RNA–Protein interactions for RNA: ENST00000321253.6

TUBA3D-201, Transcript of tubulin alpha 3d, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA3D, Length 1,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-201ENST00000321253 LINC00301Q8NCQ3 95 aa16.15■□□□□ 0.18
TUBA3D-201ENST00000321253 ATXN2LQ8WWM7 1075 aaKnown RBP16.15■□□□□ 0.18
TUBA3D-201ENST00000321253 TBC1D13Q9NVG8 400 aa16.15■□□□□ 0.18
TUBA3D-201ENST00000321253 KANSL3Q9P2N6 904 aa16.15■□□□□ 0.18
TUBA3D-201ENST00000321253 PUF60Q9UHX1 559 aaKnown RBP16.15■□□□□ 0.18
TUBA3D-201ENST00000321253 COG5Q9UP83 839 aa16.15■□□□□ 0.18
TUBA3D-201ENST00000321253 RBM19Q9Y4C8 960 aaKnown RBP16.15■□□□□ 0.18
TUBA3D-201ENST00000321253 HES2Q9Y543 173 aa16.15■□□□□ 0.18
TUBA3D-201ENST00000321253 SFI1A8K8P3 1242 aa16.14■□□□□ 0.18
TUBA3D-201ENST00000321253 SPTLC2O15270 562 aa16.14■□□□□ 0.18
TUBA3D-201ENST00000321253 YEATS4O95619 227 aa16.14■□□□□ 0.18
TUBA3D-201ENST00000321253 PLS3P13797 630 aa16.14■□□□□ 0.18
TUBA3D-201ENST00000321253 PBX3P40426 434 aa16.14■□□□□ 0.18
TUBA3D-201ENST00000321253 KRT17Q04695 432 aa16.14■□□□□ 0.18
TUBA3D-201ENST00000321253 MCM6Q14566 821 aa16.14■□□□□ 0.18
TUBA3D-201ENST00000321253 TCEAL5Q5H9L2 206 aa16.14■□□□□ 0.18
TUBA3D-201ENST00000321253 APBB1IPQ7Z5R6 666 aaPredicted RBP16.14■□□□□ 0.18
TUBA3D-201ENST00000321253 LARP4BQ92615 738 aaKnown RBP16.14■□□□□ 0.18
TUBA3D-201ENST00000321253 HLA-CQ95604 372 aa16.14■□□□□ 0.18
TUBA3D-201ENST00000321253 PPP2R3CQ969Q6 453 aa16.14■□□□□ 0.18
TUBA3D-201ENST00000321253 FAM193BQ96PV7 902 aaPredicted RBP16.14■□□□□ 0.18
TUBA3D-201ENST00000321253 GBP3Q9H0R5 595 aa16.14■□□□□ 0.18
TUBA3D-201ENST00000321253 NXF3Q9H4D5 531 aaKnown RBP16.14■□□□□ 0.18
TUBA3D-201ENST00000321253 PDZD7Q9H5P4 517 aa16.14■□□□□ 0.18
TUBA3D-201ENST00000321253 BLOC1S4Q9NUP1 217 aa16.14■□□□□ 0.18
TUBA3D-201ENST00000321253 SPG21Q9NZD8 308 aa16.14■□□□□ 0.18
TUBA3D-201ENST00000321253 LARSQ9P2J5 1176 aaKnown RBP16.14■□□□□ 0.18
TUBA3D-201ENST00000321253 ODF2LQ9ULJ1 636 aa16.14■□□□□ 0.18
TUBA3D-201ENST00000321253 UNC80Q8N2C7 3258 aa16.14■□□□□ 0.18
TUBA3D-201ENST00000321253 NPHP3-ACAD11A0A0J9YXS1 232 aa16.14■□□□□ 0.17
TUBA3D-201ENST00000321253 SLC16A4O15374 487 aa16.14■□□□□ 0.17
TUBA3D-201ENST00000321253 DNAJB1P25685 340 aa16.14■□□□□ 0.17
TUBA3D-201ENST00000321253 DDIT3P35638 169 aa16.14■□□□□ 0.17
TUBA3D-201ENST00000321253 MLH1P40692 756 aa16.14■□□□□ 0.17
TUBA3D-201ENST00000321253 BCAR1P56945 870 aa16.14■□□□□ 0.17
TUBA3D-201ENST00000321253 MRPS5P82675 430 aaKnown RBP16.14■□□□□ 0.17
TUBA3D-201ENST00000321253 PLCB3Q01970 1234 aa16.14■□□□□ 0.17
TUBA3D-201ENST00000321253 CACNB1Q02641 598 aaPredicted RBP16.14■□□□□ 0.17
TUBA3D-201ENST00000321253 PKP1Q13835 747 aa16.14■□□□□ 0.17
TUBA3D-201ENST00000321253 AAK1Q2M2I8 961 aa16.14■□□□□ 0.17
TUBA3D-201ENST00000321253 ARSHQ5FYA8 562 aa16.14■□□□□ 0.17
TUBA3D-201ENST00000321253 RRAGBQ5VZM2 374 aa16.14■□□□□ 0.17
TUBA3D-201ENST00000321253 MICAL1Q8TDZ2 1067 aa16.14■□□□□ 0.17
TUBA3D-201ENST00000321253 SPIRE2Q8WWL2 714 aa16.14■□□□□ 0.17
TUBA3D-201ENST00000321253 RNF39Q9H2S5 420 aa16.14■□□□□ 0.17
TUBA3D-201ENST00000321253 TMEM134Q9H6X4 195 aa16.14■□□□□ 0.17
TUBA3D-201ENST00000321253 TLR9Q9NR96 1032 aa16.14■□□□□ 0.17
TUBA3D-201ENST00000321253 ARHGAP28Q9P2N2 729 aa16.14■□□□□ 0.17
TUBA3D-201ENST00000321253 STK17AQ9UEE5 414 aa16.14■□□□□ 0.17
TUBA3D-201ENST00000321253 DAXXQ9UER7 740 aaPredicted RBP16.14■□□□□ 0.17
TUBA3D-201ENST00000321253 LZTS1Q9Y250 596 aa16.14■□□□□ 0.17
TUBA3D-201ENST00000321253 USP20Q9Y2K6 914 aa16.14■□□□□ 0.17
TUBA3D-201ENST00000321253 GIT1Q9Y2X7 761 aa16.14■□□□□ 0.17
TUBA3D-201ENST00000321253 MYO7AQ13402 2215 aa16.13■□□□□ 0.17
TUBA3D-201ENST00000321253 PLXNA4Q9HCM2 1894 aa16.13■□□□□ 0.17
TUBA3D-201ENST00000321253 TTLL13PA6NNM8 815 aa16.13■□□□□ 0.17
TUBA3D-201ENST00000321253 PPP6R2O75170 966 aa16.13■□□□□ 0.17
TUBA3D-201ENST00000321253 FAM13AO94988 1023 aa16.13■□□□□ 0.17
TUBA3D-201ENST00000321253 POMCP01189 267 aa16.13■□□□□ 0.17
TUBA3D-201ENST00000321253 STRN3Q13033 797 aa16.13■□□□□ 0.17
TUBA3D-201ENST00000321253 CAMK1Q14012 370 aa16.13■□□□□ 0.17
TUBA3D-201ENST00000321253 DCAF4L1Q3SXM0 396 aa16.13■□□□□ 0.17
TUBA3D-201ENST00000321253 ATF7IP2Q5U623 682 aa16.13■□□□□ 0.17
TUBA3D-201ENST00000321253 ATL3Q6DD88 541 aa16.13■□□□□ 0.17
TUBA3D-201ENST00000321253 CCDC73Q6ZRK6 1079 aa16.13■□□□□ 0.17
TUBA3D-201ENST00000321253 SLC39A11Q8N1S5 342 aa16.13■□□□□ 0.17
TUBA3D-201ENST00000321253 LRRC15Q8TF66 581 aa16.13■□□□□ 0.17
TUBA3D-201ENST00000321253 MRPS27Q92552 414 aaKnown RBP16.13■□□□□ 0.17
TUBA3D-201ENST00000321253 TMEM169Q96HH4 297 aa16.13■□□□□ 0.17
TUBA3D-201ENST00000321253 GAD1Q99259 594 aa16.13■□□□□ 0.17
TUBA3D-201ENST00000321253 REEP2Q9BRK0 252 aa16.13■□□□□ 0.17
TUBA3D-201ENST00000321253 MRPL4Q9BYD3 311 aaKnown RBP16.13■□□□□ 0.17
TUBA3D-201ENST00000321253 NRDE2Q9H7Z3 1164 aa16.13■□□□□ 0.17
TUBA3D-201ENST00000321253 PARP2Q9UGN5 583 aa16.13■□□□□ 0.17
TUBA3D-201ENST00000321253 CFAP45Q9UL16 551 aa16.13■□□□□ 0.17
TUBA3D-201ENST00000321253 MYH11P35749 1972 aa16.13■□□□□ 0.17
TUBA3D-201ENST00000321253 ARL5CA6NH57 179 aa16.12■□□□□ 0.17
TUBA3D-201ENST00000321253 H0YCG3 227 aa16.12■□□□□ 0.17
TUBA3D-201ENST00000321253 NCK2O43639 380 aa16.12■□□□□ 0.17
TUBA3D-201ENST00000321253 TBCAO75347 108 aaKnown RBP16.12■□□□□ 0.17
TUBA3D-201ENST00000321253 AKAP5P24588 427 aa16.12■□□□□ 0.17
TUBA3D-201ENST00000321253 KCNG4Q8TDN1 519 aa16.12■□□□□ 0.17
TUBA3D-201ENST00000321253 RPS6KC1Q96S38 1066 aa16.12■□□□□ 0.17
TUBA3D-201ENST00000321253 NTPCRQ9BSD7 190 aaKnown RBP16.12■□□□□ 0.17
TUBA3D-201ENST00000321253 ZHX3Q9H4I2 956 aa16.12■□□□□ 0.17
TUBA3D-201ENST00000321253 PARVGQ9HBI0 331 aa16.12■□□□□ 0.17
TUBA3D-201ENST00000321253 NT5C1B-RDH14C9J2C7 533 aa16.11■□□□□ 0.17
TUBA3D-201ENST00000321253 EDN1P05305 212 aa16.11■□□□□ 0.17
TUBA3D-201ENST00000321253 IRS1P35568 1242 aa16.11■□□□□ 0.17
TUBA3D-201ENST00000321253 STAT6P42226 847 aa16.11■□□□□ 0.17
TUBA3D-201ENST00000321253 AFF1P51825 1210 aaKnown RBP16.11■□□□□ 0.17
TUBA3D-201ENST00000321253 TFF2Q03403 129 aa16.11■□□□□ 0.17
TUBA3D-201ENST00000321253 TJAP1Q5JTD0 557 aa16.11■□□□□ 0.17
TUBA3D-201ENST00000321253 NT5DC1Q5TFE4 455 aa16.11■□□□□ 0.17
TUBA3D-201ENST00000321253 EEF1DP3Q658K8 133 aa16.11■□□□□ 0.17
TUBA3D-201ENST00000321253 PDE12Q6L8Q7 609 aaKnown RBP16.11■□□□□ 0.17
TUBA3D-201ENST00000321253 EP400NLQ6ZTU2 488 aa16.11■□□□□ 0.17
TUBA3D-201ENST00000321253 ZNF280BQ86YH2 543 aa16.11■□□□□ 0.17
TUBA3D-201ENST00000321253 MYCT1Q8N699 235 aa16.11■□□□□ 0.17
TUBA3D-201ENST00000321253 ZFP42Q96MM3 310 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms