RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 MIPOL1Q8TD10 442 aa19.47■□□□□ 0.71
PKP3-201ENST00000331563 TBCKQ8TEA7 893 aa19.47■□□□□ 0.71
PKP3-201ENST00000331563 RAD54LQ92698 747 aa19.47■□□□□ 0.71
PKP3-201ENST00000331563 C18orf8Q96DM3 657 aa19.47■□□□□ 0.71
PKP3-201ENST00000331563 TMEM237Q96Q45 408 aa19.47■□□□□ 0.71
PKP3-201ENST00000331563 VCXQ9H320 206 aa19.47■□□□□ 0.71
PKP3-201ENST00000331563 RAD21O60216 631 aa19.46■□□□□ 0.71
PKP3-201ENST00000331563 WFS1O76024 890 aa19.46■□□□□ 0.71
PKP3-201ENST00000331563 AKR1B1P15121 316 aa19.46■□□□□ 0.71
PKP3-201ENST00000331563 PLCG2P16885 1265 aa19.46■□□□□ 0.71
PKP3-201ENST00000331563 GNAZP19086 355 aa19.46■□□□□ 0.71
PKP3-201ENST00000331563 MAPK7Q13164 816 aa19.46■□□□□ 0.71
PKP3-201ENST00000331563 CALCRLQ16602 461 aa19.46■□□□□ 0.71
PKP3-201ENST00000331563 RNF220Q5VTB9 566 aa19.46■□□□□ 0.71
PKP3-201ENST00000331563 KRT79Q5XKE5 535 aa19.46■□□□□ 0.71
PKP3-201ENST00000331563 CDC42EP5Q6NZY7 148 aa19.46■□□□□ 0.71
PKP3-201ENST00000331563 APBB1IPQ7Z5R6 666 aaPredicted RBP19.46■□□□□ 0.71
PKP3-201ENST00000331563 SLFN11Q7Z7L1 901 aa19.46■□□□□ 0.71
PKP3-201ENST00000331563 STK32AQ8WU08 396 aa19.46■□□□□ 0.71
PKP3-201ENST00000331563 CEP63Q96MT8 703 aa19.46■□□□□ 0.71
PKP3-201ENST00000331563 PPP1R9AQ9ULJ8 1098 aa19.46■□□□□ 0.71
PKP3-201ENST00000331563 ADAMTSL1Q8N6G6 1762 aa19.46■□□□□ 0.71
PKP3-201ENST00000331563 SMCO2A6NFE2 343 aa19.46■□□□□ 0.71
PKP3-201ENST00000331563 KLRF2D3W0D1 207 aa19.46■□□□□ 0.71
PKP3-201ENST00000331563 RIPK2O43353 540 aa19.46■□□□□ 0.71
PKP3-201ENST00000331563 SETDB1Q15047 1291 aa19.46■□□□□ 0.71
PKP3-201ENST00000331563 DNAJC9Q8WXX5 260 aa19.46■□□□□ 0.71
PKP3-201ENST00000331563 ZWILCHQ9H900 591 aa19.46■□□□□ 0.71
PKP3-201ENST00000331563 BMP2KQ9NSY1 1161 aaPredicted RBP19.46■□□□□ 0.71
PKP3-201ENST00000331563 PHF24Q9UPV7 400 aa19.46■□□□□ 0.71
PKP3-201ENST00000331563 COL11A2P13942 1736 aaPredicted RBP19.46■□□□□ 0.7
PKP3-201ENST00000331563 USP17L5A8MUK1 530 aa19.45■□□□□ 0.7
PKP3-201ENST00000331563 SP100P23497 879 aaPredicted RBP19.45■□□□□ 0.7
PKP3-201ENST00000331563 CD151P48509 253 aa19.45■□□□□ 0.7
PKP3-201ENST00000331563 PEX5P50542 639 aa19.45■□□□□ 0.7
PKP3-201ENST00000331563 DHX34Q14147 1143 aaKnown RBP19.45■□□□□ 0.7
PKP3-201ENST00000331563 TCERG1LQ5VWI1 586 aa19.45■□□□□ 0.7
PKP3-201ENST00000331563 APOBEC3HQ6NTF7 200 aaKnown RBP19.45■□□□□ 0.7
PKP3-201ENST00000331563 DAGLBQ8NCG7 672 aa19.45■□□□□ 0.7
PKP3-201ENST00000331563 KIFAP3Q92845 792 aa19.45■□□□□ 0.7
PKP3-201ENST00000331563 LRRC27Q9C0I9 530 aa19.45■□□□□ 0.7
PKP3-201ENST00000331563 BIN2Q9UBW5 565 aaPredicted RBP19.45■□□□□ 0.7
PKP3-201ENST00000331563 SNED1Q8TER0 1413 aa19.45■□□□□ 0.7
PKP3-201ENST00000331563 NAV1Q8NEY1 1877 aa19.45■□□□□ 0.7
PKP3-201ENST00000331563 SLX4Q8IY92 1834 aa19.45■□□□□ 0.7
PKP3-201ENST00000331563 FOXO6A8MYZ6 492 aa19.45■□□□□ 0.7
PKP3-201ENST00000331563 ATP6V1G1O75348 118 aa19.45■□□□□ 0.7
PKP3-201ENST00000331563 ACSL3O95573 720 aa19.45■□□□□ 0.7
PKP3-201ENST00000331563 RPL21P46778 160 aaKnown RBP19.45■□□□□ 0.7
PKP3-201ENST00000331563 GALCP54803 685 aa19.45■□□□□ 0.7
PKP3-201ENST00000331563 CACNB1Q02641 598 aaPredicted RBP19.45■□□□□ 0.7
PKP3-201ENST00000331563 SFSWAPQ12872 951 aaKnown RBP19.45■□□□□ 0.7
PKP3-201ENST00000331563 DCAF17Q5H9S7 520 aaPredicted RBP19.45■□□□□ 0.7
PKP3-201ENST00000331563 BTNL9Q6UXG8 535 aa19.45■□□□□ 0.7
PKP3-201ENST00000331563 SLF2Q8IX21 1173 aa19.45■□□□□ 0.7
PKP3-201ENST00000331563 FLAD1Q8NFF5 587 aa19.45■□□□□ 0.7
PKP3-201ENST00000331563 UTP4Q969X6 686 aaKnown RBP19.45■□□□□ 0.7
PKP3-201ENST00000331563 CYP39A1Q9NYL5 469 aa19.45■□□□□ 0.7
PKP3-201ENST00000331563 GH1P01241 217 aa19.44■□□□□ 0.7
PKP3-201ENST00000331563 TPBGLP0DKB5 382 aa19.44■□□□□ 0.7
PKP3-201ENST00000331563 CCNB1P14635 433 aa19.44■□□□□ 0.7
PKP3-201ENST00000331563 TARSP26639 723 aaKnown RBP19.44■□□□□ 0.7
PKP3-201ENST00000331563 EXOC3L4Q17RC7 722 aa19.44■□□□□ 0.7
PKP3-201ENST00000331563 ZCWPW2Q504Y3 356 aa19.44■□□□□ 0.7
PKP3-201ENST00000331563 FAM47EQ6ZV65 393 aa19.44■□□□□ 0.7
PKP3-201ENST00000331563 KCNK18Q7Z418 384 aa19.44■□□□□ 0.7
PKP3-201ENST00000331563 RAB34Q9BZG1 259 aa19.44■□□□□ 0.7
PKP3-201ENST00000331563 C6orf50Q9HD87 102 aa19.44■□□□□ 0.7
PKP3-201ENST00000331563 TMOD4Q9NZQ9 345 aa19.44■□□□□ 0.7
PKP3-201ENST00000331563 ARMCX3Q9UH62 379 aaPredicted RBP19.44■□□□□ 0.7
PKP3-201ENST00000331563 HDAC9Q9UKV0 1011 aa19.44■□□□□ 0.7
PKP3-201ENST00000331563 PTPN22Q9Y2R2 807 aa19.44■□□□□ 0.7
PKP3-201ENST00000331563 CETN3O15182 167 aa19.44■□□□□ 0.7
PKP3-201ENST00000331563 PTDSS1P48651 473 aaKnown RBP19.44■□□□□ 0.7
PKP3-201ENST00000331563 SLC35G2Q8TBE7 412 aa19.44■□□□□ 0.7
PKP3-201ENST00000331563 FGD4Q96M96 766 aa19.44■□□□□ 0.7
PKP3-201ENST00000331563 NUDT12Q9BQG2 462 aa19.44■□□□□ 0.7
PKP3-201ENST00000331563 FGFBP2Q9BYJ0 223 aa19.44■□□□□ 0.7
PKP3-201ENST00000331563 TAOK3Q9H2K8 898 aa19.44■□□□□ 0.7
PKP3-201ENST00000331563 SEPT11Q9NVA2 429 aaKnown RBP19.44■□□□□ 0.7
PKP3-201ENST00000331563 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.44■□□□□ 0.75e-6■■■■□ 22.9
PKP3-201ENST00000331563 HAO1Q9UJM8 370 aa19.44■□□□□ 0.7
PKP3-201ENST00000331563 ROBO3Q96MS0 1386 aa19.44■□□□□ 0.7
PKP3-201ENST00000331563 MARCH6O60337 910 aa19.43■□□□□ 0.7
PKP3-201ENST00000331563 PEX11AO75192 247 aa19.43■□□□□ 0.7
PKP3-201ENST00000331563 MAGEA10P43363 369 aaPredicted RBP19.43■□□□□ 0.7
PKP3-201ENST00000331563 GRM4Q14833 912 aa19.43■□□□□ 0.7
PKP3-201ENST00000331563 HERC4Q5GLZ8 1057 aaPredicted RBP19.43■□□□□ 0.7
PKP3-201ENST00000331563 DCAF12L1Q5VU92 463 aa19.43■□□□□ 0.7
PKP3-201ENST00000331563 CAMKK2Q96RR4 588 aa19.43■□□□□ 0.7
PKP3-201ENST00000331563 PARP2Q9UGN5 583 aa19.43■□□□□ 0.7
PKP3-201ENST00000331563 LTBP1Q14766 1721 aa19.43■□□□□ 0.7
PKP3-201ENST00000331563 ECE2O60344 883 aa19.43■□□□□ 0.7
PKP3-201ENST00000331563 OATP04181 439 aa19.43■□□□□ 0.7
PKP3-201ENST00000331563 CCDC6Q16204 474 aa19.43■□□□□ 0.7
PKP3-201ENST00000331563 AADACL2Q6P093 401 aa19.43■□□□□ 0.7
PKP3-201ENST00000331563 ZNF449Q6P9G9 518 aa19.43■□□□□ 0.7
PKP3-201ENST00000331563 NEDD1Q8NHV4 660 aa19.43■□□□□ 0.7
PKP3-201ENST00000331563 RBM46Q8TBY0 533 aaKnown RBP19.43■□□□□ 0.7
PKP3-201ENST00000331563 OPTNQ96CV9 577 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms