RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 CALCOCO2Q13137 446 aa26.08■■□□□ 1.77
SOX1-201ENST00000330949 TBC1D9BQ66K14 1250 aa26.08■■□□□ 1.77
SOX1-201ENST00000330949 ARHGAP18Q8N392 663 aa26.08■■□□□ 1.77
SOX1-201ENST00000330949 ALG3Q92685 438 aa26.08■■□□□ 1.77
SOX1-201ENST00000330949 GBP5Q96PP8 586 aa26.08■■□□□ 1.77
SOX1-201ENST00000330949 CRAMP1Q96RY5 1269 aa26.08■■□□□ 1.77
SOX1-201ENST00000330949 SPZ1Q9BXG8 430 aa26.08■■□□□ 1.77
SOX1-201ENST00000330949 NHSL1Q5SYE7 1610 aa26.08■■□□□ 1.77
SOX1-201ENST00000330949 LAMB1P07942 1786 aa26.07■■□□□ 1.76
SOX1-201ENST00000330949 POTEMA6NI47 508 aa26.07■■□□□ 1.76
SOX1-201ENST00000330949 ACSL3O95573 720 aa26.07■■□□□ 1.76
SOX1-201ENST00000330949 NR2F2P24468 414 aa26.07■■□□□ 1.76
SOX1-201ENST00000330949 CTNNA2P26232 953 aa26.07■■□□□ 1.76
SOX1-201ENST00000330949 UBE4AQ14139 1066 aa26.07■■□□□ 1.76
SOX1-201ENST00000330949 VCX3BQ9H321 246 aa26.07■■□□□ 1.76
SOX1-201ENST00000330949 VCX3AQ9NNX9 186 aa26.07■■□□□ 1.76
SOX1-201ENST00000330949 ARPP21Q9UBL0 812 aaPredicted RBP26.07■■□□□ 1.76
SOX1-201ENST00000330949 PASKQ96RG2 1323 aa26.07■■□□□ 1.76
SOX1-201ENST00000330949 GGPS1O95749 300 aa26.07■■□□□ 1.76
SOX1-201ENST00000330949 ALAS1P13196 640 aa26.07■■□□□ 1.76
SOX1-201ENST00000330949 MARK3P27448 753 aa26.07■■□□□ 1.76
SOX1-201ENST00000330949 LZTS2Q9BRK4 669 aa26.07■■□□□ 1.76
SOX1-201ENST00000330949 CRNKL1Q9BZJ0 848 aaKnown RBP26.07■■□□□ 1.76
SOX1-201ENST00000330949 ZNF652Q9Y2D9 606 aa26.07■■□□□ 1.76
SOX1-201ENST00000330949 ATP9AO75110 1047 aa26.06■■□□□ 1.76
SOX1-201ENST00000330949 SPDYAQ5MJ70 313 aa26.06■■□□□ 1.76
SOX1-201ENST00000330949 SLC30A5Q8TAD4 765 aa26.06■■□□□ 1.76
SOX1-201ENST00000330949 PTPRN2Q92932 1015 aa26.06■■□□□ 1.76
SOX1-201ENST00000330949 OPTNQ96CV9 577 aa26.06■■□□□ 1.76
SOX1-201ENST00000330949 FGFBP2Q9BYJ0 223 aa26.06■■□□□ 1.76
SOX1-201ENST00000330949 NT5C3AQ9H0P0 336 aa26.06■■□□□ 1.76
SOX1-201ENST00000330949 EMILIN3Q9NT22 766 aa26.06■■□□□ 1.76
SOX1-201ENST00000330949 STX8Q9UNK0 236 aa26.06■■□□□ 1.76
SOX1-201ENST00000330949 SNX30Q5VWJ9 437 aa26.06■■□□□ 1.76
SOX1-201ENST00000330949 FAM47EQ6ZV65 393 aa26.06■■□□□ 1.76
SOX1-201ENST00000330949 SCFD1Q8WVM8 642 aa26.06■■□□□ 1.76
SOX1-201ENST00000330949 CNKSR2Q8WXI2 1034 aa26.06■■□□□ 1.76
SOX1-201ENST00000330949 UBE2OQ9C0C9 1292 aaKnown RBP26.06■■□□□ 1.76
SOX1-201ENST00000330949 MIF4GDA9UHW6 222 aaKnown RBP26.06■■□□□ 1.76
SOX1-201ENST00000330949 TJP3O95049 919 aa26.06■■□□□ 1.76
SOX1-201ENST00000330949 XRCC5P13010 732 aaKnown RBP26.06■■□□□ 1.76
SOX1-201ENST00000330949 TTC27Q6P3X3 843 aa26.06■■□□□ 1.76
SOX1-201ENST00000330949 UBL4BQ8N7F7 174 aa26.06■■□□□ 1.76
SOX1-201ENST00000330949 LINC00116Q8NCU8 138 aa26.06■■□□□ 1.76
SOX1-201ENST00000330949 LNX1Q8TBB1 728 aaPredicted RBP26.06■■□□□ 1.76
SOX1-201ENST00000330949 NUDT12Q9BQG2 462 aa26.06■■□□□ 1.76
SOX1-201ENST00000330949 SPATA31A1Q5TZJ5 1347 aa26.05■■□□□ 1.76
SOX1-201ENST00000330949 ADGRA3Q8IWK6 1321 aa26.05■■□□□ 1.76
SOX1-201ENST00000330949 SETSIPP0DME0 302 aa26.05■■□□□ 1.76
SOX1-201ENST00000330949 HIBADHP31937 336 aaKnown RBP26.05■■□□□ 1.76
SOX1-201ENST00000330949 STAT1P42224 750 aa26.05■■□□□ 1.76
SOX1-201ENST00000330949 SESN3P58005 492 aa26.05■■□□□ 1.76
SOX1-201ENST00000330949 HHATQ5VTY9 493 aa26.05■■□□□ 1.76
SOX1-201ENST00000330949 CCDC105Q8IYK2 499 aa26.05■■□□□ 1.76
SOX1-201ENST00000330949 ZWILCHQ9H900 591 aa26.05■■□□□ 1.76
SOX1-201ENST00000330949 TMOD4Q9NZQ9 345 aa26.05■■□□□ 1.76
SOX1-201ENST00000330949 SAP30BPQ9UHR5 308 aaKnown RBP26.05■■□□□ 1.76
SOX1-201ENST00000330949 PCDHA2Q9Y5H9 948 aa26.05■■□□□ 1.76
SOX1-201ENST00000330949 COQ9O75208 318 aa26.05■■□□□ 1.76
SOX1-201ENST00000330949 ABCB4P21439 1286 aa26.05■■□□□ 1.76
SOX1-201ENST00000330949 GSTT1P30711 240 aa26.05■■□□□ 1.76
SOX1-201ENST00000330949 ZNF449Q6P9G9 518 aa26.05■■□□□ 1.76
SOX1-201ENST00000330949 ZC3H18Q86VM9 953 aaKnown RBP26.05■■□□□ 1.76
SOX1-201ENST00000330949 DZIP1Q86YF9 867 aaKnown RBP26.05■■□□□ 1.76
SOX1-201ENST00000330949 TLE6Q9H808 572 aa26.05■■□□□ 1.76
SOX1-201ENST00000330949 HNRNPCL1O60812 293 aaKnown RBP26.04■■□□□ 1.76
SOX1-201ENST00000330949 T-ENOLP0DO92 83 aa26.04■■□□□ 1.76
SOX1-201ENST00000330949 PTPN4P29074 926 aa26.04■■□□□ 1.76
SOX1-201ENST00000330949 NT5C2P49902 561 aa26.04■■□□□ 1.76
SOX1-201ENST00000330949 RBM12BQ8IXT5 1001 aaKnown RBP26.04■■□□□ 1.76
SOX1-201ENST00000330949 REXO1Q8N1G1 1221 aaKnown RBP26.04■■□□□ 1.76
SOX1-201ENST00000330949 SCG3Q8WXD2 468 aaKnown RBP26.04■■□□□ 1.76
SOX1-201ENST00000330949 SERPINB4P48594 390 aa26.04■■□□□ 1.76
SOX1-201ENST00000330949 EPHA7Q15375 998 aa26.04■■□□□ 1.76
SOX1-201ENST00000330949 SBK1Q52WX2 424 aa26.04■■□□□ 1.76
SOX1-201ENST00000330949 C7orf43Q8WVR3 580 aa26.04■■□□□ 1.76
SOX1-201ENST00000330949 NDNQ99608 321 aa26.04■■□□□ 1.76
SOX1-201ENST00000330949 IL17RBQ9NRM6 502 aa26.04■■□□□ 1.76
SOX1-201ENST00000330949 SMAPO00193 183 aa26.03■■□□□ 1.76
SOX1-201ENST00000330949 KPNB1Q14974 876 aaKnown RBP26.03■■□□□ 1.76
SOX1-201ENST00000330949 HERC4Q5GLZ8 1057 aaPredicted RBP26.03■■□□□ 1.76
SOX1-201ENST00000330949 GLYCTKQ8IVS8 523 aa26.03■■□□□ 1.76
SOX1-201ENST00000330949 ACTL7BQ9Y614 415 aa26.03■■□□□ 1.76
SOX1-201ENST00000330949 IGSF9BQ9UPX0 1349 aa26.03■■□□□ 1.76
SOX1-201ENST00000330949 TCEA3O75764 348 aa26.03■■□□□ 1.76
SOX1-201ENST00000330949 FOXN2P32314 431 aa26.03■■□□□ 1.76
SOX1-201ENST00000330949 RPS8P62241 208 aaKnown RBP26.03■■□□□ 1.76
SOX1-201ENST00000330949 FAM182BQ5T319 152 aa26.03■■□□□ 1.76
SOX1-201ENST00000330949 C4orf50Q6ZRC1 276 aa26.03■■□□□ 1.76
SOX1-201ENST00000330949 GATA6Q92908 595 aa26.03■■□□□ 1.76
SOX1-201ENST00000330949 MKNK2Q9HBH9 465 aa26.03■■□□□ 1.76
SOX1-201ENST00000330949 VAT1LQ9HCJ6 419 aa26.03■■□□□ 1.76
SOX1-201ENST00000330949 PALM3A6NDB9 673 aaPredicted RBP26.02■■□□□ 1.76
SOX1-201ENST00000330949 MAGEB2O15479 319 aa26.02■■□□□ 1.76
SOX1-201ENST00000330949 PPFIBP2Q8ND30 876 aa26.02■■□□□ 1.76
SOX1-201ENST00000330949 SIX2Q9NPC8 291 aa26.02■■□□□ 1.76
SOX1-201ENST00000330949 PHF24Q9UPV7 400 aa26.02■■□□□ 1.76
SOX1-201ENST00000330949 MOGSQ13724 837 aa26.02■■□□□ 1.76
SOX1-201ENST00000330949 SEL1L2Q5TEA6 688 aa26.02■■□□□ 1.76
SOX1-201ENST00000330949 AZIN2Q96A70 460 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms