RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 CCDC134Q9H6E4 229 aa9.38□□□□□ -0.91
CLK1-201ENST00000321356 TDRD3Q9H7E2 651 aaKnown RBP9.38□□□□□ -0.91
CLK1-201ENST00000321356 TMEM206Q9H813 350 aa9.38□□□□□ -0.91
CLK1-201ENST00000321356 SEPT11Q9NVA2 429 aaKnown RBP9.38□□□□□ -0.91
CLK1-201ENST00000321356 CTTNBP2NLQ9P2B4 639 aa9.38□□□□□ -0.91
CLK1-201ENST00000321356 PARP2Q9UGN5 583 aa9.38□□□□□ -0.91
CLK1-201ENST00000321356 PNMA2Q9UL42 364 aa9.38□□□□□ -0.91
CLK1-201ENST00000321356 SNX24Q9Y343 169 aa9.38□□□□□ -0.91
CLK1-201ENST00000321356 PHF20L1A8MW92 1017 aa9.38□□□□□ -0.91
CLK1-201ENST00000321356 BACH1O14867 736 aa9.38□□□□□ -0.91
CLK1-201ENST00000321356 AGTP01019 485 aa9.38□□□□□ -0.91
CLK1-201ENST00000321356 UBXN2AP68543 259 aa9.38□□□□□ -0.91
CLK1-201ENST00000321356 SIX1Q15475 284 aaPredicted RBP9.38□□□□□ -0.91
CLK1-201ENST00000321356 ZNF568Q3ZCX4 644 aa9.38□□□□□ -0.91
CLK1-201ENST00000321356 PADI6Q6TGC4 694 aa9.38□□□□□ -0.91
CLK1-201ENST00000321356 TAX1BP1Q86VP1 789 aa9.38□□□□□ -0.91
CLK1-201ENST00000321356 COL23A1Q86Y22 540 aaPredicted RBP9.38□□□□□ -0.91
CLK1-201ENST00000321356 FAM71AQ8IYT1 594 aa9.38□□□□□ -0.91
CLK1-201ENST00000321356 RPUSD2Q8IZ73 545 aaKnown RBP9.38□□□□□ -0.91
CLK1-201ENST00000321356 C12orf50Q8NA57 414 aaPredicted RBP9.38□□□□□ -0.91
CLK1-201ENST00000321356 ACER1Q8TDN7 264 aa9.38□□□□□ -0.91
CLK1-201ENST00000321356 CCT6BQ92526 530 aa9.38□□□□□ -0.91
CLK1-201ENST00000321356 CSRNP1Q96S65 589 aa9.38□□□□□ -0.91
CLK1-201ENST00000321356 PCDHB18PQ96TA0 734 aa9.38□□□□□ -0.91
CLK1-201ENST00000321356 WNT8AQ9H1J5 351 aa9.38□□□□□ -0.91
CLK1-201ENST00000321356 ST6GALNAC4Q9H4F1 302 aa9.38□□□□□ -0.91
CLK1-201ENST00000321356 ARHGEF10LQ9HCE6 1279 aa9.38□□□□□ -0.91
CLK1-201ENST00000321356 SLC40A1Q9NP59 571 aa9.38□□□□□ -0.91
CLK1-201ENST00000321356 HERC5Q9UII4 1024 aaKnown RBP9.38□□□□□ -0.91
CLK1-201ENST00000321356 DBR1Q9UK59 544 aaKnown RBP9.38□□□□□ -0.91
CLK1-201ENST00000321356 MRPL11Q9Y3B7 192 aaKnown RBP9.38□□□□□ -0.91
CLK1-201ENST00000321356 ZNF536O15090 1300 aa9.38□□□□□ -0.91
CLK1-201ENST00000321356 RGPD3A6NKT7 1758 aaPredicted RBP9.37□□□□□ -0.91
CLK1-201ENST00000321356 RGPD4Q7Z3J3 1758 aa9.37□□□□□ -0.91
CLK1-201ENST00000321356 TISP43B9A030 160 aa9.37□□□□□ -0.91
CLK1-201ENST00000321356 K7ENM7 598 aa9.37□□□□□ -0.91
CLK1-201ENST00000321356 TULP1O00294 542 aaPredicted RBP9.37□□□□□ -0.91
CLK1-201ENST00000321356 CYP1A2P05177 515 aa9.37□□□□□ -0.91
CLK1-201ENST00000321356 GHRP10912 638 aa9.37□□□□□ -0.91
CLK1-201ENST00000321356 CHN1P15882 459 aa9.37□□□□□ -0.91
CLK1-201ENST00000321356 COMTP21964 271 aa9.37□□□□□ -0.91
CLK1-201ENST00000321356 MNAT1P51948 309 aa9.37□□□□□ -0.91
CLK1-201ENST00000321356 CETN1Q12798 172 aa9.37□□□□□ -0.91
CLK1-201ENST00000321356 SLC29A2Q14542 456 aa9.37□□□□□ -0.91
CLK1-201ENST00000321356 C6orf118Q5T5N4 469 aa9.37□□□□□ -0.91
CLK1-201ENST00000321356 CC2D2BQ6DHV5 1058 aa9.37□□□□□ -0.91
CLK1-201ENST00000321356 CPLX4Q7Z7G2 160 aa9.37□□□□□ -0.91
CLK1-201ENST00000321356 NOP9Q86U38 636 aaKnown RBP9.37□□□□□ -0.91
CLK1-201ENST00000321356 RDH13Q8NBN7 331 aa9.37□□□□□ -0.91
CLK1-201ENST00000321356 PLEKHO2Q8TD55 490 aa9.37□□□□□ -0.91
CLK1-201ENST00000321356 CHURC1Q8WUH1 139 aa9.37□□□□□ -0.91
CLK1-201ENST00000321356 ART4Q93070 314 aa9.37□□□□□ -0.91
CLK1-201ENST00000321356 RUNDC3BQ96NL0 473 aa9.37□□□□□ -0.91
CLK1-201ENST00000321356 ACCSQ96QU6 501 aa9.37□□□□□ -0.91
CLK1-201ENST00000321356 MXRA8Q9BRK3 442 aa9.37□□□□□ -0.91
CLK1-201ENST00000321356 CBWD1Q9BRT8 395 aa9.37□□□□□ -0.91
CLK1-201ENST00000321356 KDM4CQ9H3R0 1056 aa9.37□□□□□ -0.91
CLK1-201ENST00000321356 SEMA4AQ9H3S1 761 aa9.37□□□□□ -0.91
CLK1-201ENST00000321356 GOPCQ9HD26 462 aa9.37□□□□□ -0.91
CLK1-201ENST00000321356 KLC4Q9NSK0 619 aa9.37□□□□□ -0.91
CLK1-201ENST00000321356 LARSQ9P2J5 1176 aaKnown RBP9.37□□□□□ -0.91
CLK1-201ENST00000321356 MTRF1LQ9UGC7 380 aaKnown RBP9.37□□□□□ -0.91
CLK1-201ENST00000321356 TRPC6Q9Y210 931 aa9.37□□□□□ -0.91
CLK1-201ENST00000321356 PSME4Q14997 1843 aa9.37□□□□□ -0.91
CLK1-201ENST00000321356 GOLGA6L7A0A1B0GV03 622 aa9.36□□□□□ -0.91
CLK1-201ENST00000321356 ASAP2O43150 1006 aa9.36□□□□□ -0.91
CLK1-201ENST00000321356 RIPK2O43353 540 aa9.36□□□□□ -0.91
CLK1-201ENST00000321356 CTNND1O60716 968 aaKnown RBP9.36□□□□□ -0.91
CLK1-201ENST00000321356 SGPL1O95470 568 aa9.36□□□□□ -0.91
CLK1-201ENST00000321356 MMEP08473 750 aa9.36□□□□□ -0.91
CLK1-201ENST00000321356 PYGMP11217 842 aa9.36□□□□□ -0.91
CLK1-201ENST00000321356 RARGP13631 454 aa9.36□□□□□ -0.91
CLK1-201ENST00000321356 ITGB5P18084 799 aa9.36□□□□□ -0.91
CLK1-201ENST00000321356 COILP38432 576 aaPredicted RBP9.36□□□□□ -0.91
CLK1-201ENST00000321356 GCLMP48507 274 aa9.36□□□□□ -0.91
CLK1-201ENST00000321356 HSD17B4P51659 736 aa9.36□□□□□ -0.91
CLK1-201ENST00000321356 SNRPFP62306 86 aaKnown RBP9.36□□□□□ -0.91
CLK1-201ENST00000321356 GTF2BQ00403 316 aa9.36□□□□□ -0.91
CLK1-201ENST00000321356 PPARDQ03181 441 aa9.36□□□□□ -0.91
CLK1-201ENST00000321356 ADCY2Q08462 1091 aa9.36□□□□□ -0.91
CLK1-201ENST00000321356 SLMAPQ14BN4 828 aa9.36□□□□□ -0.91
CLK1-201ENST00000321356 UBAP2Q5T6F2 1119 aaKnown RBP9.36□□□□□ -0.91
CLK1-201ENST00000321356 SEL1L2Q5TEA6 688 aa9.36□□□□□ -0.91
CLK1-201ENST00000321356 MFSD5Q6N075 450 aa9.36□□□□□ -0.91
CLK1-201ENST00000321356 CCDC174Q6PII3 467 aa9.36□□□□□ -0.91
CLK1-201ENST00000321356 CCDC137Q6PK04 289 aaKnown RBP9.36□□□□□ -0.91
CLK1-201ENST00000321356 CYFIP1Q7L576 1253 aa9.36□□□□□ -0.91
CLK1-201ENST00000321356 PIGWQ7Z7B1 504 aa9.36□□□□□ -0.91
CLK1-201ENST00000321356 SLC13A5Q86YT5 568 aaPredicted RBP9.36□□□□□ -0.91
CLK1-201ENST00000321356 XXYLT1Q8NBI6 393 aa9.36□□□□□ -0.91
CLK1-201ENST00000321356 SHC3Q92529 594 aa9.36□□□□□ -0.91
CLK1-201ENST00000321356 SLCO2A1Q92959 643 aa9.36□□□□□ -0.91
CLK1-201ENST00000321356 KAT5Q92993 513 aa9.36□□□□□ -0.91
CLK1-201ENST00000321356 PRMT6Q96LA8 375 aaPredicted RBP9.36□□□□□ -0.91
CLK1-201ENST00000321356 CCDC114Q96M63 670 aa9.36□□□□□ -0.91
CLK1-201ENST00000321356 KREMEN1Q96MU8 473 aa9.36□□□□□ -0.91
CLK1-201ENST00000321356 PCIF1Q9H4Z3 704 aa9.36□□□□□ -0.91
CLK1-201ENST00000321356 HSPBP1Q9NZL4 362 aa9.36□□□□□ -0.91
CLK1-201ENST00000321356 TCRBV7S2A1N4TA0A589 114 aa9.36□□□□□ -0.91
CLK1-201ENST00000321356 CHUKO15111 745 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms