RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 FAM110CQ1W6H9 321 aa16.21■□□□□ 0.18
TPM3-205ENST00000328159 C10orf76Q5T2E6 689 aa16.21■□□□□ 0.18
TPM3-205ENST00000328159 CST9Q5W186 159 aa16.21■□□□□ 0.18
TPM3-205ENST00000328159 PAPD7Q5XG87 772 aaKnown RBP16.21■□□□□ 0.18
TPM3-205ENST00000328159 CEP112Q8N8E3 955 aa16.21■□□□□ 0.18
TPM3-205ENST00000328159 TCP11Q8WWU5 503 aa16.21■□□□□ 0.18
TPM3-205ENST00000328159 PRPF31Q8WWY3 499 aaKnown RBP16.21■□□□□ 0.18
TPM3-205ENST00000328159 UBXN4Q92575 508 aa16.21■□□□□ 0.18
TPM3-205ENST00000328159 FAM213AQ9BRX8 229 aa16.21■□□□□ 0.18
TPM3-205ENST00000328159 KIAA1586Q9HCI6 787 aa16.21■□□□□ 0.18
TPM3-205ENST00000328159 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.21■□□□□ 0.18
TPM3-205ENST00000328159 CAPN6Q9Y6Q1 641 aa16.21■□□□□ 0.18
TPM3-205ENST00000328159 ZNF233A6NK53 670 aa16.2■□□□□ 0.18
TPM3-205ENST00000328159 KIAA0391O15091 583 aaKnown RBP16.2■□□□□ 0.18
TPM3-205ENST00000328159 ADCY3O60266 1144 aa16.2■□□□□ 0.18
TPM3-205ENST00000328159 EVI5O60447 810 aa16.2■□□□□ 0.18
TPM3-205ENST00000328159 GH1P01241 217 aa16.2■□□□□ 0.18
TPM3-205ENST00000328159 GTF2H1P32780 548 aa16.2■□□□□ 0.18
TPM3-205ENST00000328159 MAP2K1Q02750 393 aaPredicted RBP16.2■□□□□ 0.18
TPM3-205ENST00000328159 LAMC2Q13753 1193 aa16.2■□□□□ 0.18
TPM3-205ENST00000328159 GRB14Q14449 540 aa16.2■□□□□ 0.18
TPM3-205ENST00000328159 ARHGAP44Q17R89 818 aa16.2■□□□□ 0.18
TPM3-205ENST00000328159 KRT39Q6A163 491 aa16.2■□□□□ 0.18
TPM3-205ENST00000328159 TRAPPC11Q7Z392 1133 aa16.2■□□□□ 0.18
TPM3-205ENST00000328159 SRGAP1Q7Z6B7 1085 aa16.2■□□□□ 0.18
TPM3-205ENST00000328159 PLEKHH3Q7Z736 793 aa16.2■□□□□ 0.18
TPM3-205ENST00000328159 VPS36Q86VN1 386 aa16.2■□□□□ 0.18
TPM3-205ENST00000328159 ARHGEF19Q8IW93 802 aa16.2■□□□□ 0.18
TPM3-205ENST00000328159 RNF10Q8N5U6 811 aaKnown RBP16.2■□□□□ 0.18
TPM3-205ENST00000328159 VTI1AQ96AJ9 217 aa16.2■□□□□ 0.18
TPM3-205ENST00000328159 TMEM8AQ9HCN3 771 aa16.2■□□□□ 0.18
TPM3-205ENST00000328159 UBE2TQ9NPD8 197 aaPredicted RBP16.2■□□□□ 0.18
TPM3-205ENST00000328159 NMRK2Q9NPI5 230 aa16.2■□□□□ 0.18
TPM3-205ENST00000328159 HDAC6Q9UBN7 1215 aa16.2■□□□□ 0.18
TPM3-205ENST00000328159 NENFQ9UMX5 172 aa16.2■□□□□ 0.18
TPM3-205ENST00000328159 TRPC6Q9Y210 931 aa16.2■□□□□ 0.18
TPM3-205ENST00000328159 IGKV6-21A0A0C4DH24 114 aa16.19■□□□□ 0.18
TPM3-205ENST00000328159 CCDC172P0C7W6 258 aa16.19■□□□□ 0.18
TPM3-205ENST00000328159 HUNKP57058 714 aa16.19■□□□□ 0.18
TPM3-205ENST00000328159 MKRN4PQ13434 485 aaPredicted RBP16.19■□□□□ 0.18
TPM3-205ENST00000328159 NAB2Q15742 525 aa16.19■□□□□ 0.18
TPM3-205ENST00000328159 SLFN12LQ6IEE8 588 aa16.19■□□□□ 0.18
TPM3-205ENST00000328159 MAMDC4Q6UXC1 1216 aa16.19■□□□□ 0.18
TPM3-205ENST00000328159 DPP9Q86TI2 863 aa16.19■□□□□ 0.18
TPM3-205ENST00000328159 ALS2CR12Q96Q35 445 aa16.19■□□□□ 0.18
TPM3-205ENST00000328159 POP1Q99575 1024 aaKnown RBP16.19■□□□□ 0.18
TPM3-205ENST00000328159 KATNBL1Q9H079 304 aa16.19■□□□□ 0.18
TPM3-205ENST00000328159 SUGCTQ9HAC7 445 aa16.19■□□□□ 0.18
TPM3-205ENST00000328159 TOPORSQ9NS56 1045 aaPredicted RBP16.19■□□□□ 0.18
TPM3-205ENST00000328159 SALL4Q9UJQ4 1053 aa16.19■□□□□ 0.18
TPM3-205ENST00000328159 COQ4Q9Y3A0 265 aa16.19■□□□□ 0.18
TPM3-205ENST00000328159 TULP1O00294 542 aaPredicted RBP16.18■□□□□ 0.18
TPM3-205ENST00000328159 HBP1O60381 514 aa16.18■□□□□ 0.18
TPM3-205ENST00000328159 LRRN2O75325 713 aa16.18■□□□□ 0.18
TPM3-205ENST00000328159 ITGBL1O95965 494 aaPredicted RBP16.18■□□□□ 0.18
TPM3-205ENST00000328159 MAPK4P31152 587 aa16.18■□□□□ 0.18
TPM3-205ENST00000328159 MXD4Q14582 209 aaPredicted RBP16.18■□□□□ 0.18
TPM3-205ENST00000328159 BMS1Q14692 1282 aaKnown RBP16.18■□□□□ 0.18
TPM3-205ENST00000328159 KIAA0753Q2KHM9 967 aa16.18■□□□□ 0.18
TPM3-205ENST00000328159 GJC2Q5T442 439 aaPredicted RBP16.18■□□□□ 0.18
TPM3-205ENST00000328159 RSRC2Q7L4I2 434 aaKnown RBP16.18■□□□□ 0.18
TPM3-205ENST00000328159 PSPC1Q8WXF1 523 aaKnown RBP16.18■□□□□ 0.18
TPM3-205ENST00000328159 NOX5Q96PH1 765 aa16.18■□□□□ 0.18
TPM3-205ENST00000328159 JPH2Q9BR39 696 aaPredicted RBP16.18■□□□□ 0.18
TPM3-205ENST00000328159 TARS2Q9BW92 718 aaKnown RBP16.18■□□□□ 0.18
TPM3-205ENST00000328159 PACSIN1Q9BY11 444 aa16.18■□□□□ 0.18
TPM3-205ENST00000328159 NAGPAQ9UK23 515 aa16.18■□□□□ 0.18
TPM3-205ENST00000328159 AGO2Q9UKV8 859 aaKnown RBP16.18■□□□□ 0.18
TPM3-205ENST00000328159 SAR1BQ9Y6B6 198 aa16.18■□□□□ 0.18
TPM3-205ENST00000328159 FOXN3O00409 490 aaPredicted RBP16.18■□□□□ 0.18
TPM3-205ENST00000328159 SNAI1O95863 264 aaPredicted RBP16.18■□□□□ 0.18
TPM3-205ENST00000328159 EDN1P05305 212 aa16.18■□□□□ 0.18
TPM3-205ENST00000328159 EFNA5P52803 228 aa16.18■□□□□ 0.18
TPM3-205ENST00000328159 LAMTOR4Q0VGL1 99 aa16.18■□□□□ 0.18
TPM3-205ENST00000328159 HSP90AA2PQ14568 343 aaPredicted RBP16.18■□□□□ 0.18
TPM3-205ENST00000328159 KIF22Q14807 665 aa16.18■□□□□ 0.18
TPM3-205ENST00000328159 ALKBH5Q6P6C2 394 aaKnown RBP16.18■□□□□ 0.18
TPM3-205ENST00000328159 MTERF4Q7Z6M4 381 aaKnown RBP16.18■□□□□ 0.18
TPM3-205ENST00000328159 PDCL2Q8N4E4 241 aa16.18■□□□□ 0.18
TPM3-205ENST00000328159 LRRC71Q8N4P6 559 aa16.18■□□□□ 0.18
TPM3-205ENST00000328159 GOLGA1Q92805 767 aa16.18■□□□□ 0.18
TPM3-205ENST00000328159 SEMA4DQ92854 862 aa16.18■□□□□ 0.18
TPM3-205ENST00000328159 MAML3Q96JK9 1138 aa16.18■□□□□ 0.18
TPM3-205ENST00000328159 ZBTB45Q96K62 511 aaPredicted RBP16.18■□□□□ 0.18
TPM3-205ENST00000328159 HAPLN2Q9GZV7 340 aa16.18■□□□□ 0.18
TPM3-205ENST00000328159 ERAP1Q9NZ08 941 aa16.18■□□□□ 0.18
TPM3-205ENST00000328159 PUF60Q9UHX1 559 aaKnown RBP16.18■□□□□ 0.18
TPM3-205ENST00000328159 JRKLQ9Y4A0 524 aa16.18■□□□□ 0.18
TPM3-205ENST00000328159 DDX3XO00571 662 aaKnown RBP eCLIP16.17■□□□□ 0.18
TPM3-205ENST00000328159 TFRCP02786 760 aaKnown RBP16.17■□□□□ 0.18
TPM3-205ENST00000328159 LGALS2P05162 132 aa16.17■□□□□ 0.18
TPM3-205ENST00000328159 DLATP10515 647 aaKnown RBP16.17■□□□□ 0.18
TPM3-205ENST00000328159 KLRC1P26715 233 aa16.17■□□□□ 0.18
TPM3-205ENST00000328159 ADCYAP1R1P41586 468 aa16.17■□□□□ 0.18
TPM3-205ENST00000328159 GPC3P51654 580 aa16.17■□□□□ 0.18
TPM3-205ENST00000328159 NLRP11P59045 1033 aaKnown RBP16.17■□□□□ 0.18
TPM3-205ENST00000328159 CHMP4BP1P59074 171 aa16.17■□□□□ 0.18
TPM3-205ENST00000328159 PSMD6Q15008 389 aa16.17■□□□□ 0.18
TPM3-205ENST00000328159 TEX35Q5T0J7 233 aa16.17■□□□□ 0.18
TPM3-205ENST00000328159 CDCA2Q69YH5 1023 aaPredicted RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms