RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 C2CD2Q9Y426 696 aa10.92□□□□□ -0.66
SPTBN1-201ENST00000333896 CDC42BPBQ9Y5S2 1711 aa10.92□□□□□ -0.66
SPTBN1-201ENST00000333896 BCL10O95999 233 aa10.92□□□□□ -0.66
SPTBN1-201ENST00000333896 MMP14P50281 582 aa10.92□□□□□ -0.66
SPTBN1-201ENST00000333896 PPIDQ08752 370 aaKnown RBP10.92□□□□□ -0.66
SPTBN1-201ENST00000333896 APOA5Q6Q788 366 aa10.92□□□□□ -0.66
SPTBN1-201ENST00000333896 SLC10A4Q96EP9 437 aa10.92□□□□□ -0.66
SPTBN1-201ENST00000333896 SMAD5Q99717 465 aaKnown RBP10.92□□□□□ -0.66
SPTBN1-201ENST00000333896 RPL26L1Q9UNX3 145 aaKnown RBP10.92□□□□□ -0.66
SPTBN1-201ENST00000333896 F8W8V4 182 aa10.92□□□□□ -0.66
SPTBN1-201ENST00000333896 GAS7O60861 476 aa10.92□□□□□ -0.66
SPTBN1-201ENST00000333896 MTRF1O75570 445 aaKnown RBP10.92□□□□□ -0.66
SPTBN1-201ENST00000333896 CHN1P15882 459 aa10.92□□□□□ -0.66
SPTBN1-201ENST00000333896 MAGEA8P43361 318 aa10.92□□□□□ -0.66
SPTBN1-201ENST00000333896 EPHB1P54762 984 aa10.92□□□□□ -0.66
SPTBN1-201ENST00000333896 FKBP3Q00688 224 aaKnown RBP10.92□□□□□ -0.66
SPTBN1-201ENST00000333896 RBM46Q8TBY0 533 aaKnown RBP10.92□□□□□ -0.66
SPTBN1-201ENST00000333896 XPO6Q96QU8 1125 aaKnown RBP10.92□□□□□ -0.66
SPTBN1-201ENST00000333896 RHOBTB2Q9BYZ6 727 aa10.92□□□□□ -0.66
SPTBN1-201ENST00000333896 DCTN4Q9UJW0 460 aa10.92□□□□□ -0.66
SPTBN1-201ENST00000333896 PA2G4Q9UQ80 394 aaKnown RBP10.92□□□□□ -0.66
SPTBN1-201ENST00000333896 FGGP02679 453 aa10.92□□□□□ -0.66
SPTBN1-201ENST00000333896 SRGAP2CP0DJJ0 459 aa10.92□□□□□ -0.66
SPTBN1-201ENST00000333896 RPS6KA3P51812 740 aa10.92□□□□□ -0.66
SPTBN1-201ENST00000333896 MYL7Q01449 175 aa10.92□□□□□ -0.66
SPTBN1-201ENST00000333896 ZFP1Q6P2D0 407 aa10.92□□□□□ -0.66
SPTBN1-201ENST00000333896 RIN3Q8TB24 985 aa10.92□□□□□ -0.66
SPTBN1-201ENST00000333896 IVNS1ABPQ9Y6Y0 642 aa10.92□□□□□ -0.66
SPTBN1-201ENST00000333896 CALB2P22676 271 aa10.91□□□□□ -0.66
SPTBN1-201ENST00000333896 ANKRD49Q8WVL7 239 aa10.91□□□□□ -0.66
SPTBN1-201ENST00000333896 MRPL1Q9BYD6 325 aaKnown RBP10.91□□□□□ -0.66
SPTBN1-201ENST00000333896 CCDC59Q9P031 241 aaKnown RBP10.91□□□□□ -0.66
SPTBN1-201ENST00000333896 ITIH6Q6UXX5 1313 aa10.91□□□□□ -0.66
SPTBN1-201ENST00000333896 DNMBPQ6XZF7 1577 aa10.91□□□□□ -0.66
SPTBN1-201ENST00000333896 KLHL41O60662 606 aa10.91□□□□□ -0.66
SPTBN1-201ENST00000333896 CWF19L1Q69YN2 538 aaKnown RBP10.91□□□□□ -0.66
SPTBN1-201ENST00000333896 LRRC49Q8IUZ0 686 aa10.91□□□□□ -0.66
SPTBN1-201ENST00000333896 PEX5LQ8IYB4 626 aa10.91□□□□□ -0.66
SPTBN1-201ENST00000333896 CALN1Q9BXU9 219 aa10.91□□□□□ -0.66
SPTBN1-201ENST00000333896 MOV10Q9HCE1 1003 aaKnown RBP10.91□□□□□ -0.66
SPTBN1-201ENST00000333896 PFASO15067 1338 aa10.91□□□□□ -0.66
SPTBN1-201ENST00000333896 ADAMTS2O95450 1211 aa10.91□□□□□ -0.66
SPTBN1-201ENST00000333896 UBTFL6P0CB48 400 aaPredicted RBP10.91□□□□□ -0.66
SPTBN1-201ENST00000333896 ACADVLP49748 655 aa10.91□□□□□ -0.66
SPTBN1-201ENST00000333896 ZNF507Q8TCN5 953 aa10.91□□□□□ -0.66
SPTBN1-201ENST00000333896 NUDT16Q96DE0 195 aaKnown RBP10.91□□□□□ -0.66
SPTBN1-201ENST00000333896 SPATA2Q9UM82 520 aa10.91□□□□□ -0.66
SPTBN1-201ENST00000333896 ARHGEF10O15013 1369 aa10.91□□□□□ -0.66
SPTBN1-201ENST00000333896 SAMD9Q5K651 1589 aa10.91□□□□□ -0.66
SPTBN1-201ENST00000333896 RTN3O95197 1032 aaPredicted RBP10.91□□□□□ -0.66
SPTBN1-201ENST00000333896 PCP11498 1178 aaKnown RBP10.91□□□□□ -0.66
SPTBN1-201ENST00000333896 LBRQ14739 615 aaKnown RBP10.91□□□□□ -0.66
SPTBN1-201ENST00000333896 KYNUQ16719 465 aa10.91□□□□□ -0.66
SPTBN1-201ENST00000333896 SUN5Q8TC36 379 aa10.91□□□□□ -0.66
SPTBN1-201ENST00000333896 S100ZQ8WXG8 99 aa10.91□□□□□ -0.66
SPTBN1-201ENST00000333896 PPP1R36Q96LQ0 422 aa10.91□□□□□ -0.66
SPTBN1-201ENST00000333896 MED23Q9ULK4 1368 aa10.91□□□□□ -0.66
SPTBN1-201ENST00000333896 ANXA1P04083 346 aa10.91□□□□□ -0.66
SPTBN1-201ENST00000333896 SNRPA1P09661 255 aaKnown RBP10.91□□□□□ -0.66
SPTBN1-201ENST00000333896 AKIRIN2Q53H80 203 aa10.91□□□□□ -0.66
SPTBN1-201ENST00000333896 CCNI2Q6ZMN8 369 aaPredicted RBP10.91□□□□□ -0.66
SPTBN1-201ENST00000333896 SPATA5Q8NB90 893 aa10.91□□□□□ -0.66
SPTBN1-201ENST00000333896 NLRP3Q96P20 1036 aa10.91□□□□□ -0.66
SPTBN1-201ENST00000333896 KCNF1Q9H3M0 494 aa10.91□□□□□ -0.66
SPTBN1-201ENST00000333896 EML4Q9HC35 981 aaKnown RBP10.91□□□□□ -0.66
SPTBN1-201ENST00000333896 AIPL1Q9NZN9 384 aa10.91□□□□□ -0.66
SPTBN1-201ENST00000333896 CCDC88AQ3V6T2 1871 aa10.91□□□□□ -0.66
SPTBN1-201ENST00000333896 H0YCG3 227 aa10.91□□□□□ -0.66
SPTBN1-201ENST00000333896 TECP42680 631 aa10.91□□□□□ -0.66
SPTBN1-201ENST00000333896 HSPA2P54652 639 aa10.91□□□□□ -0.66
SPTBN1-201ENST00000333896 PURAQ00577 322 aaKnown RBP10.91□□□□□ -0.66
SPTBN1-201ENST00000333896 LRRC36Q1X8D7 754 aa10.91□□□□□ -0.66
SPTBN1-201ENST00000333896 LPCAT2Q7L5N7 544 aa10.91□□□□□ -0.66
SPTBN1-201ENST00000333896 RMDN1Q96DB5 314 aa10.91□□□□□ -0.66
SPTBN1-201ENST00000333896 CCDC61Q9Y6R9 512 aa10.91□□□□□ -0.66
SPTBN1-201ENST00000333896 KRT1P04264 644 aa10.91□□□□□ -0.66
SPTBN1-201ENST00000333896 TRIP10Q15642 601 aa10.91□□□□□ -0.66
SPTBN1-201ENST00000333896 SGSM1Q2NKQ1 1148 aa10.91□□□□□ -0.66
SPTBN1-201ENST00000333896 RSRC2Q7L4I2 434 aaKnown RBP10.91□□□□□ -0.66
SPTBN1-201ENST00000333896 ZNF579Q8NAF0 562 aaKnown RBP10.91□□□□□ -0.66
SPTBN1-201ENST00000333896 SERTAD1Q9UHV2 236 aa10.91□□□□□ -0.66
SPTBN1-201ENST00000333896 ADGRG1Q9Y653 693 aa10.91□□□□□ -0.66
SPTBN1-201ENST00000333896 SMARCA1P28370 1054 aa10.9□□□□□ -0.66
SPTBN1-201ENST00000333896 PTK2Q05397 1052 aa10.9□□□□□ -0.66
SPTBN1-201ENST00000333896 DHX40Q8IX18 779 aaKnown RBP10.9□□□□□ -0.66
SPTBN1-201ENST00000333896 VAMP4O75379 141 aa10.9□□□□□ -0.66
SPTBN1-201ENST00000333896 TFCP2Q12800 502 aa10.9□□□□□ -0.66
SPTBN1-201ENST00000333896 MAPRE1Q15691 268 aaKnown RBP10.9□□□□□ -0.66
SPTBN1-201ENST00000333896 UBA2Q9UBT2 640 aaPredicted RBP10.9□□□□□ -0.66
SPTBN1-201ENST00000333896 SLC12A6Q9UHW9 1150 aa10.9□□□□□ -0.66
SPTBN1-201ENST00000333896 BIRC5O15392 142 aa10.9□□□□□ -0.66
SPTBN1-201ENST00000333896 MBD4O95243 580 aa10.9□□□□□ -0.66
SPTBN1-201ENST00000333896 MXD4Q14582 209 aaPredicted RBP10.9□□□□□ -0.66
SPTBN1-201ENST00000333896 CDC37Q16543 378 aaPredicted RBP10.9□□□□□ -0.66
SPTBN1-201ENST00000333896 SUPT20HQ8NEM7 779 aa10.9□□□□□ -0.66
SPTBN1-201ENST00000333896 ZC3H12CQ9C0D7 883 aaKnown RBP10.9□□□□□ -0.66
SPTBN1-201ENST00000333896 HPS4Q9NQG7 708 aa10.9□□□□□ -0.66
SPTBN1-201ENST00000333896 COPG2Q9UBF2 871 aa10.9□□□□□ -0.66
SPTBN1-201ENST00000333896 SNX12Q9UMY4 172 aa10.9□□□□□ -0.66
SPTBN1-201ENST00000333896 A0A1W2PQC6 194 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms