RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 PAXIP1Q6ZW49 1069 aaPredicted RBP17.99■□□□□ 0.47
SSH1-201ENST00000326470 SLC13A5Q86YT5 568 aaPredicted RBP17.99■□□□□ 0.47
SSH1-201ENST00000326470 KIRREL3Q8IZU9 778 aa17.99■□□□□ 0.47
SSH1-201ENST00000326470 LMO3Q8TAP4 145 aa17.99■□□□□ 0.47
SSH1-201ENST00000326470 ARHGEF2Q92974 986 aaKnown RBP17.99■□□□□ 0.47
SSH1-201ENST00000326470 CD101Q93033 1021 aa17.99■□□□□ 0.47
SSH1-201ENST00000326470 SERPINB12Q96P63 405 aa17.99■□□□□ 0.47
SSH1-201ENST00000326470 FIZ1Q96SL8 496 aa17.99■□□□□ 0.47
SSH1-201ENST00000326470 GGT7Q9UJ14 662 aa17.99■□□□□ 0.47
SSH1-201ENST00000326470 TCRBV7S2A1N4TA0A589 114 aa17.98■□□□□ 0.47
SSH1-201ENST00000326470 TMEM120BA0PK00 339 aa17.98■□□□□ 0.47
SSH1-201ENST00000326470 O00370 1275 aa17.98■□□□□ 0.47
SSH1-201ENST00000326470 IGF2BP3O00425 579 aaKnown RBP eCLIP17.98■□□□□ 0.47
SSH1-201ENST00000326470 BCRP11274 1271 aa17.98■□□□□ 0.47
SSH1-201ENST00000326470 LONRF1Q17RB8 773 aa17.98■□□□□ 0.47
SSH1-201ENST00000326470 ZNF720Q7Z2F6 126 aa17.98■□□□□ 0.47
SSH1-201ENST00000326470 AMIGO3Q86WK7 504 aa17.98■□□□□ 0.47
SSH1-201ENST00000326470 KSR1Q8IVT5 923 aa17.98■□□□□ 0.47
SSH1-201ENST00000326470 DCAF4Q8WV16 495 aa17.98■□□□□ 0.47
SSH1-201ENST00000326470 FAM212AQ96EL1 285 aa17.98■□□□□ 0.47
SSH1-201ENST00000326470 HSD17B14Q9BPX1 270 aa17.98■□□□□ 0.47
SSH1-201ENST00000326470 PLCD4Q9BRC7 762 aa17.98■□□□□ 0.47
SSH1-201ENST00000326470 PTPN22Q9Y2R2 807 aa17.98■□□□□ 0.47
SSH1-201ENST00000326470 MTA2O94776 668 aa17.98■□□□□ 0.47
SSH1-201ENST00000326470 GJB6O95452 261 aa17.98■□□□□ 0.47
SSH1-201ENST00000326470 CCND1P24385 295 aa17.98■□□□□ 0.47
SSH1-201ENST00000326470 BFSP1Q12934 665 aa17.98■□□□□ 0.47
SSH1-201ENST00000326470 MESDQ14696 234 aa17.98■□□□□ 0.47
SSH1-201ENST00000326470 SIX1Q15475 284 aaPredicted RBP17.98■□□□□ 0.47
SSH1-201ENST00000326470 VSTM1Q6UX27 236 aa17.98■□□□□ 0.47
SSH1-201ENST00000326470 CCDC25Q86WR0 208 aa17.98■□□□□ 0.47
SSH1-201ENST00000326470 SEPT12Q8IYM1 358 aa17.98■□□□□ 0.47
SSH1-201ENST00000326470 CNBD1Q8NA66 436 aa17.98■□□□□ 0.47
SSH1-201ENST00000326470 MGARPQ8TDB4 240 aa17.98■□□□□ 0.47
SSH1-201ENST00000326470 KLHL29Q96CT2 875 aa17.98■□□□□ 0.47
SSH1-201ENST00000326470 AMNQ9BXJ7 453 aa17.98■□□□□ 0.47
SSH1-201ENST00000326470 TRIM6Q9C030 488 aaPredicted RBP17.98■□□□□ 0.47
SSH1-201ENST00000326470 CDC42EP4Q9H3Q1 356 aaKnown RBP17.98■□□□□ 0.47
SSH1-201ENST00000326470 SEL1LQ9UBV2 794 aa17.98■□□□□ 0.47
SSH1-201ENST00000326470 ARL2BPQ9Y2Y0 163 aa17.98■□□□□ 0.47
SSH1-201ENST00000326470 CCDC189A1A4V9 331 aa17.97■□□□□ 0.47
SSH1-201ENST00000326470 ECM2O94769 699 aaPredicted RBP17.97■□□□□ 0.47
SSH1-201ENST00000326470 CALCOCO2Q13137 446 aa17.97■□□□□ 0.47
SSH1-201ENST00000326470 C12orf50Q8NA57 414 aaPredicted RBP17.97■□□□□ 0.47
SSH1-201ENST00000326470 RPGRQ92834 1020 aaKnown RBP17.97■□□□□ 0.47
SSH1-201ENST00000326470 IFT74Q96LB3 600 aa17.97■□□□□ 0.47
SSH1-201ENST00000326470 DDX23Q9BUQ8 820 aaKnown RBP17.97■□□□□ 0.47
SSH1-201ENST00000326470 ARHGEF3Q9NR81 526 aa17.97■□□□□ 0.47
SSH1-201ENST00000326470 GREB1LQ9C091 1923 aaPredicted RBP17.97■□□□□ 0.47
SSH1-201ENST00000326470 RAD21O60216 631 aa17.97■□□□□ 0.47
SSH1-201ENST00000326470 ATP5DP30049 168 aa17.97■□□□□ 0.47
SSH1-201ENST00000326470 KCNJ1P48048 391 aa17.97■□□□□ 0.47
SSH1-201ENST00000326470 NUGGCQ68CJ6 796 aa17.97■□□□□ 0.47
SSH1-201ENST00000326470 STXBP4Q6ZWJ1 553 aa17.97■□□□□ 0.47
SSH1-201ENST00000326470 CYP2W1Q8TAV3 490 aa17.97■□□□□ 0.47
SSH1-201ENST00000326470 MKL1Q969V6 931 aa17.97■□□□□ 0.47
SSH1-201ENST00000326470 VTI1AQ96AJ9 217 aa17.97■□□□□ 0.47
SSH1-201ENST00000326470 CCDC17Q96LX7 622 aa17.97■□□□□ 0.47
SSH1-201ENST00000326470 TUFT1Q9NNX1 390 aa17.97■□□□□ 0.47
SSH1-201ENST00000326470 UBE2TQ9NPD8 197 aaPredicted RBP17.97■□□□□ 0.47
SSH1-201ENST00000326470 ECEL1O95672 775 aa17.96■□□□□ 0.47
SSH1-201ENST00000326470 CREB1P16220 341 aa17.96■□□□□ 0.47
SSH1-201ENST00000326470 GTF2IP78347 998 aa17.96■□□□□ 0.47
SSH1-201ENST00000326470 MAP2K1Q02750 393 aaPredicted RBP17.96■□□□□ 0.47
SSH1-201ENST00000326470 RRP1BQ14684 758 aaKnown RBP17.96■□□□□ 0.47
SSH1-201ENST00000326470 SLFN13Q68D06 897 aa17.96■□□□□ 0.47
SSH1-201ENST00000326470 MIGA2Q7L4E1 593 aa17.96■□□□□ 0.47
SSH1-201ENST00000326470 OTUD6AQ7L8S5 288 aa17.96■□□□□ 0.47
SSH1-201ENST00000326470 SPATA21Q7Z572 469 aa17.96■□□□□ 0.47
SSH1-201ENST00000326470 FAM178BQ8IXR5 827 aa17.96■□□□□ 0.47
SSH1-201ENST00000326470 RPUSD2Q8IZ73 545 aaKnown RBP17.96■□□□□ 0.47
SSH1-201ENST00000326470 CKAP2Q8WWK9 683 aa17.96■□□□□ 0.47
SSH1-201ENST00000326470 LRRC19Q9H756 370 aa17.96■□□□□ 0.47
SSH1-201ENST00000326470 RXFP1Q9HBX9 757 aa17.96■□□□□ 0.47
SSH1-201ENST00000326470 AAASQ9NRG9 546 aa17.96■□□□□ 0.47
SSH1-201ENST00000326470 WHRNQ9P202 907 aa17.96■□□□□ 0.47
SSH1-201ENST00000326470 PRKAG3Q9UGI9 489 aa17.96■□□□□ 0.47
SSH1-201ENST00000326470 POLLQ9UGP5 575 aa17.96■□□□□ 0.47
SSH1-201ENST00000326470 TULP1O00294 542 aaPredicted RBP17.96■□□□□ 0.46
SSH1-201ENST00000326470 TP73O15350 636 aa17.96■□□□□ 0.46
SSH1-201ENST00000326470 SLITRK3O94933 977 aa17.96■□□□□ 0.46
SSH1-201ENST00000326470 HLA-DOAP06340 250 aa17.96■□□□□ 0.46
SSH1-201ENST00000326470 KRT16P08779 473 aa17.96■□□□□ 0.46
SSH1-201ENST00000326470 SLC9A9Q8IVB4 645 aa17.96■□□□□ 0.46
SSH1-201ENST00000326470 DNAJC18Q9H819 358 aa17.96■□□□□ 0.46
SSH1-201ENST00000326470 EXOC3O60645 756 aa17.95■□□□□ 0.46
SSH1-201ENST00000326470 NEBLO76041 1014 aa17.95■□□□□ 0.46
SSH1-201ENST00000326470 ACSL3O95573 720 aa17.95■□□□□ 0.46
SSH1-201ENST00000326470 ASRGL1Q7L266 308 aa17.95■□□□□ 0.46
SSH1-201ENST00000326470 TPH2Q8IWU9 490 aa17.95■□□□□ 0.46
SSH1-201ENST00000326470 FITM2Q8N6M3 262 aa17.95■□□□□ 0.46
SSH1-201ENST00000326470 SLCO2A1Q92959 643 aa17.95■□□□□ 0.46
SSH1-201ENST00000326470 CHORDC1Q9UHD1 332 aaPredicted RBP17.95■□□□□ 0.46
SSH1-201ENST00000326470 CLGNO14967 610 aa17.94■□□□□ 0.46
SSH1-201ENST00000326470 CYP3A4P08684 503 aa17.94■□□□□ 0.46
SSH1-201ENST00000326470 EEF2P13639 858 aaKnown RBP17.94■□□□□ 0.46
SSH1-201ENST00000326470 ZNF76P36508 570 aa17.94■□□□□ 0.46
SSH1-201ENST00000326470 BZW1Q7L1Q6 419 aaKnown RBP17.94■□□□□ 0.46
SSH1-201ENST00000326470 FBXO11Q86XK2 927 aa17.94■□□□□ 0.46
SSH1-201ENST00000326470 KIF2BQ8N4N8 673 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms