RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 PTPRHQ9HD43 1115 aa17.62■□□□□ 0.41
LRRC28-202ENST00000331450 SLC39A2Q9NP94 309 aa17.62■□□□□ 0.41
LRRC28-202ENST00000331450 TNFSF13BQ9Y275 285 aa17.62■□□□□ 0.41
LRRC28-202ENST00000331450 PCDHB13Q9Y5F0 798 aa17.62■□□□□ 0.41
LRRC28-202ENST00000331450 KIAA1671Q9BY89 1806 aa17.62■□□□□ 0.41
LRRC28-202ENST00000331450 UBE4BO95155 1302 aa17.62■□□□□ 0.41
LRRC28-202ENST00000331450 ANK1P16157 1881 aa17.62■□□□□ 0.41
LRRC28-202ENST00000331450 A0A0U1RQF3 1178 aa17.61■□□□□ 0.41
LRRC28-202ENST00000331450 N4BP3O15049 544 aa17.61■□□□□ 0.41
LRRC28-202ENST00000331450 SMC2O95347 1197 aa17.61■□□□□ 0.41
LRRC28-202ENST00000331450 ATF7P17544 494 aaPredicted RBP17.61■□□□□ 0.41
LRRC28-202ENST00000331450 HOXD13P35453 343 aa17.61■□□□□ 0.41
LRRC28-202ENST00000331450 NCBP1Q09161 790 aaKnown RBP17.61■□□□□ 0.41
LRRC28-202ENST00000331450 CAMK4Q16566 473 aa17.61■□□□□ 0.41
LRRC28-202ENST00000331450 BMT2Q1RMZ1 405 aa17.61■□□□□ 0.41
LRRC28-202ENST00000331450 ATF7IP2Q5U623 682 aa17.61■□□□□ 0.41
LRRC28-202ENST00000331450 TWF2Q6IBS0 349 aaKnown RBP17.61■□□□□ 0.41
LRRC28-202ENST00000331450 SLC39A4Q6P5W5 647 aa17.61■□□□□ 0.41
LRRC28-202ENST00000331450 SLC27A1Q6PCB7 646 aa17.61■□□□□ 0.41
LRRC28-202ENST00000331450 STXBP4Q6ZWJ1 553 aa17.61■□□□□ 0.41
LRRC28-202ENST00000331450 CDR2LQ86X02 465 aaPredicted RBP17.61■□□□□ 0.41
LRRC28-202ENST00000331450 TDHQ8IZJ6 230 aa17.61■□□□□ 0.41
LRRC28-202ENST00000331450 ZNF507Q8TCN5 953 aa17.61■□□□□ 0.41
LRRC28-202ENST00000331450 SCFD1Q8WVM8 642 aa17.61■□□□□ 0.41
LRRC28-202ENST00000331450 CCDC47Q96A33 483 aaKnown RBP17.61■□□□□ 0.41
LRRC28-202ENST00000331450 RNPC3Q96LT9 517 aaKnown RBP17.61■□□□□ 0.41
LRRC28-202ENST00000331450 NUP62CLQ9H1M0 184 aa17.61■□□□□ 0.41
LRRC28-202ENST00000331450 FAM105AQ9NUU6 356 aa17.61■□□□□ 0.41
LRRC28-202ENST00000331450 RMND1Q9NWS8 449 aa17.61■□□□□ 0.41
LRRC28-202ENST00000331450 CITO14578 2027 aa17.6■□□□□ 0.41
LRRC28-202ENST00000331450 ZBBXA8MT70 800 aa17.6■□□□□ 0.41
LRRC28-202ENST00000331450 ZNF623O75123 536 aa17.6■□□□□ 0.41
LRRC28-202ENST00000331450 PRPF6O94906 941 aaKnown RBP17.6■□□□□ 0.41
LRRC28-202ENST00000331450 KCNJ6P48051 423 aa17.6■□□□□ 0.41
LRRC28-202ENST00000331450 RAB27AP51159 221 aa17.6■□□□□ 0.41
LRRC28-202ENST00000331450 ZNF598Q86UK7 904 aaKnown RBP17.6■□□□□ 0.41
LRRC28-202ENST00000331450 ECHDC2Q86YB7 292 aa17.6■□□□□ 0.41
LRRC28-202ENST00000331450 ACCSQ96QU6 501 aa17.6■□□□□ 0.41
LRRC28-202ENST00000331450 SLC9A7Q96T83 725 aa17.6■□□□□ 0.41
LRRC28-202ENST00000331450 EIF2AQ9BY44 585 aaKnown RBP17.6■□□□□ 0.41
LRRC28-202ENST00000331450 IKZF4Q9H2S9 585 aa17.6■□□□□ 0.41
LRRC28-202ENST00000331450 ELAC1Q9H777 363 aaKnown RBP17.6■□□□□ 0.41
LRRC28-202ENST00000331450 MAN1B1Q9UKM7 699 aa17.6■□□□□ 0.41
LRRC28-202ENST00000331450 GDAQ9Y2T3 454 aa17.6■□□□□ 0.41
LRRC28-202ENST00000331450 SLC4A7Q9Y6M7 1214 aa17.6■□□□□ 0.41
LRRC28-202ENST00000331450 TDRD15B5MCY1 1934 aaKnown RBP17.6■□□□□ 0.41
LRRC28-202ENST00000331450 NLRC5Q86WI3 1866 aa17.59■□□□□ 0.41
LRRC28-202ENST00000331450 A0A1W2PPC1 479 aa17.59■□□□□ 0.41
LRRC28-202ENST00000331450 HNRNPDLO14979 420 aaKnown RBP17.59■□□□□ 0.41
LRRC28-202ENST00000331450 TOM1L1O75674 476 aa17.59■□□□□ 0.41
LRRC28-202ENST00000331450 AMHP03971 560 aa17.59■□□□□ 0.41
LRRC28-202ENST00000331450 PTMSP20962 102 aa17.59■□□□□ 0.41
LRRC28-202ENST00000331450 MPZL3Q6UWV2 235 aa17.59■□□□□ 0.41
LRRC28-202ENST00000331450 RBM43Q6ZSC3 357 aaKnown RBP17.59■□□□□ 0.41
LRRC28-202ENST00000331450 SMG8Q8ND04 991 aaKnown RBP17.59■□□□□ 0.41
LRRC28-202ENST00000331450 TOP1MTQ969P6 601 aa17.59■□□□□ 0.41
LRRC28-202ENST00000331450 HAPLN2Q9GZV7 340 aa17.59■□□□□ 0.41
LRRC28-202ENST00000331450 CDT1Q9H211 546 aa17.59■□□□□ 0.41
LRRC28-202ENST00000331450 TMEM161AQ9NX61 479 aa17.59■□□□□ 0.41
LRRC28-202ENST00000331450 KIAA1468Q9P260 1216 aa17.59■□□□□ 0.41
LRRC28-202ENST00000331450 TRIP11Q15643 1979 aa17.59■□□□□ 0.41
LRRC28-202ENST00000331450 TISP43B9A030 160 aa17.58■□□□□ 0.4
LRRC28-202ENST00000331450 ANKRD63C9JTQ0 380 aa17.58■□□□□ 0.4
LRRC28-202ENST00000331450 NPTXRO95502 500 aa17.58■□□□□ 0.4
LRRC28-202ENST00000331450 SKIP12755 728 aa17.58■□□□□ 0.4
LRRC28-202ENST00000331450 LIG4P49917 911 aa17.58■□□□□ 0.4
LRRC28-202ENST00000331450 MCL1Q07820 350 aa17.58■□□□□ 0.4
LRRC28-202ENST00000331450 DCAF4L1Q3SXM0 396 aa17.58■□□□□ 0.4
LRRC28-202ENST00000331450 ZNF568Q3ZCX4 644 aa17.58■□□□□ 0.4
LRRC28-202ENST00000331450 COBLL1Q53SF7 1204 aa17.58■□□□□ 0.4
LRRC28-202ENST00000331450 ZNF658Q5TYW1 1059 aaPredicted RBP17.58■□□□□ 0.4
LRRC28-202ENST00000331450 MRPL10Q7Z7H8 261 aaKnown RBP17.58■□□□□ 0.4
LRRC28-202ENST00000331450 NPAS4Q8IUM7 802 aa17.58■□□□□ 0.4
LRRC28-202ENST00000331450 MYOCDQ8IZQ8 938 aa17.58■□□□□ 0.4
LRRC28-202ENST00000331450 PHOSPHO2Q8TCD6 241 aa17.58■□□□□ 0.4
LRRC28-202ENST00000331450 BICD1Q96G01 975 aa17.58■□□□□ 0.4
LRRC28-202ENST00000331450 ZBTB45Q96K62 511 aaPredicted RBP17.58■□□□□ 0.4
LRRC28-202ENST00000331450 ADPGKQ9BRR6 497 aa17.58■□□□□ 0.4
LRRC28-202ENST00000331450 TMEM206Q9H813 350 aa17.58■□□□□ 0.4
LRRC28-202ENST00000331450 EXOC7Q9UPT5 735 aa17.58■□□□□ 0.4
LRRC28-202ENST00000331450 COLQQ9Y215 455 aaPredicted RBP17.58■□□□□ 0.4
LRRC28-202ENST00000331450 IPPQ9Y573 584 aa17.58■□□□□ 0.4
LRRC28-202ENST00000331450 PCDHB2Q9Y5E7 798 aa17.58■□□□□ 0.4
LRRC28-202ENST00000331450 STYXL1Q9Y6J8 313 aa17.58■□□□□ 0.4
LRRC28-202ENST00000331450 MCF2P10911 925 aa17.57■□□□□ 0.4
LRRC28-202ENST00000331450 ATP2A2P16615 1042 aaKnown RBP17.57■□□□□ 0.4
LRRC28-202ENST00000331450 BMP6P22004 513 aa17.57■□□□□ 0.4
LRRC28-202ENST00000331450 MORC3Q14149 939 aa17.57■□□□□ 0.4
LRRC28-202ENST00000331450 TMEM132AQ24JP5 1023 aa17.57■□□□□ 0.4
LRRC28-202ENST00000331450 KLHL40Q2TBA0 621 aa17.57■□□□□ 0.4
LRRC28-202ENST00000331450 TMCO2Q7Z6W1 182 aaPredicted RBP17.57■□□□□ 0.4
LRRC28-202ENST00000331450 GUF1Q8N442 669 aaKnown RBP17.57■□□□□ 0.4
LRRC28-202ENST00000331450 TRIML1Q8N9V2 468 aa17.57■□□□□ 0.4
LRRC28-202ENST00000331450 GTPBP4Q9BZE4 634 aaKnown RBP17.57■□□□□ 0.4
LRRC28-202ENST00000331450 NXF3Q9H4D5 531 aaKnown RBP17.57■□□□□ 0.4
LRRC28-202ENST00000331450 RC3H2Q9HBD1 1191 aaKnown RBP17.57■□□□□ 0.4
LRRC28-202ENST00000331450 RNF19AQ9NV58 838 aa17.57■□□□□ 0.4
LRRC28-202ENST00000331450 TMEM63CQ9P1W3 806 aa17.57■□□□□ 0.4
LRRC28-202ENST00000331450 A0A0B4J269 797 aa17.56■□□□□ 0.4
LRRC28-202ENST00000331450 MEIS3P2A8K0S8 358 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms