RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 TELO2Q9Y4R8 837 aa14.98□□□□□ -0.01
SF1-202ENST00000334944 ZHX2Q9Y6X8 837 aa14.98□□□□□ -0.01
SF1-202ENST00000334944 A6NNZ2 444 aa14.97□□□□□ -0.01
SF1-202ENST00000334944 PRLRP16471 622 aa14.97□□□□□ -0.01
SF1-202ENST00000334944 MAPK7Q13164 816 aa14.97□□□□□ -0.01
SF1-202ENST00000334944 TUBB8Q3ZCM7 444 aa14.97□□□□□ -0.01
SF1-202ENST00000334944 FEM1BQ9UK73 627 aa14.97□□□□□ -0.01
SF1-202ENST00000334944 FRMD4BQ9Y2L6 1034 aa14.97□□□□□ -0.01
SF1-202ENST00000334944 PCDHGC5Q9Y5F6 944 aa14.97□□□□□ -0.01
SF1-202ENST00000334944 FRMPD4Q14CM0 1322 aa14.97□□□□□ -0.01
SF1-202ENST00000334944 ASNSP08243 561 aa14.97□□□□□ -0.01
SF1-202ENST00000334944 SSR1P43307 286 aaKnown RBP14.97□□□□□ -0.01
SF1-202ENST00000334944 RPS6KA3P51812 740 aa14.97□□□□□ -0.01
SF1-202ENST00000334944 MTMR2Q13614 643 aa14.97□□□□□ -0.01
SF1-202ENST00000334944 TRIM68Q6AZZ1 485 aa14.97□□□□□ -0.01
SF1-202ENST00000334944 CCDC63Q8NA47 563 aa14.97□□□□□ -0.01
SF1-202ENST00000334944 LNX1Q8TBB1 728 aaPredicted RBP14.97□□□□□ -0.01
SF1-202ENST00000334944 CLEC4DQ8WXI8 215 aa14.97□□□□□ -0.01
SF1-202ENST00000334944 MYOZ2Q9NPC6 264 aa14.97□□□□□ -0.01
SF1-202ENST00000334944 NOVA2Q9UNW9 492 aaKnown RBP14.97□□□□□ -0.01
SF1-202ENST00000334944 TESPA1A2RU30 521 aaPredicted RBP14.96□□□□□ -0.01
SF1-202ENST00000334944 GOLGA6L10A6NI86 522 aa14.96□□□□□ -0.01
SF1-202ENST00000334944 MAP3K13O43283 966 aa14.96□□□□□ -0.01
SF1-202ENST00000334944 TRAPPC3O43617 180 aa14.96□□□□□ -0.01
SF1-202ENST00000334944 ZBTB7AO95365 584 aa14.96□□□□□ -0.01
SF1-202ENST00000334944 HMGB2P26583 209 aaKnown RBP14.96□□□□□ -0.01
SF1-202ENST00000334944 GCLMP48507 274 aa14.96□□□□□ -0.01
SF1-202ENST00000334944 RAB27AP51159 221 aa14.96□□□□□ -0.01
SF1-202ENST00000334944 RPS6P62753 249 aaKnown RBP14.96□□□□□ -0.01
SF1-202ENST00000334944 DRP2Q13474 957 aa14.96□□□□□ -0.01
SF1-202ENST00000334944 RPS6KA1Q15418 735 aa14.96□□□□□ -0.01
SF1-202ENST00000334944 PTGER2P43116 358 aa14.96□□□□□ -0.01
SF1-202ENST00000334944 ZNF746Q6NUN9 644 aaPredicted RBP14.96□□□□□ -0.01
SF1-202ENST00000334944 DAAM2Q86T65 1068 aa14.96□□□□□ -0.01
SF1-202ENST00000334944 IFT20Q8IY31 132 aa14.96□□□□□ -0.01
SF1-202ENST00000334944 CCT6BQ92526 530 aa14.96□□□□□ -0.01
SF1-202ENST00000334944 TAF4BQ92750 862 aa14.96□□□□□ -0.01
SF1-202ENST00000334944 IGSF9BQ9UPX0 1349 aa14.96□□□□□ -0.01
SF1-202ENST00000334944 A0A1B0GVG6 124 aa14.96□□□□□ -0.02
SF1-202ENST00000334944 F8VZ95 297 aa14.96□□□□□ -0.02
SF1-202ENST00000334944 SLC16A4O15374 487 aa14.96□□□□□ -0.02
SF1-202ENST00000334944 SMNDC1O75940 238 aaKnown RBP eCLIP14.96□□□□□ -0.021e-7■□□□□ 8.9
SF1-202ENST00000334944 ICAM1P05362 532 aa14.96□□□□□ -0.02
SF1-202ENST00000334944 PECAM1P16284 738 aaPredicted RBP14.96□□□□□ -0.02
SF1-202ENST00000334944 GALCP54803 685 aa14.96□□□□□ -0.02
SF1-202ENST00000334944 JAM2P57087 298 aa14.96□□□□□ -0.02
SF1-202ENST00000334944 MTMR1Q13613 665 aa14.96□□□□□ -0.02
SF1-202ENST00000334944 TKFCQ3LXA3 575 aa14.96□□□□□ -0.02
SF1-202ENST00000334944 ZC3H12AQ5D1E8 599 aaKnown RBP14.96□□□□□ -0.02
SF1-202ENST00000334944 PHLDB3Q6NSJ2 640 aa14.96□□□□□ -0.02
SF1-202ENST00000334944 FAM160B2Q86V87 743 aa14.96□□□□□ -0.02
SF1-202ENST00000334944 KAT5Q92993 513 aa14.96□□□□□ -0.02
SF1-202ENST00000334944 INPP4AQ96PE3 977 aaPredicted RBP14.96□□□□□ -0.02
SF1-202ENST00000334944 USP20Q9Y2K6 914 aa14.96□□□□□ -0.02
SF1-202ENST00000334944 SLC16A3O15427 465 aaKnown RBP14.95□□□□□ -0.02
SF1-202ENST00000334944 DHX15O43143 795 aaKnown RBP14.95□□□□□ -0.02
SF1-202ENST00000334944 ITGA4P13612 1032 aa14.95□□□□□ -0.02
SF1-202ENST00000334944 HOXA7P31268 230 aaPredicted RBP14.95□□□□□ -0.02
SF1-202ENST00000334944 COPB2P35606 906 aa14.95□□□□□ -0.02
SF1-202ENST00000334944 STAT1P42224 750 aa14.95□□□□□ -0.02
SF1-202ENST00000334944 KCNJ2P63252 427 aa14.95□□□□□ -0.02
SF1-202ENST00000334944 MYL7Q01449 175 aa14.95□□□□□ -0.02
SF1-202ENST00000334944 POTEAQ6S8J7 498 aa14.95□□□□□ -0.02
SF1-202ENST00000334944 KIF2BQ8N4N8 673 aa14.95□□□□□ -0.02
SF1-202ENST00000334944 INTS2Q9H0H0 1204 aaKnown RBP14.95□□□□□ -0.02
SF1-202ENST00000334944 EHMT1Q9H9B1 1298 aa14.95□□□□□ -0.02
SF1-202ENST00000334944 PIDD1Q9HB75 910 aa14.95□□□□□ -0.02
SF1-202ENST00000334944 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.95□□□□□ -0.02
SF1-202ENST00000334944 RIPK3Q9Y572 518 aa14.95□□□□□ -0.02
SF1-202ENST00000334944 FOXN3O00409 490 aaPredicted RBP14.95□□□□□ -0.02
SF1-202ENST00000334944 RAD51CO43502 376 aa14.95□□□□□ -0.02
SF1-202ENST00000334944 SLC26A4O43511 780 aa14.95□□□□□ -0.02
SF1-202ENST00000334944 H2AFZP0C0S5 128 aa14.95□□□□□ -0.02
SF1-202ENST00000334944 PEX3P56589 373 aa14.95□□□□□ -0.02
SF1-202ENST00000334944 GKAP1Q5VSY0 366 aaPredicted RBP14.95□□□□□ -0.02
SF1-202ENST00000334944 H2AFVQ71UI9 128 aa14.95□□□□□ -0.02
SF1-202ENST00000334944 MAGEC3Q8TD91 643 aa14.95□□□□□ -0.02
SF1-202ENST00000334944 SLC20A1Q8WUM9 679 aa14.95□□□□□ -0.02
SF1-202ENST00000334944 DDX47Q9H0S4 455 aaKnown RBP14.95□□□□□ -0.02
SF1-202ENST00000334944 STK38LQ9Y2H1 464 aa14.95□□□□□ -0.02
SF1-202ENST00000334944 GJA3Q9Y6H8 435 aa14.95□□□□□ -0.02
SF1-202ENST00000334944 EIF3DO15371 548 aaKnown RBP eCLIP14.94□□□□□ -0.02
SF1-202ENST00000334944 LINGO3P0C6S8 592 aa14.94□□□□□ -0.02
SF1-202ENST00000334944 MYZAPP0CAP1 466 aa14.94□□□□□ -0.02
SF1-202ENST00000334944 USP4Q13107 963 aa14.94□□□□□ -0.02
SF1-202ENST00000334944 PAK2Q13177 524 aa14.94□□□□□ -0.02
SF1-202ENST00000334944 PRPF4BQ13523 1007 aaKnown RBP14.94□□□□□ -0.02
SF1-202ENST00000334944 PEX26Q7Z412 305 aa14.94□□□□□ -0.02
SF1-202ENST00000334944 METTL13Q8N6R0 699 aa14.94□□□□□ -0.02
SF1-202ENST00000334944 SYTL5Q8TDW5 730 aaPredicted RBP14.94□□□□□ -0.02
SF1-202ENST00000334944 CCDC127Q96BQ5 260 aa14.94□□□□□ -0.02
SF1-202ENST00000334944 PSMD1Q99460 953 aa14.94□□□□□ -0.02
SF1-202ENST00000334944 EBF2Q9HAK2 575 aa14.94□□□□□ -0.02
SF1-202ENST00000334944 EMSYQ7Z589 1322 aa14.94□□□□□ -0.02
SF1-202ENST00000334944 HMGB1P1B2RPK0 211 aaPredicted RBP14.94□□□□□ -0.02
SF1-202ENST00000334944 PEX10O60683 326 aa14.94□□□□□ -0.02
SF1-202ENST00000334944 SOX5P35711 763 aa14.94□□□□□ -0.02
SF1-202ENST00000334944 MAGOHP61326 146 aaKnown RBP14.94□□□□□ -0.02
SF1-202ENST00000334944 PPP3CAQ08209 521 aa14.94□□□□□ -0.02
SF1-202ENST00000334944 GLE1Q53GS7 698 aaKnown RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms