RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 DIS3L2Q8IYB7 885 aaKnown RBP11.86□□□□□ -0.51
CAPN3-202ENST00000337571 HSD17B14Q9BPX1 270 aa11.86□□□□□ -0.51
CAPN3-202ENST00000337571 TMEM175Q9BSA9 504 aa11.86□□□□□ -0.51
CAPN3-202ENST00000337571 TRIM6Q9C030 488 aaPredicted RBP11.86□□□□□ -0.51
CAPN3-202ENST00000337571 ZBP1Q9H171 429 aa11.86□□□□□ -0.51
CAPN3-202ENST00000337571 MINDY3Q9H8M7 445 aa11.86□□□□□ -0.51
CAPN3-202ENST00000337571 DZANK1Q9NVP4 752 aa11.86□□□□□ -0.51
CAPN3-202ENST00000337571 DNAJB4Q9UDY4 337 aa11.86□□□□□ -0.51
CAPN3-202ENST00000337571 SSX2IPQ9Y2D8 614 aa11.86□□□□□ -0.51
CAPN3-202ENST00000337571 IRAK3Q9Y616 596 aa11.86□□□□□ -0.51
CAPN3-202ENST00000337571 FAM205CA6NFA0 338 aa11.85□□□□□ -0.51
CAPN3-202ENST00000337571 MEIS3P2A8K0S8 358 aa11.85□□□□□ -0.51
CAPN3-202ENST00000337571 NCLP19338 710 aaKnown RBP11.85□□□□□ -0.51
CAPN3-202ENST00000337571 ATP2B1P20020 1258 aa11.85□□□□□ -0.51
CAPN3-202ENST00000337571 SP100P23497 879 aaPredicted RBP11.85□□□□□ -0.51
CAPN3-202ENST00000337571 KLRC2P26717 231 aa11.85□□□□□ -0.51
CAPN3-202ENST00000337571 HOXA11P31270 313 aaPredicted RBP11.85□□□□□ -0.51
CAPN3-202ENST00000337571 SLC11A1P49279 550 aa11.85□□□□□ -0.51
CAPN3-202ENST00000337571 PTENP60484 403 aa11.85□□□□□ -0.51
CAPN3-202ENST00000337571 POU5F1BQ06416 359 aa11.85□□□□□ -0.51
CAPN3-202ENST00000337571 RARS2Q5T160 578 aaKnown RBP11.85□□□□□ -0.51
CAPN3-202ENST00000337571 ELMSAN1Q6PJG2 1045 aa11.85□□□□□ -0.51
CAPN3-202ENST00000337571 AGMOQ6ZNB7 445 aa11.85□□□□□ -0.51
CAPN3-202ENST00000337571 CABP7Q86V35 215 aa11.85□□□□□ -0.51
CAPN3-202ENST00000337571 ZNF280BQ86YH2 543 aa11.85□□□□□ -0.51
CAPN3-202ENST00000337571 NSUN7Q8NE18 718 aaKnown RBP11.85□□□□□ -0.51
CAPN3-202ENST00000337571 AUTS2Q8WXX7 1259 aa11.85□□□□□ -0.51
CAPN3-202ENST00000337571 TNFRSF25Q93038 417 aa11.85□□□□□ -0.51
CAPN3-202ENST00000337571 CCDC51Q96ER9 411 aa11.85□□□□□ -0.51
CAPN3-202ENST00000337571 MRPL17Q9NRX2 175 aaKnown RBP11.85□□□□□ -0.51
CAPN3-202ENST00000337571 DBR1Q9UK59 544 aaKnown RBP11.85□□□□□ -0.51
CAPN3-202ENST00000337571 ARID2Q68CP9 1835 aa11.85□□□□□ -0.51
CAPN3-202ENST00000337571 NRP1O14786 923 aa11.84□□□□□ -0.51
CAPN3-202ENST00000337571 DDHD2O94830 711 aa11.84□□□□□ -0.51
CAPN3-202ENST00000337571 LYPLA2O95372 231 aa11.84□□□□□ -0.51
CAPN3-202ENST00000337571 LARGE1O95461 756 aa11.84□□□□□ -0.51
CAPN3-202ENST00000337571 SSBP05455 408 aaKnown RBP eCLIP11.84□□□□□ -0.51
CAPN3-202ENST00000337571 MCM7P33993 719 aa11.84□□□□□ -0.51
CAPN3-202ENST00000337571 SIGLEC14Q08ET2 396 aa11.84□□□□□ -0.51
CAPN3-202ENST00000337571 GNL2Q13823 731 aaKnown RBP11.84□□□□□ -0.51
CAPN3-202ENST00000337571 PTPN21Q16825 1174 aa11.84□□□□□ -0.51
CAPN3-202ENST00000337571 UBXN11Q5T124 520 aa11.84□□□□□ -0.51
CAPN3-202ENST00000337571 TMEM173Q86WV6 379 aaPredicted RBP11.84□□□□□ -0.51
CAPN3-202ENST00000337571 ERMNQ8TAM6 284 aa11.84□□□□□ -0.51
CAPN3-202ENST00000337571 PIGOQ8TEQ8 1089 aa11.84□□□□□ -0.51
CAPN3-202ENST00000337571 FBXL18Q96ME1 805 aa11.84□□□□□ -0.51
CAPN3-202ENST00000337571 PRRX2Q99811 253 aa11.84□□□□□ -0.51
CAPN3-202ENST00000337571 CSRNP2Q9H175 543 aa11.84□□□□□ -0.51
CAPN3-202ENST00000337571 LIMCH1Q9UPQ0 1083 aa11.84□□□□□ -0.51
CAPN3-202ENST00000337571 IPPQ9Y573 584 aa11.84□□□□□ -0.51
CAPN3-202ENST00000337571 ARL5CA6NH57 179 aa11.83□□□□□ -0.52
CAPN3-202ENST00000337571 TSPAN1O60635 241 aa11.83□□□□□ -0.52
CAPN3-202ENST00000337571 JAK2O60674 1132 aa11.83□□□□□ -0.52
CAPN3-202ENST00000337571 EPCAMP16422 314 aa11.83□□□□□ -0.52
CAPN3-202ENST00000337571 ARL2P36404 184 aa11.83□□□□□ -0.52
CAPN3-202ENST00000337571 OR1G1P47890 313 aa11.83□□□□□ -0.52
CAPN3-202ENST00000337571 GUCY1B3Q02153 619 aa11.83□□□□□ -0.52
CAPN3-202ENST00000337571 TMEM132AQ24JP5 1023 aa11.83□□□□□ -0.52
CAPN3-202ENST00000337571 KIAA1841Q6NSI8 718 aa11.83□□□□□ -0.52
CAPN3-202ENST00000337571 MAMSTRQ6ZN01 415 aa11.83□□□□□ -0.52
CAPN3-202ENST00000337571 MAEAQ7L5Y9 396 aa11.83□□□□□ -0.52
CAPN3-202ENST00000337571 FBXL6Q8N531 539 aa11.83□□□□□ -0.52
CAPN3-202ENST00000337571 C12orf76Q8N812 135 aaPredicted RBP11.83□□□□□ -0.52
CAPN3-202ENST00000337571 SLC22A17Q8WUG5 538 aa11.83□□□□□ -0.52
CAPN3-202ENST00000337571 CPB2Q96IY4 423 aa11.83□□□□□ -0.52
CAPN3-202ENST00000337571 MTMR9Q96QG7 549 aa11.83□□□□□ -0.52
CAPN3-202ENST00000337571 NACC1Q96RE7 527 aa11.83□□□□□ -0.52
CAPN3-202ENST00000337571 GAD1Q99259 594 aa11.83□□□□□ -0.52
CAPN3-202ENST00000337571 COLEC11Q9BWP8 271 aa11.83□□□□□ -0.52
CAPN3-202ENST00000337571 APOL6Q9BWW8 343 aa11.83□□□□□ -0.52
CAPN3-202ENST00000337571 POMKQ9H5K3 350 aa11.83□□□□□ -0.52
CAPN3-202ENST00000337571 TUFT1Q9NNX1 390 aa11.83□□□□□ -0.52
CAPN3-202ENST00000337571 RTN4Q9NQC3 1192 aaKnown RBP11.83□□□□□ -0.52
CAPN3-202ENST00000337571 DPP7Q9UHL4 492 aa11.83□□□□□ -0.52
CAPN3-202ENST00000337571 A0A087WWV3 80 aa11.82□□□□□ -0.52
CAPN3-202ENST00000337571 LRRIQ4A6NIV6 560 aa11.82□□□□□ -0.52
CAPN3-202ENST00000337571 C2CD2LO14523 706 aa11.82□□□□□ -0.52
CAPN3-202ENST00000337571 URODP06132 367 aa11.82□□□□□ -0.52
CAPN3-202ENST00000337571 WEE2P0C1S8 567 aa11.82□□□□□ -0.52
CAPN3-202ENST00000337571 RARRES1P49788 294 aa11.82□□□□□ -0.52
CAPN3-202ENST00000337571 AFF1P51825 1210 aaKnown RBP11.82□□□□□ -0.52
CAPN3-202ENST00000337571 MBTD1Q05BQ5 628 aa11.82□□□□□ -0.52
CAPN3-202ENST00000337571 MTMR3Q13615 1198 aa11.82□□□□□ -0.52
CAPN3-202ENST00000337571 CAPSQ13938 189 aa11.82□□□□□ -0.52
CAPN3-202ENST00000337571 PTPN14Q15678 1187 aa11.82□□□□□ -0.52
CAPN3-202ENST00000337571 TMC5Q6UXY8 1006 aa11.82□□□□□ -0.52
CAPN3-202ENST00000337571 ALYREFQ86V81 257 aaKnown RBP11.82□□□□□ -0.52
CAPN3-202ENST00000337571 ZBTB8OSQ8IWT0 167 aa11.82□□□□□ -0.52
CAPN3-202ENST00000337571 UBALD2Q8IYN6 164 aa11.82□□□□□ -0.52
CAPN3-202ENST00000337571 TDRD5Q8NAT2 981 aaKnown RBP11.82□□□□□ -0.52
CAPN3-202ENST00000337571 FAM184AQ8NB25 1140 aa11.82□□□□□ -0.52
CAPN3-202ENST00000337571 KREMEN2Q8NCW0 462 aa11.82□□□□□ -0.52
CAPN3-202ENST00000337571 SMG8Q8ND04 991 aaKnown RBP11.82□□□□□ -0.52
CAPN3-202ENST00000337571 MCPH1Q8NEM0 835 aa11.82□□□□□ -0.52
CAPN3-202ENST00000337571 BCL7CQ8WUZ0 217 aaPredicted RBP11.82□□□□□ -0.52
CAPN3-202ENST00000337571 ACSF2Q96CM8 615 aaPredicted RBP11.82□□□□□ -0.52
CAPN3-202ENST00000337571 C8orf76Q96K31 380 aa11.82□□□□□ -0.52
CAPN3-202ENST00000337571 KLHL5Q96PQ7 755 aa11.82□□□□□ -0.52
CAPN3-202ENST00000337571 LLPHQ9BRT6 129 aaKnown RBP11.82□□□□□ -0.52
CAPN3-202ENST00000337571 EIF2AQ9BY44 585 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms