RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 PTGIRP43119 386 aa13.28□□□□□ -0.28
VPS33B-201ENST00000333371 KIF22Q14807 665 aa13.28□□□□□ -0.28
VPS33B-201ENST00000333371 CEP55Q53EZ4 464 aa13.28□□□□□ -0.28
VPS33B-201ENST00000333371 CDAN1Q8IWY9 1227 aa13.28□□□□□ -0.28
VPS33B-201ENST00000333371 NIM1KQ8IY84 436 aa13.28□□□□□ -0.28
VPS33B-201ENST00000333371 EPS8L3Q8TE67 593 aaKnown RBP13.28□□□□□ -0.28
VPS33B-201ENST00000333371 TATDN2Q93075 761 aa13.28□□□□□ -0.28
VPS33B-201ENST00000333371 CCDC114Q96M63 670 aa13.28□□□□□ -0.28
VPS33B-201ENST00000333371 SLC40A1Q9NP59 571 aa13.28□□□□□ -0.28
VPS33B-201ENST00000333371 GOLGA6L10A0A0M3HER8 536 aa13.28□□□□□ -0.28
VPS33B-201ENST00000333371 ARHGEF35A5YM69 484 aa13.28□□□□□ -0.28
VPS33B-201ENST00000333371 FOXO6A8MYZ6 492 aa13.28□□□□□ -0.28
VPS33B-201ENST00000333371 PIK3CDO00329 1044 aa13.28□□□□□ -0.28
VPS33B-201ENST00000333371 PYGMP11217 842 aa13.28□□□□□ -0.28
VPS33B-201ENST00000333371 DRD4P21917 467 aa13.28□□□□□ -0.28
VPS33B-201ENST00000333371 C1orf220Q5T0J3 134 aa13.28□□□□□ -0.28
VPS33B-201ENST00000333371 BTNL9Q6UXG8 535 aa13.28□□□□□ -0.28
VPS33B-201ENST00000333371 DEFB132Q7Z7B7 95 aa13.28□□□□□ -0.28
VPS33B-201ENST00000333371 FAM151AQ8WW52 585 aa13.28□□□□□ -0.28
VPS33B-201ENST00000333371 NACC1Q96RE7 527 aa13.28□□□□□ -0.28
VPS33B-201ENST00000333371 JPH2Q9BR39 696 aaPredicted RBP13.28□□□□□ -0.28
VPS33B-201ENST00000333371 ADAM7Q9H2U9 754 aa13.28□□□□□ -0.28
VPS33B-201ENST00000333371 HAUS2Q9NVX0 235 aa13.28□□□□□ -0.28
VPS33B-201ENST00000333371 POLR2MP0CAP2 368 aa13.27□□□□□ -0.28
VPS33B-201ENST00000333371 CCDC25Q86WR0 208 aa13.27□□□□□ -0.28
VPS33B-201ENST00000333371 CACNA2D3Q8IZS8 1091 aa13.27□□□□□ -0.28
VPS33B-201ENST00000333371 XPO6Q96QU8 1125 aaKnown RBP13.27□□□□□ -0.28
VPS33B-201ENST00000333371 PABPC3Q9H361 631 aaKnown RBP13.27□□□□□ -0.28
VPS33B-201ENST00000333371 ATP8B3O60423 1300 aa13.27□□□□□ -0.28
VPS33B-201ENST00000333371 IPO5O00410 1097 aaKnown RBP13.27□□□□□ -0.29
VPS33B-201ENST00000333371 IFNAR2P48551 515 aa13.27□□□□□ -0.29
VPS33B-201ENST00000333371 ANKRD20A8PQ5CZ79 823 aa13.27□□□□□ -0.29
VPS33B-201ENST00000333371 DENND2CQ68D51 928 aa13.27□□□□□ -0.29
VPS33B-201ENST00000333371 CCDC137Q6PK04 289 aaKnown RBP13.27□□□□□ -0.29
VPS33B-201ENST00000333371 PADI6Q6TGC4 694 aa13.27□□□□□ -0.29
VPS33B-201ENST00000333371 NOP9Q86U38 636 aaKnown RBP13.27□□□□□ -0.29
VPS33B-201ENST00000333371 SLC47A2Q86VL8 602 aa13.27□□□□□ -0.29
VPS33B-201ENST00000333371 NEK9Q8TD19 979 aa13.27□□□□□ -0.29
VPS33B-201ENST00000333371 GLIS2Q9BZE0 524 aaPredicted RBP13.27□□□□□ -0.29
VPS33B-201ENST00000333371 CCDC113Q9H0I3 377 aa13.27□□□□□ -0.29
VPS33B-201ENST00000333371 GPRC5CQ9NQ84 441 aa13.27□□□□□ -0.29
VPS33B-201ENST00000333371 KLC4Q9NSK0 619 aa13.27□□□□□ -0.29
VPS33B-201ENST00000333371 DBR1Q9UK59 544 aaKnown RBP13.27□□□□□ -0.29
VPS33B-201ENST00000333371 CYP26A1O43174 497 aa13.26□□□□□ -0.29
VPS33B-201ENST00000333371 MMEP08473 750 aa13.26□□□□□ -0.29
VPS33B-201ENST00000333371 PAEPP09466 180 aa13.26□□□□□ -0.29
VPS33B-201ENST00000333371 CHRNB2P17787 502 aa13.26□□□□□ -0.29
VPS33B-201ENST00000333371 PPP2R5AQ15172 486 aa13.26□□□□□ -0.29
VPS33B-201ENST00000333371 NFIL3Q16649 462 aa13.26□□□□□ -0.29
VPS33B-201ENST00000333371 ERMARDQ5T6L9 678 aa13.26□□□□□ -0.29
VPS33B-201ENST00000333371 PHLDB2Q86SQ0 1253 aa13.26□□□□□ -0.29
VPS33B-201ENST00000333371 IL31RAQ8NI17 732 aa13.26□□□□□ -0.29
VPS33B-201ENST00000333371 ZSWIM1Q9BR11 485 aa13.26□□□□□ -0.29
VPS33B-201ENST00000333371 STK24Q9Y6E0 443 aa13.26□□□□□ -0.29
VPS33B-201ENST00000333371 PHF2O75151 1096 aa13.26□□□□□ -0.29
VPS33B-201ENST00000333371 RASSF9O75901 435 aa13.26□□□□□ -0.29
VPS33B-201ENST00000333371 ITGB5P18084 799 aa13.26□□□□□ -0.29
VPS33B-201ENST00000333371 VAMP7P51809 220 aa13.26□□□□□ -0.29
VPS33B-201ENST00000333371 SPDYE2Q495Y8 402 aa13.26□□□□□ -0.29
VPS33B-201ENST00000333371 CEP89Q96ST8 783 aa13.26□□□□□ -0.29
VPS33B-201ENST00000333371 STRA6Q9BX79 667 aa13.26□□□□□ -0.29
VPS33B-201ENST00000333371 DNAJC17Q9NVM6 304 aaKnown RBP13.26□□□□□ -0.29
VPS33B-201ENST00000333371 ZNRF3Q9ULT6 936 aa13.26□□□□□ -0.29
VPS33B-201ENST00000333371 C5orf60A6NFR6 353 aa13.26□□□□□ -0.29
VPS33B-201ENST00000333371 SRRM3A6NNA2 597 aaPredicted RBP13.26□□□□□ -0.29
VPS33B-201ENST00000333371 BCRP11274 1271 aa13.26□□□□□ -0.29
VPS33B-201ENST00000333371 PEX5P50542 639 aa13.26□□□□□ -0.29
VPS33B-201ENST00000333371 MAP2K1Q02750 393 aaPredicted RBP13.26□□□□□ -0.29
VPS33B-201ENST00000333371 GKAP1Q5VSY0 366 aaPredicted RBP13.26□□□□□ -0.29
VPS33B-201ENST00000333371 PPM1KQ8N3J5 372 aa13.26□□□□□ -0.29
VPS33B-201ENST00000333371 KREMEN1Q96MU8 473 aa13.26□□□□□ -0.29
VPS33B-201ENST00000333371 GMLQ99445 158 aa13.26□□□□□ -0.29
VPS33B-201ENST00000333371 WDR11Q9BZH6 1224 aa13.26□□□□□ -0.29
VPS33B-201ENST00000333371 FAM129AQ9BZQ8 928 aa13.26□□□□□ -0.29
VPS33B-201ENST00000333371 SEL1LQ9UBV2 794 aa13.26□□□□□ -0.29
VPS33B-201ENST00000333371 SYNPO2Q9UMS6 1093 aa13.26□□□□□ -0.29
VPS33B-201ENST00000333371 SCAF8Q9UPN6 1271 aaKnown RBP13.26□□□□□ -0.29
VPS33B-201ENST00000333371 TRPC6Q9Y210 931 aa13.26□□□□□ -0.29
VPS33B-201ENST00000333371 ADRB2P07550 413 aa13.25□□□□□ -0.29
VPS33B-201ENST00000333371 SCTRP47872 440 aa13.25□□□□□ -0.29
VPS33B-201ENST00000333371 GPC5P78333 572 aa13.25□□□□□ -0.29
VPS33B-201ENST00000333371 MIGA2Q7L4E1 593 aa13.25□□□□□ -0.29
VPS33B-201ENST00000333371 OTUD6AQ7L8S5 288 aa13.25□□□□□ -0.29
VPS33B-201ENST00000333371 CCDC105Q8IYK2 499 aa13.25□□□□□ -0.29
VPS33B-201ENST00000333371 GPATCH11Q8N954 259 aa13.25□□□□□ -0.29
VPS33B-201ENST00000333371 ATXN2LQ8WWM7 1075 aaKnown RBP13.25□□□□□ -0.29
VPS33B-201ENST00000333371 SEMA4DQ92854 862 aa13.25□□□□□ -0.29
VPS33B-201ENST00000333371 CCDC127Q96BQ5 260 aa13.25□□□□□ -0.29
VPS33B-201ENST00000333371 CHMP6Q96FZ7 201 aa13.25□□□□□ -0.29
VPS33B-201ENST00000333371 NAP1L3Q99457 506 aaPredicted RBP13.25□□□□□ -0.29
VPS33B-201ENST00000333371 PRMT1Q99873 361 aaKnown RBP13.25□□□□□ -0.29
VPS33B-201ENST00000333371 KIFC3Q9BVG8 833 aa13.25□□□□□ -0.29
VPS33B-201ENST00000333371 TMEM39BQ9GZU3 492 aa13.25□□□□□ -0.29
VPS33B-201ENST00000333371 COL20A1Q9P218 1284 aa13.25□□□□□ -0.29
VPS33B-201ENST00000333371 GGT7Q9UJ14 662 aa13.25□□□□□ -0.29
VPS33B-201ENST00000333371 ODF2LQ9ULJ1 636 aa13.25□□□□□ -0.29
VPS33B-201ENST00000333371 PCDHA3Q9Y5H8 950 aa13.25□□□□□ -0.29
VPS33B-201ENST00000333371 FAM187AA6NFU0 413 aa13.25□□□□□ -0.29
VPS33B-201ENST00000333371 RGS16O15492 202 aaPredicted RBP13.25□□□□□ -0.29
VPS33B-201ENST00000333371 CCDC172P0C7W6 258 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms