RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 TMEM120BA0PK00 339 aa15.69■□□□□ 0.1
SSBP3-201ENST00000326956 RTN2O75298 545 aa15.69■□□□□ 0.1
SSBP3-201ENST00000326956 PYGMP11217 842 aa15.69■□□□□ 0.1
SSBP3-201ENST00000326956 ZNF131P52739 623 aa15.69■□□□□ 0.1
SSBP3-201ENST00000326956 CERKLQ49MI3 558 aaPredicted RBP15.69■□□□□ 0.1
SSBP3-201ENST00000326956 EXOC3L1Q86VI1 746 aa15.69■□□□□ 0.1
SSBP3-201ENST00000326956 SLC13A5Q86YT5 568 aaPredicted RBP15.69■□□□□ 0.1
SSBP3-201ENST00000326956 P2RX7Q99572 595 aaKnown RBP15.69■□□□□ 0.1
SSBP3-201ENST00000326956 TUFT1Q9NNX1 390 aa15.69■□□□□ 0.1
SSBP3-201ENST00000326956 STK38LQ9Y2H1 464 aa15.69■□□□□ 0.1
SSBP3-201ENST00000326956 L3MBTL1Q9Y468 752 aa15.69■□□□□ 0.1
SSBP3-201ENST00000326956 BBOX1O75936 387 aa15.69■□□□□ 0.1
SSBP3-201ENST00000326956 ECM2O94769 699 aaPredicted RBP15.69■□□□□ 0.1
SSBP3-201ENST00000326956 ANP32DO95626 131 aa15.69■□□□□ 0.1
SSBP3-201ENST00000326956 UBAP2Q5T6F2 1119 aaKnown RBP15.69■□□□□ 0.1
SSBP3-201ENST00000326956 PRR5LQ6MZQ0 368 aa15.69■□□□□ 0.1
SSBP3-201ENST00000326956 MFSD5Q6N075 450 aa15.69■□□□□ 0.1
SSBP3-201ENST00000326956 C1orf186Q6ZWK4 172 aa15.69■□□□□ 0.1
SSBP3-201ENST00000326956 PTF1AQ7RTS3 328 aa15.69■□□□□ 0.1
SSBP3-201ENST00000326956 CRYGNQ8WXF5 182 aa15.69■□□□□ 0.1
SSBP3-201ENST00000326956 ART4Q93070 314 aa15.69■□□□□ 0.1
SSBP3-201ENST00000326956 MLXIPLQ9NP71 852 aa15.69■□□□□ 0.1
SSBP3-201ENST00000326956 BCS1LQ9Y276 419 aa15.69■□□□□ 0.1
SSBP3-201ENST00000326956 UBE4BO95155 1302 aa15.69■□□□□ 0.1
SSBP3-201ENST00000326956 COL16A1Q07092 1604 aaPredicted RBP15.68■□□□□ 0.1
SSBP3-201ENST00000326956 FAM196BA6NMK8 535 aa15.68■□□□□ 0.1
SSBP3-201ENST00000326956 IGF2BP3O00425 579 aaKnown RBP eCLIP15.68■□□□□ 0.1
SSBP3-201ENST00000326956 SLURP2P0DP57 97 aa15.68■□□□□ 0.1
SSBP3-201ENST00000326956 KCNJ2P63252 427 aa15.68■□□□□ 0.1
SSBP3-201ENST00000326956 LACTBP83111 547 aaPredicted RBP15.68■□□□□ 0.1
SSBP3-201ENST00000326956 LLGL1Q15334 1064 aa15.68■□□□□ 0.1
SSBP3-201ENST00000326956 ZKSCAN8Q15776 578 aaPredicted RBP15.68■□□□□ 0.1
SSBP3-201ENST00000326956 RNF207Q6ZRF8 634 aa15.68■□□□□ 0.1
SSBP3-201ENST00000326956 CDC42EP4Q9H3Q1 356 aaKnown RBP15.68■□□□□ 0.1
SSBP3-201ENST00000326956 AGAP1Q9UPQ3 857 aa15.68■□□□□ 0.1
SSBP3-201ENST00000326956 EMSYQ7Z589 1322 aa15.68■□□□□ 0.1
SSBP3-201ENST00000326956 CIITAP33076 1130 aa15.68■□□□□ 0.1
SSBP3-201ENST00000326956 RWDD2BP57060 319 aa15.68■□□□□ 0.1
SSBP3-201ENST00000326956 ICA1Q05084 483 aa15.68■□□□□ 0.1
SSBP3-201ENST00000326956 GDAP1Q8TB36 358 aa15.68■□□□□ 0.1
SSBP3-201ENST00000326956 SERPINB12Q96P63 405 aa15.68■□□□□ 0.1
SSBP3-201ENST00000326956 ARL2BPQ9Y2Y0 163 aa15.68■□□□□ 0.1
SSBP3-201ENST00000326956 HGSO14964 777 aaPredicted RBP15.67■□□□□ 0.1
SSBP3-201ENST00000326956 ATMINO43313 823 aaPredicted RBP15.67■□□□□ 0.1
SSBP3-201ENST00000326956 NEBLO76041 1014 aa15.67■□□□□ 0.1
SSBP3-201ENST00000326956 POLD1P28340 1107 aa15.67■□□□□ 0.1
SSBP3-201ENST00000326956 STX2P32856 288 aa15.67■□□□□ 0.1
SSBP3-201ENST00000326956 COPS2P61201 443 aa15.67■□□□□ 0.1
SSBP3-201ENST00000326956 NCALDP61601 193 aa15.67■□□□□ 0.1
SSBP3-201ENST00000326956 ZNF268Q14587 947 aaPredicted RBP15.67■□□□□ 0.1
SSBP3-201ENST00000326956 SGO2Q562F6 1265 aa15.67■□□□□ 0.1
SSBP3-201ENST00000326956 TLDC1Q6P9B6 456 aa15.67■□□□□ 0.1
SSBP3-201ENST00000326956 SPATA21Q7Z572 469 aa15.67■□□□□ 0.1
SSBP3-201ENST00000326956 AMIGO3Q86WK7 504 aa15.67■□□□□ 0.1
SSBP3-201ENST00000326956 KIRREL3Q8IZU9 778 aa15.67■□□□□ 0.1
SSBP3-201ENST00000326956 ZNF564Q8TBZ8 553 aaPredicted RBP15.67■□□□□ 0.1
SSBP3-201ENST00000326956 AGAP11Q8TF27 550 aa15.67■□□□□ 0.1
SSBP3-201ENST00000326956 NACC1Q96RE7 527 aa15.67■□□□□ 0.1
SSBP3-201ENST00000326956 PCIF1Q9H4Z3 704 aa15.67■□□□□ 0.1
SSBP3-201ENST00000326956 NYAP2Q9P242 653 aa15.67■□□□□ 0.1
SSBP3-201ENST00000326956 C15orf41Q9Y2V0 281 aa15.67■□□□□ 0.1
SSBP3-201ENST00000326956 SUGT1Q9Y2Z0 365 aa15.67■□□□□ 0.1
SSBP3-201ENST00000326956 ANKRD63C9JTQ0 380 aa15.67■□□□□ 0.1
SSBP3-201ENST00000326956 ZBTB39O15060 712 aa15.67■□□□□ 0.1
SSBP3-201ENST00000326956 GAS7O60861 476 aa15.67■□□□□ 0.1
SSBP3-201ENST00000326956 SLITRK3O94933 977 aa15.67■□□□□ 0.1
SSBP3-201ENST00000326956 RARAP10276 462 aa15.67■□□□□ 0.1
SSBP3-201ENST00000326956 MMP14P50281 582 aa15.67■□□□□ 0.1
SSBP3-201ENST00000326956 SLC8A3P57103 927 aa15.67■□□□□ 0.1
SSBP3-201ENST00000326956 ATP11AP98196 1134 aa15.67■□□□□ 0.1
SSBP3-201ENST00000326956 TCP10Q12799 353 aa15.67■□□□□ 0.1
SSBP3-201ENST00000326956 SYDE2Q5VT97 1194 aa15.67■□□□□ 0.1
SSBP3-201ENST00000326956 CDC42EP5Q6NZY7 148 aa15.67■□□□□ 0.1
SSBP3-201ENST00000326956 SLC30A10Q6XR72 485 aa15.67■□□□□ 0.1
SSBP3-201ENST00000326956 INTS8Q75QN2 995 aaKnown RBP15.67■□□□□ 0.1
SSBP3-201ENST00000326956 TEKT1Q969V4 418 aa15.67■□□□□ 0.1
SSBP3-201ENST00000326956 FAM212AQ96EL1 285 aa15.67■□□□□ 0.1
SSBP3-201ENST00000326956 HSD17B14Q9BPX1 270 aa15.67■□□□□ 0.1
SSBP3-201ENST00000326956 DDX23Q9BUQ8 820 aaKnown RBP15.67■□□□□ 0.1
SSBP3-201ENST00000326956 NUP85Q9BW27 656 aa15.67■□□□□ 0.1
SSBP3-201ENST00000326956 TRIM7Q9C029 511 aa15.67■□□□□ 0.1
SSBP3-201ENST00000326956 EBF2Q9HAK2 575 aa15.67■□□□□ 0.1
SSBP3-201ENST00000326956 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.67■□□□□ 0.19e-7■■■■■ 147.4
SSBP3-201ENST00000326956 DMAC2Q9NW81 257 aa15.67■□□□□ 0.1
SSBP3-201ENST00000326956 NKIRAS1Q9NYS0 192 aa15.67■□□□□ 0.1
SSBP3-201ENST00000326956 KLHL14Q9P2G3 628 aa15.67■□□□□ 0.1
SSBP3-201ENST00000326956 TNRC6CQ9HCJ0 1690 aaKnown RBP15.67■□□□□ 0.1
SSBP3-201ENST00000326956 TCRBV7S2A1N4TA0A589 114 aa15.67■□□□□ 0.1
SSBP3-201ENST00000326956 ARHGEF35A5YM69 484 aa15.67■□□□□ 0.1
SSBP3-201ENST00000326956 F5H6K3 240 aa15.67■□□□□ 0.1
SSBP3-201ENST00000326956 PEX5P50542 639 aa15.67■□□□□ 0.1
SSBP3-201ENST00000326956 ALDH5A1P51649 535 aaPredicted RBP15.67■□□□□ 0.1
SSBP3-201ENST00000326956 SNX1Q13596 522 aa15.67■□□□□ 0.1
SSBP3-201ENST00000326956 MIGA2Q7L4E1 593 aa15.67■□□□□ 0.1
SSBP3-201ENST00000326956 ZNF653Q96CK0 615 aa15.67■□□□□ 0.1
SSBP3-201ENST00000326956 TRIM6Q9C030 488 aaPredicted RBP15.67■□□□□ 0.1
SSBP3-201ENST00000326956 ZC3H12CQ9C0D7 883 aaKnown RBP15.67■□□□□ 0.1
SSBP3-201ENST00000326956 COL24A1Q17RW2 1714 aa15.66■□□□□ 0.1
SSBP3-201ENST00000326956 K7ENM7 598 aa15.66■□□□□ 0.1
SSBP3-201ENST00000326956 THAP12O43422 761 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms