RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 ZNF268Q14587 947 aaPredicted RBP25.39■■□□□ 1.65
TSKU-201ENST00000333090 FAM178BQ8IXR5 827 aa25.39■■□□□ 1.65
TSKU-201ENST00000333090 ARHGEF2Q92974 986 aaKnown RBP25.39■■□□□ 1.65
TSKU-201ENST00000333090 ART4Q93070 314 aa25.39■■□□□ 1.65
TSKU-201ENST00000333090 RUNDC3BQ96NL0 473 aa25.39■■□□□ 1.65
TSKU-201ENST00000333090 PFASO15067 1338 aa25.38■■□□□ 1.65
TSKU-201ENST00000333090 TMEM120BA0PK00 339 aa25.38■■□□□ 1.65
TSKU-201ENST00000333090 EXOC3O60645 756 aa25.38■■□□□ 1.65
TSKU-201ENST00000333090 PEX5P50542 639 aa25.38■■□□□ 1.65
TSKU-201ENST00000333090 ALDH5A1P51649 535 aaPredicted RBP25.38■■□□□ 1.65
TSKU-201ENST00000333090 HADHBP55084 474 aaKnown RBP25.38■■□□□ 1.65
TSKU-201ENST00000333090 GPC5P78333 572 aa25.38■■□□□ 1.65
TSKU-201ENST00000333090 IKQ13123 557 aaPredicted RBP25.38■■□□□ 1.65
TSKU-201ENST00000333090 NUGGCQ68CJ6 796 aa25.38■■□□□ 1.65
TSKU-201ENST00000333090 C1orf186Q6ZWK4 172 aa25.38■■□□□ 1.65
TSKU-201ENST00000333090 PASKQ96RG2 1323 aa25.38■■□□□ 1.65
TSKU-201ENST00000333090 BCRP11274 1271 aa25.38■■□□□ 1.65
TSKU-201ENST00000333090 CALCOCO2Q13137 446 aa25.38■■□□□ 1.65
TSKU-201ENST00000333090 DOK7Q18PE1 504 aa25.38■■□□□ 1.65
TSKU-201ENST00000333090 MFSD5Q6N075 450 aa25.38■■□□□ 1.65
TSKU-201ENST00000333090 CPNE8Q86YQ8 564 aa25.38■■□□□ 1.65
TSKU-201ENST00000333090 RPUSD2Q8IZ73 545 aaKnown RBP25.38■■□□□ 1.65
TSKU-201ENST00000333090 KIF2BQ8N4N8 673 aa25.38■■□□□ 1.65
TSKU-201ENST00000333090 ANKRD42Q8N9B4 389 aa25.38■■□□□ 1.65
TSKU-201ENST00000333090 POP1Q99575 1024 aaKnown RBP25.38■■□□□ 1.65
TSKU-201ENST00000333090 MTUS1Q9ULD2 1270 aa25.38■■□□□ 1.65
TSKU-201ENST00000333090 IGF2BP3O00425 579 aaKnown RBP eCLIP25.37■■□□□ 1.65
TSKU-201ENST00000333090 ALAS1P13196 640 aa25.37■■□□□ 1.65
TSKU-201ENST00000333090 MAP2K1Q02750 393 aaPredicted RBP25.37■■□□□ 1.65
TSKU-201ENST00000333090 BFSP1Q12934 665 aa25.37■■□□□ 1.65
TSKU-201ENST00000333090 PPP2R5AQ15172 486 aa25.37■■□□□ 1.65
TSKU-201ENST00000333090 NFIL3Q16649 462 aa25.37■■□□□ 1.65
TSKU-201ENST00000333090 ZNF720Q7Z2F6 126 aa25.37■■□□□ 1.65
TSKU-201ENST00000333090 CDC42EP4Q9H3Q1 356 aaKnown RBP25.37■■□□□ 1.65
TSKU-201ENST00000333090 SUN1O94901 812 aa25.37■■□□□ 1.65
TSKU-201ENST00000333090 OAS1P00973 400 aaKnown RBP25.37■■□□□ 1.65
TSKU-201ENST00000333090 SLC15A2Q16348 729 aa25.37■■□□□ 1.65
TSKU-201ENST00000333090 KLHL29Q96CT2 875 aa25.37■■□□□ 1.65
TSKU-201ENST00000333090 DYDC2Q96IM9 177 aa25.37■■□□□ 1.65
TSKU-201ENST00000333090 C15orf41Q9Y2V0 281 aa25.37■■□□□ 1.65
TSKU-201ENST00000333090 GGPS1O95749 300 aa25.36■■□□□ 1.65
TSKU-201ENST00000333090 CHRM1P11229 460 aaPredicted RBP25.36■■□□□ 1.65
TSKU-201ENST00000333090 SLC13A5Q86YT5 568 aaPredicted RBP25.36■■□□□ 1.65
TSKU-201ENST00000333090 CCHCR1Q8TD31 782 aa25.36■■□□□ 1.65
TSKU-201ENST00000333090 PRCCQ92733 491 aaPredicted RBP25.36■■□□□ 1.65
TSKU-201ENST00000333090 BTBD6Q96KE9 485 aa25.36■■□□□ 1.65
TSKU-201ENST00000333090 GJD4Q96KN9 370 aaPredicted RBP25.36■■□□□ 1.65
TSKU-201ENST00000333090 KCNK9Q9NPC2 374 aa25.36■■□□□ 1.65
TSKU-201ENST00000333090 FOXO6A8MYZ6 492 aa25.36■■□□□ 1.65
TSKU-201ENST00000333090 HGSO14964 777 aaPredicted RBP25.36■■□□□ 1.65
TSKU-201ENST00000333090 SPOPO43791 374 aa25.36■■□□□ 1.65
TSKU-201ENST00000333090 ODR4Q5SWX8 454 aa25.36■■□□□ 1.65
TSKU-201ENST00000333090 MEX3CQ5U5Q3 659 aaKnown RBP25.36■■□□□ 1.65
TSKU-201ENST00000333090 FBXO11Q86XK2 927 aa25.36■■□□□ 1.65
TSKU-201ENST00000333090 SEPT12Q8IYM1 358 aa25.36■■□□□ 1.65
TSKU-201ENST00000333090 RPS6KC1Q96S38 1066 aa25.36■■□□□ 1.65
TSKU-201ENST00000333090 FIZ1Q96SL8 496 aa25.36■■□□□ 1.65
TSKU-201ENST00000333090 DMAC2Q9NW81 257 aa25.36■■□□□ 1.65
TSKU-201ENST00000333090 PCDHAC2Q9Y5I4 1007 aa25.36■■□□□ 1.65
TSKU-201ENST00000333090 FOCADQ5VW36 1801 aa25.36■■□□□ 1.65
TSKU-201ENST00000333090 FOSP01100 380 aaPredicted RBP25.36■■□□□ 1.65
TSKU-201ENST00000333090 ZKSCAN8Q15776 578 aaPredicted RBP25.36■■□□□ 1.65
TSKU-201ENST00000333090 SYCP3Q8IZU3 236 aa25.36■■□□□ 1.65
TSKU-201ENST00000333090 CERS5Q8N5B7 392 aa25.36■■□□□ 1.65
TSKU-201ENST00000333090 LMO3Q8TAP4 145 aa25.36■■□□□ 1.65
TSKU-201ENST00000333090 HSD17B14Q9BPX1 270 aa25.36■■□□□ 1.65
TSKU-201ENST00000333090 ROPN1BQ9BZX4 212 aaPredicted RBP25.36■■□□□ 1.65
TSKU-201ENST00000333090 ROPN1Q9HAT0 212 aaPredicted RBP25.36■■□□□ 1.65
TSKU-201ENST00000333090 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.36■■□□□ 1.653e-13■■■■■ 337.8
TSKU-201ENST00000333090 TULP1O00294 542 aaPredicted RBP25.35■■□□□ 1.65
TSKU-201ENST00000333090 SLITRK3O94933 977 aa25.35■■□□□ 1.65
TSKU-201ENST00000333090 DLG4P78352 724 aa25.35■■□□□ 1.65
TSKU-201ENST00000333090 NFIAQ12857 509 aa25.35■■□□□ 1.65
TSKU-201ENST00000333090 CRY2Q49AN0 593 aa25.35■■□□□ 1.65
TSKU-201ENST00000333090 CYFIP1Q7L576 1253 aa25.35■■□□□ 1.65
TSKU-201ENST00000333090 ARHGEF19Q8IW93 802 aa25.35■■□□□ 1.65
TSKU-201ENST00000333090 GDAP1Q8TB36 358 aa25.35■■□□□ 1.65
TSKU-201ENST00000333090 DCAF4Q8WV16 495 aa25.35■■□□□ 1.65
TSKU-201ENST00000333090 CTNNAL1Q9UBT7 734 aa25.35■■□□□ 1.65
TSKU-201ENST00000333090 STK38LQ9Y2H1 464 aa25.35■■□□□ 1.65
TSKU-201ENST00000333090 ECEL1O95672 775 aa25.35■■□□□ 1.65
TSKU-201ENST00000333090 CACNB3P54284 484 aa25.35■■□□□ 1.65
TSKU-201ENST00000333090 WNT8AQ9H1J5 351 aa25.35■■□□□ 1.65
TSKU-201ENST00000333090 ZNF831Q5JPB2 1677 aa25.34■■□□□ 1.65
TSKU-201ENST00000333090 CIITAP33076 1130 aa25.34■■□□□ 1.65
TSKU-201ENST00000333090 ZNF131P52739 623 aa25.34■■□□□ 1.65
TSKU-201ENST00000333090 COPS2P61201 443 aa25.34■■□□□ 1.65
TSKU-201ENST00000333090 RBM17Q96I25 401 aaKnown RBP25.34■■□□□ 1.65
TSKU-201ENST00000333090 L3MBTL3Q96JM7 780 aaPredicted RBP25.34■■□□□ 1.65
TSKU-201ENST00000333090 KCNQ5Q9NR82 932 aa25.34■■□□□ 1.65
TSKU-201ENST00000333090 DNAJC17Q9NVM6 304 aaKnown RBP25.34■■□□□ 1.65
TSKU-201ENST00000333090 PNMA3Q9UL41 463 aa25.34■■□□□ 1.65
TSKU-201ENST00000333090 EMSYQ7Z589 1322 aa25.34■■□□□ 1.65
TSKU-201ENST00000333090 A8MUI8 341 aa25.34■■□□□ 1.65
TSKU-201ENST00000333090 NEBLO76041 1014 aa25.34■■□□□ 1.65
TSKU-201ENST00000333090 CYP1B1Q16678 543 aa25.34■■□□□ 1.65
TSKU-201ENST00000333090 GALNTL6Q49A17 601 aa25.34■■□□□ 1.65
TSKU-201ENST00000333090 VSTM1Q6UX27 236 aa25.34■■□□□ 1.65
TSKU-201ENST00000333090 STXBP4Q6ZWJ1 553 aa25.34■■□□□ 1.65
TSKU-201ENST00000333090 TRMT10CQ7L0Y3 403 aaKnown RBP25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms