339861 TRAF3IP3Q9Y228 551 aa11.85□□□□□ -0.51
SEMA4D-201ENST00000339861 ASTN1O14525 1302 aa11.85□□□□□ -0.51
SEMA4D-201ENST00000339861 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.85□□□□□ -0.51
SEMA4D-201ENST00000339861 SRGAP2CP0DJJ0 459 aa11.85□□□□□ -0.51
SEMA4D-201ENST00000339861 IGBP1P78318 339 aa11.85□□□□□ -0.51
SEMA4D-201ENST00000339861 DCTN4Q9UJW0 460 aa11.85□□□□□ -0.51
SEMA4D-201ENST00000339861 TBX3O15119 743 aa11.84□□□□□ -0.51
SEMA4D-201ENST00000339861 RTN2O75298 545 aa11.84□□□□□ -0.51
SEMA4D-201ENST00000339861 HSPA6P17066 643 aa11.84□□□□□ -0.51
SEMA4D-201ENST00000339861 ITIH3Q06033 890 aa11.84□□□□□ -0.51
SEMA4D-201ENST00000339861 PPP2R5DQ14738 602 aa11.84□□□□□ -0.51
SEMA4D-201ENST00000339861 C4orf33Q8N1A6 199 aa11.84□□□□□ -0.51
SEMA4D-201ENST00000339861 CNKSR1Q969H4 720 aa11.84□□□□□ -0.51
SEMA4D-201ENST00000339861 CALN1Q9BXU9 219 aa11.84□□□□□ -0.51
SEMA4D-201ENST00000339861 TRPC5Q9UL62 973 aaPredicted RBP11.84□□□□□ -0.51
SEMA4D-201ENST00000339861 INTUQ9ULD6 942 aa11.84□□□□□ -0.51
SEMA4D-201ENST00000339861 TMEM120BA0PK00 339 aa11.84□□□□□ -0.51
SEMA4D-201ENST00000339861 FAM187AA6NFU0 413 aa11.84□□□□□ -0.51
SEMA4D-201ENST00000339861 FOXO6A8MYZ6 492 aa11.84□□□□□ -0.51
SEMA4D-201ENST00000339861 ADRA2BP18089 450 aa11.84□□□□□ -0.51
SEMA4D-201ENST00000339861 BASP1P80723 227 aaKnown RBP11.84□□□□□ -0.51
SEMA4D-201ENST00000339861 SPP2Q13103 211 aa11.84□□□□□ -0.51
SEMA4D-201ENST00000339861 LRIG3Q6UXM1 1119 aa11.84□□□□□ -0.51
SEMA4D-201ENST00000339861 FBXL13Q8NEE6 735 aa11.84□□□□□ -0.51
SEMA4D-201ENST00000339861 RUBCNQ92622 972 aa11.84□□□□□ -0.51
SEMA4D-201ENST00000339861 TGS1Q96RS0 853 aaKnown RBP11.84□□□□□ -0.51
SEMA4D-201ENST00000339861 DDX23Q9BUQ8 820 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms