RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 IMPDH2P12268 514 aa17.85■□□□□ 0.45
SMCHD1-201ENST00000320876 TYK2P29597 1187 aa17.85■□□□□ 0.45
SMCHD1-201ENST00000320876 ELF1P32519 619 aa17.85■□□□□ 0.45
SMCHD1-201ENST00000320876 TMEM154Q6P9G4 183 aa17.85■□□□□ 0.45
SMCHD1-201ENST00000320876 KIAA0825Q8IV33 1275 aa17.85■□□□□ 0.45
SMCHD1-201ENST00000320876 GIMAP8Q8ND71 665 aaPredicted RBP17.85■□□□□ 0.45
SMCHD1-201ENST00000320876 SCFD1Q8WVM8 642 aa17.85■□□□□ 0.45
SMCHD1-201ENST00000320876 FBXL5Q9UKA1 691 aa17.85■□□□□ 0.45
SMCHD1-201ENST00000320876 RECQLP46063 649 aaPredicted RBP17.84■□□□□ 0.45
SMCHD1-201ENST00000320876 DSG1Q02413 1049 aa17.84■□□□□ 0.45
SMCHD1-201ENST00000320876 PIGSQ96S52 555 aa17.84■□□□□ 0.45
SMCHD1-201ENST00000320876 OSTNP61366 133 aa17.84■□□□□ 0.45
SMCHD1-201ENST00000320876 LONP2Q86WA8 852 aa17.84■□□□□ 0.45
SMCHD1-201ENST00000320876 GON4LQ3T8J9 2241 aa17.84■□□□□ 0.45
SMCHD1-201ENST00000320876 C1orf228Q6PIY5 440 aa17.84■□□□□ 0.45
SMCHD1-201ENST00000320876 ELMSAN1Q6PJG2 1045 aa17.84■□□□□ 0.45
SMCHD1-201ENST00000320876 CLEC4FQ8N1N0 589 aa17.84■□□□□ 0.45
SMCHD1-201ENST00000320876 MRPS26Q9BYN8 205 aaKnown RBP17.84■□□□□ 0.45
SMCHD1-201ENST00000320876 ZSCAN32Q9NX65 697 aa17.84■□□□□ 0.45
SMCHD1-201ENST00000320876 ZFATQ9P243 1243 aa17.84■□□□□ 0.45
SMCHD1-201ENST00000320876 HDAC6Q9UBN7 1215 aa17.84■□□□□ 0.45
SMCHD1-201ENST00000320876 UBXN2AP68543 259 aa17.84■□□□□ 0.45
SMCHD1-201ENST00000320876 KPNB1Q14974 876 aaKnown RBP17.84■□□□□ 0.45
SMCHD1-201ENST00000320876 SLC44A4Q53GD3 710 aa17.84■□□□□ 0.45
SMCHD1-201ENST00000320876 LRIG3Q6UXM1 1119 aa17.84■□□□□ 0.45
SMCHD1-201ENST00000320876 CDKL3Q8IVW4 592 aaPredicted RBP17.84■□□□□ 0.45
SMCHD1-201ENST00000320876 DHX40Q8IX18 779 aaKnown RBP17.84■□□□□ 0.45
SMCHD1-201ENST00000320876 RHOT1Q8IXI2 618 aa17.84■□□□□ 0.45
SMCHD1-201ENST00000320876 CCT8L2Q96SF2 557 aa17.84■□□□□ 0.45
SMCHD1-201ENST00000320876 GOLGA8IPA6NC78 632 aa17.84■□□□□ 0.45
SMCHD1-201ENST00000320876 FGFR4P22455 802 aa17.84■□□□□ 0.45
SMCHD1-201ENST00000320876 UBE3AQ05086 875 aa17.84■□□□□ 0.45
SMCHD1-201ENST00000320876 THEM5Q8N1Q8 247 aa17.84■□□□□ 0.45
SMCHD1-201ENST00000320876 SERPINB13Q9UIV8 391 aa17.84■□□□□ 0.45
SMCHD1-201ENST00000320876 ENO4A6NNW6 628 aa17.84■□□□□ 0.45
SMCHD1-201ENST00000320876 M0R3G1 203 aa17.84■□□□□ 0.45
SMCHD1-201ENST00000320876 BMP3P12645 472 aa17.84■□□□□ 0.45
SMCHD1-201ENST00000320876 SERPINB3P29508 390 aa17.84■□□□□ 0.45
SMCHD1-201ENST00000320876 KHDRBS2Q5VWX1 349 aaKnown RBP17.84■□□□□ 0.45
SMCHD1-201ENST00000320876 TUBGCP3Q96CW5 907 aa17.84■□□□□ 0.45
SMCHD1-201ENST00000320876 CNBD2Q96M20 576 aa17.84■□□□□ 0.45
SMCHD1-201ENST00000320876 PRPF18Q99633 342 aaKnown RBP17.84■□□□□ 0.45
SMCHD1-201ENST00000320876 MAP3K15Q6ZN16 1313 aa17.84■□□□□ 0.45
SMCHD1-201ENST00000320876 NCAPHQ15003 741 aa17.84■□□□□ 0.45
SMCHD1-201ENST00000320876 Q3C1V9 767 aa17.84■□□□□ 0.45
SMCHD1-201ENST00000320876 TTC39CQ8N584 583 aa17.84■□□□□ 0.45
SMCHD1-201ENST00000320876 CYFIP2Q96F07 1278 aa17.83■□□□□ 0.45
SMCHD1-201ENST00000320876 TRABDQ9H4I3 376 aa17.83■□□□□ 0.45
SMCHD1-201ENST00000320876 MAD2L2Q9UI95 211 aa17.83■□□□□ 0.45
SMCHD1-201ENST00000320876 FAM32AQ9Y421 112 aaKnown RBP17.83■□□□□ 0.45
SMCHD1-201ENST00000320876 KCNH2Q12809 1159 aa17.83■□□□□ 0.45
SMCHD1-201ENST00000320876 CENPPQ6IPU0 288 aa17.83■□□□□ 0.45
SMCHD1-201ENST00000320876 PDXDC2PQ6P474 469 aa17.83■□□□□ 0.45
SMCHD1-201ENST00000320876 ARHGEF1Q92888 912 aaKnown RBP17.83■□□□□ 0.45
SMCHD1-201ENST00000320876 SYTL2Q9HCH5 934 aa17.83■□□□□ 0.45
SMCHD1-201ENST00000320876 TNFAIP2Q03169 654 aa17.83■□□□□ 0.45
SMCHD1-201ENST00000320876 PRUNE1Q86TP1 453 aa17.83■□□□□ 0.45
SMCHD1-201ENST00000320876 CCDC103Q8IW40 242 aa17.83■□□□□ 0.45
SMCHD1-201ENST00000320876 DCPSQ96C86 337 aaKnown RBP17.83■□□□□ 0.45
SMCHD1-201ENST00000320876 TRIM62Q9BVG3 475 aa17.83■□□□□ 0.45
SMCHD1-201ENST00000320876 ESYT3A0FGR9 886 aa17.83■□□□□ 0.44
SMCHD1-201ENST00000320876 APOL1O14791 398 aa17.83■□□□□ 0.44
SMCHD1-201ENST00000320876 LRRC14Q15048 493 aa17.83■□□□□ 0.44
SMCHD1-201ENST00000320876 TRPM8Q7Z2W7 1104 aa17.83■□□□□ 0.44
SMCHD1-201ENST00000320876 DNAJC9Q8WXX5 260 aa17.83■□□□□ 0.44
SMCHD1-201ENST00000320876 XXYLT1Q8NBI6 393 aa17.83■□□□□ 0.44
SMCHD1-201ENST00000320876 PPHLN1Q8NEY8 458 aaKnown RBP17.83■□□□□ 0.44
SMCHD1-201ENST00000320876 AGBL1Q96MI9 1066 aa17.83■□□□□ 0.44
SMCHD1-201ENST00000320876 PARVAQ9NVD7 372 aa17.83■□□□□ 0.44
SMCHD1-201ENST00000320876 GOLGA8JA6NMD2 632 aa17.83■□□□□ 0.44
SMCHD1-201ENST00000320876 EIF3DO15371 548 aaKnown RBP eCLIP17.83■□□□□ 0.44
SMCHD1-201ENST00000320876 NLRP4Q96MN2 994 aa17.83■□□□□ 0.44
SMCHD1-201ENST00000320876 KCNK16Q96T55 309 aa17.83■□□□□ 0.44
SMCHD1-201ENST00000320876 PRAMEP78395 509 aa17.83■□□□□ 0.44
SMCHD1-201ENST00000320876 EAPPQ56P03 285 aaPredicted RBP17.83■□□□□ 0.44
SMCHD1-201ENST00000320876 FBXW10Q5XX13 1052 aa17.83■□□□□ 0.44
SMCHD1-201ENST00000320876 C4BPBP20851 252 aa17.82■□□□□ 0.44
SMCHD1-201ENST00000320876 ARSEP51690 589 aa17.82■□□□□ 0.44
SMCHD1-201ENST00000320876 SARS2Q9NP81 518 aaKnown RBP17.82■□□□□ 0.44
SMCHD1-201ENST00000320876 LEMD3Q9Y2U8 911 aa17.82■□□□□ 0.44
SMCHD1-201ENST00000320876 MTERF2Q49AM1 385 aa17.82■□□□□ 0.44
SMCHD1-201ENST00000320876 PPP1R37O75864 691 aa17.82■□□□□ 0.44
SMCHD1-201ENST00000320876 KRT17Q04695 432 aa17.82■□□□□ 0.44
SMCHD1-201ENST00000320876 PCYOX1LQ8NBM8 494 aa17.82■□□□□ 0.44
SMCHD1-201ENST00000320876 ACAP3Q96P50 834 aa17.82■□□□□ 0.44
SMCHD1-201ENST00000320876 DHX36Q9H2U1 1008 aaKnown RBP17.82■□□□□ 0.44
SMCHD1-201ENST00000320876 OSBPP22059 807 aa17.82■□□□□ 0.44
SMCHD1-201ENST00000320876 DNAJC10Q8IXB1 793 aa17.82■□□□□ 0.44
SMCHD1-201ENST00000320876 ATP7BP35670 1465 aa17.82■□□□□ 0.44
SMCHD1-201ENST00000320876 RASSF9O75901 435 aa17.82■□□□□ 0.44
SMCHD1-201ENST00000320876 CDC25AP30304 524 aa17.82■□□□□ 0.44
SMCHD1-201ENST00000320876 GNA15P30679 374 aa17.82■□□□□ 0.44
SMCHD1-201ENST00000320876 ZNF473Q8WTR7 871 aaKnown RBP17.82■□□□□ 0.44
SMCHD1-201ENST00000320876 PDCD6IPQ8WUM4 868 aaKnown RBP17.82■□□□□ 0.44
SMCHD1-201ENST00000320876 KIF20BQ96Q89 1820 aa17.82■□□□□ 0.44
SMCHD1-201ENST00000320876 CLDN3O15551 220 aa17.82■□□□□ 0.44
SMCHD1-201ENST00000320876 SULF1Q8IWU6 871 aa17.82■□□□□ 0.44
SMCHD1-201ENST00000320876 PDP2Q9P2J9 529 aa17.82■□□□□ 0.44
SMCHD1-201ENST00000320876 STAP1Q9ULZ2 295 aa17.82■□□□□ 0.44
SMCHD1-201ENST00000320876 PLEKHG1Q9ULL1 1385 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms