RNA–Protein interactions for RNA: ENST00000321358.11

YBX1-201, Transcript of Y-box binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YBX1, Length 1,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-201ENST00000321358 PPP1R3GB7ZBB8 358 aa23.16■■□□□ 1.3
YBX1-201ENST00000321358 PDXKO00764 312 aa23.16■■□□□ 1.3
YBX1-201ENST00000321358 CLDN3O15551 220 aa23.16■■□□□ 1.3
YBX1-201ENST00000321358 CALUO43852 315 aaPredicted RBP23.16■■□□□ 1.3
YBX1-201ENST00000321358 CSF2RAP15509 400 aa23.16■■□□□ 1.3
YBX1-201ENST00000321358 SYN1P17600 705 aa23.16■■□□□ 1.3
YBX1-201ENST00000321358 FPGSQ05932 587 aa23.16■■□□□ 1.3
YBX1-201ENST00000321358 PPIGQ13427 754 aaKnown RBP eCLIP23.16■■□□□ 1.3
YBX1-201ENST00000321358 PLEKHG4Q58EX7 1191 aa23.16■■□□□ 1.3
YBX1-201ENST00000321358 TWF2Q6IBS0 349 aaKnown RBP23.16■■□□□ 1.3
YBX1-201ENST00000321358 DBF4BQ8NFT6 615 aa23.16■■□□□ 1.3
YBX1-201ENST00000321358 CPB2Q96IY4 423 aa23.16■■□□□ 1.3
YBX1-201ENST00000321358 ANKFY1Q9P2R3 1169 aa23.16■■□□□ 1.3
YBX1-201ENST00000321358 HOXA11P31270 313 aaPredicted RBP23.15■■□□□ 1.3
YBX1-201ENST00000321358 HOXD13P35453 343 aa23.15■■□□□ 1.3
YBX1-201ENST00000321358 PAK1Q13153 545 aa23.15■■□□□ 1.3
YBX1-201ENST00000321358 NELFBQ8WX92 580 aa23.15■■□□□ 1.3
YBX1-201ENST00000321358 POMGNT1Q8WZA1 660 aa23.15■■□□□ 1.3
YBX1-201ENST00000321358 BADQ92934 168 aa23.15■■□□□ 1.3
YBX1-201ENST00000321358 P2RX5Q93086 422 aa23.15■■□□□ 1.3
YBX1-201ENST00000321358 TRIM6Q9C030 488 aaPredicted RBP23.15■■□□□ 1.3
YBX1-201ENST00000321358 USP20Q9Y2K6 914 aa23.15■■□□□ 1.3
YBX1-201ENST00000321358 CD44P16070 742 aaKnown RBP23.14■■□□□ 1.3
YBX1-201ENST00000321358 CCNE1P24864 410 aa23.14■■□□□ 1.3
YBX1-201ENST00000321358 HSP90AA2PQ14568 343 aaPredicted RBP23.14■■□□□ 1.3
YBX1-201ENST00000321358 GPNMBQ14956 572 aa23.14■■□□□ 1.3
YBX1-201ENST00000321358 ZNF568Q3ZCX4 644 aa23.14■■□□□ 1.3
YBX1-201ENST00000321358 CENPPQ6IPU0 288 aa23.14■■□□□ 1.3
YBX1-201ENST00000321358 ARMCX5Q6P1M9 558 aa23.14■■□□□ 1.3
YBX1-201ENST00000321358 SLC27A1Q6PCB7 646 aa23.14■■□□□ 1.3
YBX1-201ENST00000321358 MPZL3Q6UWV2 235 aa23.14■■□□□ 1.3
YBX1-201ENST00000321358 OSBPL7Q9BZF2 842 aa23.14■■□□□ 1.3
YBX1-201ENST00000321358 KCTD10Q9H3F6 313 aa23.14■■□□□ 1.3
YBX1-201ENST00000321358 CTNND2Q9UQB3 1225 aa23.14■■□□□ 1.3
YBX1-201ENST00000321358 MYH11P35749 1972 aa23.14■■□□□ 1.29
YBX1-201ENST00000321358 ACTN1P12814 892 aa23.13■■□□□ 1.29
YBX1-201ENST00000321358 RPL13P26373 211 aaKnown RBP23.13■■□□□ 1.29
YBX1-201ENST00000321358 ERCC5P28715 1186 aaPredicted RBP23.13■■□□□ 1.29
YBX1-201ENST00000321358 LRRC63Q05C16 580 aa23.13■■□□□ 1.29
YBX1-201ENST00000321358 IKBKEQ14164 716 aa23.13■■□□□ 1.29
YBX1-201ENST00000321358 CNKSR3Q6P9H4 555 aa23.13■■□□□ 1.29
YBX1-201ENST00000321358 ADAM2Q99965 735 aa23.13■■□□□ 1.29
YBX1-201ENST00000321358 PDZD7Q9H5P4 517 aa23.13■■□□□ 1.29
YBX1-201ENST00000321358 IL23AQ9NPF7 189 aa23.13■■□□□ 1.29
YBX1-201ENST00000321358 AGPAT3Q9NRZ7 376 aa23.13■■□□□ 1.29
YBX1-201ENST00000321358 TTLL13PA6NNM8 815 aa23.13■■□□□ 1.29
YBX1-201ENST00000321358 ANKRD63C9JTQ0 380 aa23.13■■□□□ 1.29
YBX1-201ENST00000321358 CAVIN2O95810 425 aa23.13■■□□□ 1.29
YBX1-201ENST00000321358 EDN1P05305 212 aa23.13■■□□□ 1.29
YBX1-201ENST00000321358 SKIP12755 728 aa23.13■■□□□ 1.29
YBX1-201ENST00000321358 GARTP22102 1010 aa23.13■■□□□ 1.29
YBX1-201ENST00000321358 DCAF4L1Q3SXM0 396 aa23.13■■□□□ 1.29
YBX1-201ENST00000321358 DNAJC25Q9H1X3 360 aa23.13■■□□□ 1.29
YBX1-201ENST00000321358 SEMA6BQ9H3T3 888 aa23.13■■□□□ 1.29
YBX1-201ENST00000321358 RWDD2AQ9UIY3 292 aa23.13■■□□□ 1.29
YBX1-201ENST00000321358 TRAF3IP3Q9Y228 551 aa23.13■■□□□ 1.29
YBX1-201ENST00000321358 KIAA0391O15091 583 aaKnown RBP23.12■■□□□ 1.29
YBX1-201ENST00000321358 TGFB1I1O43294 461 aa23.12■■□□□ 1.29
YBX1-201ENST00000321358 NOLC1Q14978 699 aaKnown RBP eCLIP23.12■■□□□ 1.29
YBX1-201ENST00000321358 TPD52L1Q16890 204 aaPredicted RBP23.12■■□□□ 1.29
YBX1-201ENST00000321358 EDRF1Q3B7T1 1238 aa23.12■■□□□ 1.29
YBX1-201ENST00000321358 ANO6Q4KMQ2 910 aa23.12■■□□□ 1.29
YBX1-201ENST00000321358 PRPF38BQ5VTL8 546 aaKnown RBP23.12■■□□□ 1.29
YBX1-201ENST00000321358 ZBTB33Q86T24 672 aa23.12■■□□□ 1.29
YBX1-201ENST00000321358 CDR2LQ86X02 465 aaPredicted RBP23.12■■□□□ 1.29
YBX1-201ENST00000321358 HACE1Q8IYU2 909 aa23.12■■□□□ 1.29
YBX1-201ENST00000321358 MSTO1Q9BUK6 570 aa23.12■■□□□ 1.29
YBX1-201ENST00000321358 TMX1Q9H3N1 280 aa23.12■■□□□ 1.29
YBX1-201ENST00000321358 STYXL1Q9Y6J8 313 aa23.12■■□□□ 1.29
YBX1-201ENST00000321358 ZMYM2Q9UBW7 1377 aa23.11■■□□□ 1.29
YBX1-201ENST00000321358 EFCAB14O75071 495 aa23.11■■□□□ 1.29
YBX1-201ENST00000321358 MCF2P10911 925 aa23.11■■□□□ 1.29
YBX1-201ENST00000321358 HARSP12081 509 aaKnown RBP23.11■■□□□ 1.29
YBX1-201ENST00000321358 MCL1Q07820 350 aa23.11■■□□□ 1.29
YBX1-201ENST00000321358 KYAT1Q16773 422 aa23.11■■□□□ 1.29
YBX1-201ENST00000321358 LRSAM1Q6UWE0 723 aa23.11■■□□□ 1.29
YBX1-201ENST00000321358 ZBTB45Q96K62 511 aaPredicted RBP23.11■■□□□ 1.29
YBX1-201ENST00000321358 FUCA2Q9BTY2 467 aa23.11■■□□□ 1.29
YBX1-201ENST00000321358 IKZF4Q9H2S9 585 aa23.11■■□□□ 1.29
YBX1-201ENST00000321358 PTPRHQ9HD43 1115 aa23.11■■□□□ 1.29
YBX1-201ENST00000321358 C1orf112Q9NSG2 853 aa23.11■■□□□ 1.29
YBX1-201ENST00000321358 RNF216Q9NWF9 866 aaPredicted RBP23.11■■□□□ 1.29
YBX1-201ENST00000321358 AGO2Q9UKV8 859 aaKnown RBP23.11■■□□□ 1.29
YBX1-201ENST00000321358 A0A0B4J269 797 aa23.1■■□□□ 1.29
YBX1-201ENST00000321358 CLIC2O15247 247 aa23.1■■□□□ 1.29
YBX1-201ENST00000321358 NPTXRO95502 500 aa23.1■■□□□ 1.29
YBX1-201ENST00000321358 FGFR1OPO95684 399 aaKnown RBP23.1■■□□□ 1.29
YBX1-201ENST00000321358 LDHAP00338 332 aaKnown RBP23.1■■□□□ 1.29
YBX1-201ENST00000321358 PROZP22891 400 aa23.1■■□□□ 1.29
YBX1-201ENST00000321358 RAB27AP51159 221 aa23.1■■□□□ 1.29
YBX1-201ENST00000321358 STX17P56962 302 aa23.1■■□□□ 1.29
YBX1-201ENST00000321358 FKBP3Q00688 224 aaKnown RBP23.1■■□□□ 1.29
YBX1-201ENST00000321358 MYBPC2Q14324 1141 aa23.1■■□□□ 1.29
YBX1-201ENST00000321358 DSC3Q14574 896 aa23.1■■□□□ 1.29
YBX1-201ENST00000321358 EEF1DP3Q658K8 133 aa23.1■■□□□ 1.29
YBX1-201ENST00000321358 ANKRD40Q6AI12 368 aa23.1■■□□□ 1.29
YBX1-201ENST00000321358 SLC39A4Q6P5W5 647 aa23.1■■□□□ 1.29
YBX1-201ENST00000321358 FOXR2Q6PJQ5 311 aa23.1■■□□□ 1.29
YBX1-201ENST00000321358 SLC24A5Q71RS6 500 aa23.1■■□□□ 1.29
YBX1-201ENST00000321358 TSPYL2Q9H2G4 693 aaPredicted RBP23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms