RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 RBBP6Q7Z6E9 1792 aaKnown RBP18.71■□□□□ 0.59
PTP4A3-201ENST00000329397 NPR1P16066 1061 aa18.71■□□□□ 0.59
PTP4A3-201ENST00000329397 GKAP1Q5VSY0 366 aaPredicted RBP18.71■□□□□ 0.59
PTP4A3-201ENST00000329397 PADI6Q6TGC4 694 aa18.71■□□□□ 0.59
PTP4A3-201ENST00000329397 GLIS2Q9BZE0 524 aaPredicted RBP18.71■□□□□ 0.59
PTP4A3-201ENST00000329397 MLXIPLQ9NP71 852 aa18.71■□□□□ 0.59
PTP4A3-201ENST00000329397 PHF2O75151 1096 aa18.7■□□□□ 0.58
PTP4A3-201ENST00000329397 AOC3Q16853 763 aa18.7■□□□□ 0.58
PTP4A3-201ENST00000329397 C1orf220Q5T0J3 134 aa18.7■□□□□ 0.58
PTP4A3-201ENST00000329397 IL31RAQ8NI17 732 aa18.7■□□□□ 0.58
PTP4A3-201ENST00000329397 CCDC127Q96BQ5 260 aa18.7■□□□□ 0.58
PTP4A3-201ENST00000329397 SGSM3Q96HU1 749 aa18.7■□□□□ 0.58
PTP4A3-201ENST00000329397 ZSWIM1Q9BR11 485 aa18.7■□□□□ 0.58
PTP4A3-201ENST00000329397 KIFC3Q9BVG8 833 aa18.7■□□□□ 0.58
PTP4A3-201ENST00000329397 TMX4Q9H1E5 349 aaPredicted RBP18.7■□□□□ 0.58
PTP4A3-201ENST00000329397 SLX4Q8IY92 1834 aa18.7■□□□□ 0.58
PTP4A3-201ENST00000329397 PIK3CDO00329 1044 aa18.7■□□□□ 0.58
PTP4A3-201ENST00000329397 VAMP7P51809 220 aa18.7■□□□□ 0.58
PTP4A3-201ENST00000329397 SNX1Q13596 522 aa18.7■□□□□ 0.58
PTP4A3-201ENST00000329397 LRRC14Q15048 493 aa18.7■□□□□ 0.58
PTP4A3-201ENST00000329397 ERMARDQ5T6L9 678 aa18.7■□□□□ 0.58
PTP4A3-201ENST00000329397 DAB2IPQ5VWQ8 1189 aa18.7■□□□□ 0.58
PTP4A3-201ENST00000329397 PODNQ7Z5L7 613 aa18.7■□□□□ 0.58
PTP4A3-201ENST00000329397 CCDC105Q8IYK2 499 aa18.7■□□□□ 0.58
PTP4A3-201ENST00000329397 MGARPQ8TDB4 240 aa18.7■□□□□ 0.58
PTP4A3-201ENST00000329397 PRMT1Q99873 361 aaKnown RBP18.7■□□□□ 0.58
PTP4A3-201ENST00000329397 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.7■□□□□ 0.581e-8■■■■□ 21.9
PTP4A3-201ENST00000329397 RGS16O15492 202 aaPredicted RBP18.7■□□□□ 0.58
PTP4A3-201ENST00000329397 RASSF9O75901 435 aa18.7■□□□□ 0.58
PTP4A3-201ENST00000329397 SCTRP47872 440 aa18.7■□□□□ 0.58
PTP4A3-201ENST00000329397 PPP2R5AQ15172 486 aa18.7■□□□□ 0.58
PTP4A3-201ENST00000329397 EPC2Q52LR7 807 aa18.7■□□□□ 0.58
PTP4A3-201ENST00000329397 C2CD6Q53TS8 623 aa18.7■□□□□ 0.58
PTP4A3-201ENST00000329397 CHMP6Q96FZ7 201 aa18.7■□□□□ 0.58
PTP4A3-201ENST00000329397 CEP89Q96ST8 783 aa18.7■□□□□ 0.58
PTP4A3-201ENST00000329397 DDX23Q9BUQ8 820 aaKnown RBP18.7■□□□□ 0.58
PTP4A3-201ENST00000329397 FAM129AQ9BZQ8 928 aa18.7■□□□□ 0.58
PTP4A3-201ENST00000329397 SPOPO43791 374 aa18.69■□□□□ 0.58
PTP4A3-201ENST00000329397 PAEPP09466 180 aa18.69■□□□□ 0.58
PTP4A3-201ENST00000329397 DLATP10515 647 aaKnown RBP18.69■□□□□ 0.58
PTP4A3-201ENST00000329397 BCRP11274 1271 aa18.69■□□□□ 0.58
PTP4A3-201ENST00000329397 CHRNB2P17787 502 aa18.69■□□□□ 0.58
PTP4A3-201ENST00000329397 BTNL9Q6UXG8 535 aa18.69■□□□□ 0.58
PTP4A3-201ENST00000329397 HOOK3Q86VS8 718 aa18.69■□□□□ 0.58
PTP4A3-201ENST00000329397 DHX38Q92620 1227 aaKnown RBP18.69■□□□□ 0.58
PTP4A3-201ENST00000329397 SAAL1Q96ER3 474 aa18.69■□□□□ 0.58
PTP4A3-201ENST00000329397 WDR11Q9BZH6 1224 aa18.69■□□□□ 0.58
PTP4A3-201ENST00000329397 TOPORSQ9NS56 1045 aaPredicted RBP18.69■□□□□ 0.58
PTP4A3-201ENST00000329397 MMP10P09238 476 aa18.69■□□□□ 0.58
PTP4A3-201ENST00000329397 CREB1P16220 341 aa18.69■□□□□ 0.58
PTP4A3-201ENST00000329397 ITGB5P18084 799 aa18.69■□□□□ 0.58
PTP4A3-201ENST00000329397 SMTNP53814 917 aa18.69■□□□□ 0.58
PTP4A3-201ENST00000329397 TRIP13Q15645 432 aaPredicted RBP18.69■□□□□ 0.58
PTP4A3-201ENST00000329397 MEX3CQ5U5Q3 659 aaKnown RBP18.69■□□□□ 0.58
PTP4A3-201ENST00000329397 MIGA2Q7L4E1 593 aa18.69■□□□□ 0.58
PTP4A3-201ENST00000329397 LRRC34Q8IZ02 419 aa18.69■□□□□ 0.58
PTP4A3-201ENST00000329397 EPS8L1Q8TE68 723 aa18.69■□□□□ 0.58
PTP4A3-201ENST00000329397 C1orf54Q8WWF1 131 aa18.69■□□□□ 0.58
PTP4A3-201ENST00000329397 KREMEN1Q96MU8 473 aa18.69■□□□□ 0.58
PTP4A3-201ENST00000329397 NAP1L3Q99457 506 aaPredicted RBP18.69■□□□□ 0.58
PTP4A3-201ENST00000329397 TRIM7Q9C029 511 aa18.69■□□□□ 0.58
PTP4A3-201ENST00000329397 TRPC6Q9Y210 931 aa18.69■□□□□ 0.58
PTP4A3-201ENST00000329397 ZBTB12Q9Y330 459 aaPredicted RBP18.69■□□□□ 0.58
PTP4A3-201ENST00000329397 SYNGAP1Q96PV0 1343 aa18.68■□□□□ 0.58
PTP4A3-201ENST00000329397 ADRB2P07550 413 aa18.68■□□□□ 0.58
PTP4A3-201ENST00000329397 GPC5P78333 572 aa18.68■□□□□ 0.58
PTP4A3-201ENST00000329397 LLGL2Q6P1M3 1020 aa18.68■□□□□ 0.58
PTP4A3-201ENST00000329397 RHOT2Q8IXI1 618 aa18.68■□□□□ 0.58
PTP4A3-201ENST00000329397 UBL4BQ8N7F7 174 aa18.68■□□□□ 0.58
PTP4A3-201ENST00000329397 ATXN2LQ8WWM7 1075 aaKnown RBP18.68■□□□□ 0.58
PTP4A3-201ENST00000329397 HVCN1Q96D96 273 aa18.68■□□□□ 0.58
PTP4A3-201ENST00000329397 SCLT1Q96NL6 688 aa18.68■□□□□ 0.58
PTP4A3-201ENST00000329397 CD2APQ9Y5K6 639 aa18.68■□□□□ 0.58
PTP4A3-201ENST00000329397 STK24Q9Y6E0 443 aa18.68■□□□□ 0.58
PTP4A3-201ENST00000329397 ATP8B3O60423 1300 aa18.68■□□□□ 0.58
PTP4A3-201ENST00000329397 C5orf60A6NFR6 353 aa18.68■□□□□ 0.58
PTP4A3-201ENST00000329397 SLC16A4O15374 487 aa18.68■□□□□ 0.58
PTP4A3-201ENST00000329397 ACSL3O95573 720 aa18.68■□□□□ 0.58
PTP4A3-201ENST00000329397 RARAP10276 462 aa18.68■□□□□ 0.58
PTP4A3-201ENST00000329397 PEX5P50542 639 aa18.68■□□□□ 0.58
PTP4A3-201ENST00000329397 DHX34Q14147 1143 aaKnown RBP18.68■□□□□ 0.58
PTP4A3-201ENST00000329397 LONRF1Q17RB8 773 aa18.68■□□□□ 0.58
PTP4A3-201ENST00000329397 STRIP1Q5VSL9 837 aa18.68■□□□□ 0.58
PTP4A3-201ENST00000329397 STXBP4Q6ZWJ1 553 aa18.68■□□□□ 0.58
PTP4A3-201ENST00000329397 CBWD2Q8IUF1 395 aa18.68■□□□□ 0.58
PTP4A3-201ENST00000329397 SEMA4DQ92854 862 aa18.68■□□□□ 0.58
PTP4A3-201ENST00000329397 AGBL1Q96MI9 1066 aa18.68■□□□□ 0.58
PTP4A3-201ENST00000329397 FAM118BQ9BPY3 351 aa18.68■□□□□ 0.58
PTP4A3-201ENST00000329397 ELAC2Q9BQ52 826 aaKnown RBP18.68■□□□□ 0.58
PTP4A3-201ENST00000329397 NUP85Q9BW27 656 aa18.68■□□□□ 0.58
PTP4A3-201ENST00000329397 TEKT3Q9BXF9 490 aa18.68■□□□□ 0.58
PTP4A3-201ENST00000329397 HSPBP1Q9NZL4 362 aa18.68■□□□□ 0.58
PTP4A3-201ENST00000329397 COL20A1Q9P218 1284 aa18.68■□□□□ 0.58
PTP4A3-201ENST00000329397 SEL1LQ9UBV2 794 aa18.68■□□□□ 0.58
PTP4A3-201ENST00000329397 ODF2LQ9ULJ1 636 aa18.68■□□□□ 0.58
PTP4A3-201ENST00000329397 VIMP08670 466 aaKnown RBP18.67■□□□□ 0.58
PTP4A3-201ENST00000329397 EIF3BP55884 814 aaKnown RBP18.67■□□□□ 0.58
PTP4A3-201ENST00000329397 NFIL3Q16649 462 aa18.67■□□□□ 0.58
PTP4A3-201ENST00000329397 SEL1L2Q5TEA6 688 aa18.67■□□□□ 0.58
PTP4A3-201ENST00000329397 CYB5D1Q6P9G0 228 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms