RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 ASTLQ6HA08 431 aaPredicted RBP15.87■□□□□ 0.13
RPP40-201ENST00000319533 CYP26C1Q6V0L0 522 aa15.87■□□□□ 0.13
RPP40-201ENST00000319533 CCDC149Q6ZUS6 474 aa15.87■□□□□ 0.13
RPP40-201ENST00000319533 OTOP3Q7RTS5 596 aa15.87■□□□□ 0.13
RPP40-201ENST00000319533 COLGALT2Q8IYK4 626 aa15.87■□□□□ 0.13
RPP40-201ENST00000319533 ACSF2Q96CM8 615 aaPredicted RBP15.87■□□□□ 0.13
RPP40-201ENST00000319533 CCDC51Q96ER9 411 aa15.87■□□□□ 0.13
RPP40-201ENST00000319533 HERC2P3Q9BVR0 1158 aa15.87■□□□□ 0.13
RPP40-201ENST00000319533 SLKQ9H2G2 1235 aaPredicted RBP15.87■□□□□ 0.13
RPP40-201ENST00000319533 ZSWIM4Q9H7M6 989 aa15.87■□□□□ 0.13
RPP40-201ENST00000319533 MRPL17Q9NRX2 175 aaKnown RBP15.87■□□□□ 0.13
RPP40-201ENST00000319533 MARCH5Q9NX47 278 aa15.87■□□□□ 0.13
RPP40-201ENST00000319533 RGL1Q9NZL6 768 aa15.87■□□□□ 0.13
RPP40-201ENST00000319533 CCNT1O60563 726 aaKnown RBP15.86■□□□□ 0.13
RPP40-201ENST00000319533 SLITRK3O94933 977 aa15.86■□□□□ 0.13
RPP40-201ENST00000319533 LYPLA2O95372 231 aa15.86■□□□□ 0.13
RPP40-201ENST00000319533 C1RP00736 705 aa15.86■□□□□ 0.13
RPP40-201ENST00000319533 XBP1P17861 261 aa15.86■□□□□ 0.13
RPP40-201ENST00000319533 NBL1P41271 181 aa15.86■□□□□ 0.13
RPP40-201ENST00000319533 PTENP60484 403 aa15.86■□□□□ 0.13
RPP40-201ENST00000319533 DSC1Q08554 894 aa15.86■□□□□ 0.13
RPP40-201ENST00000319533 MXD4Q14582 209 aaPredicted RBP15.86■□□□□ 0.13
RPP40-201ENST00000319533 RNF149Q8NC42 400 aa15.86■□□□□ 0.13
RPP40-201ENST00000319533 OXER1Q8TDS5 423 aa15.86■□□□□ 0.13
RPP40-201ENST00000319533 DYDC2Q96IM9 177 aa15.86■□□□□ 0.13
RPP40-201ENST00000319533 FAM193BQ96PV7 902 aaPredicted RBP15.86■□□□□ 0.13
RPP40-201ENST00000319533 RPS6KC1Q96S38 1066 aa15.86■□□□□ 0.13
RPP40-201ENST00000319533 RXFP1Q9HBX9 757 aa15.86■□□□□ 0.13
RPP40-201ENST00000319533 XPNPEP1Q9NQW7 623 aa15.86■□□□□ 0.13
RPP40-201ENST00000319533 SSX2IPQ9Y2D8 614 aa15.86■□□□□ 0.13
RPP40-201ENST00000319533 IPPQ9Y573 584 aa15.86■□□□□ 0.13
RPP40-201ENST00000319533 ARID2Q68CP9 1835 aa15.85■□□□□ 0.13
RPP40-201ENST00000319533 ZBTB39O15060 712 aa15.85■□□□□ 0.13
RPP40-201ENST00000319533 TSPAN1O60635 241 aa15.85■□□□□ 0.13
RPP40-201ENST00000319533 PFKFB2O60825 505 aa15.85■□□□□ 0.13
RPP40-201ENST00000319533 POMCP01189 267 aa15.85■□□□□ 0.13
RPP40-201ENST00000319533 ITGA4P13612 1032 aa15.85■□□□□ 0.13
RPP40-201ENST00000319533 TDGQ13569 410 aa15.85■□□□□ 0.13
RPP40-201ENST00000319533 AMHR2Q16671 573 aa15.85■□□□□ 0.13
RPP40-201ENST00000319533 XKR9Q5GH70 373 aa15.85■□□□□ 0.13
RPP40-201ENST00000319533 EARS2Q5JPH6 523 aaKnown RBP15.85■□□□□ 0.13
RPP40-201ENST00000319533 KIAA0319Q5VV43 1072 aa15.85■□□□□ 0.13
RPP40-201ENST00000319533 PIK3AP1Q6ZUJ8 805 aa15.85■□□□□ 0.13
RPP40-201ENST00000319533 SLFN12Q8IYM2 578 aa15.85■□□□□ 0.13
RPP40-201ENST00000319533 MTRQ99707 1265 aa15.85■□□□□ 0.13
RPP40-201ENST00000319533 HSD17B14Q9BPX1 270 aa15.85■□□□□ 0.13
RPP40-201ENST00000319533 EIF2AQ9BY44 585 aaKnown RBP15.85■□□□□ 0.13
RPP40-201ENST00000319533 GJB4Q9NTQ9 266 aa15.85■□□□□ 0.13
RPP40-201ENST00000319533 C2orf16Q68DN1 1984 aa15.85■□□□□ 0.13
RPP40-201ENST00000319533 ARL5CA6NH57 179 aa15.84■□□□□ 0.13
RPP40-201ENST00000319533 ERLIN2O94905 339 aa15.84■□□□□ 0.13
RPP40-201ENST00000319533 CTDNEP1O95476 244 aa15.84■□□□□ 0.13
RPP40-201ENST00000319533 SSBP05455 408 aaKnown RBP eCLIP15.84■□□□□ 0.13
RPP40-201ENST00000319533 URODP06132 367 aa15.84■□□□□ 0.13
RPP40-201ENST00000319533 NPR3P17342 541 aa15.84■□□□□ 0.13
RPP40-201ENST00000319533 CTTNQ14247 550 aaKnown RBP15.84■□□□□ 0.13
RPP40-201ENST00000319533 CWF19L1Q69YN2 538 aaKnown RBP15.84■□□□□ 0.13
RPP40-201ENST00000319533 NCAPH2Q6IBW4 605 aa15.84■□□□□ 0.13
RPP40-201ENST00000319533 TAS1R1Q7RTX1 841 aa15.84■□□□□ 0.13
RPP40-201ENST00000319533 GPR65Q8IYL9 337 aa15.84■□□□□ 0.13
RPP40-201ENST00000319533 HDAC7Q8WUI4 952 aa15.84■□□□□ 0.13
RPP40-201ENST00000319533 TNFRSF25Q93038 417 aa15.84■□□□□ 0.13
RPP40-201ENST00000319533 GAD1Q99259 594 aa15.84■□□□□ 0.13
RPP40-201ENST00000319533 NFKBIZQ9BYH8 718 aa15.84■□□□□ 0.13
RPP40-201ENST00000319533 CSRNP2Q9H175 543 aa15.84■□□□□ 0.13
RPP40-201ENST00000319533 KCNK12Q9HB15 430 aa15.84■□□□□ 0.13
RPP40-201ENST00000319533 CHST7Q9NS84 486 aa15.84■□□□□ 0.13
RPP40-201ENST00000319533 BMP2KQ9NSY1 1161 aaPredicted RBP15.84■□□□□ 0.13
RPP40-201ENST00000319533 MIOSQ9NXC5 875 aa15.84■□□□□ 0.13
RPP40-201ENST00000319533 IGSF9Q9P2J2 1179 aa15.84■□□□□ 0.13
RPP40-201ENST00000319533 DPP7Q9UHL4 492 aa15.84■□□□□ 0.13
RPP40-201ENST00000319533 TPCN1Q9ULQ1 816 aa15.84■□□□□ 0.13
RPP40-201ENST00000319533 DUSP12Q9UNI6 340 aa15.84■□□□□ 0.13
RPP40-201ENST00000319533 RIF1Q5UIP0 2472 aaKnown RBP15.84■□□□□ 0.13
RPP40-201ENST00000319533 PTPRZ1P23471 2315 aaPredicted RBP15.83■□□□□ 0.12
RPP40-201ENST00000319533 TEX28O15482 410 aa15.83■□□□□ 0.12
RPP40-201ENST00000319533 BAG4O95429 457 aaKnown RBP15.83■□□□□ 0.12
RPP40-201ENST00000319533 ADH1AP07327 375 aa15.83■□□□□ 0.12
RPP40-201ENST00000319533 ARL2P36404 184 aa15.83■□□□□ 0.12
RPP40-201ENST00000319533 ANAPC15P60006 121 aa15.83■□□□□ 0.12
RPP40-201ENST00000319533 DSG1Q02413 1049 aa15.83■□□□□ 0.12
RPP40-201ENST00000319533 MBTD1Q05BQ5 628 aa15.83■□□□□ 0.12
RPP40-201ENST00000319533 NOTUMQ6P988 496 aa15.83■□□□□ 0.12
RPP40-201ENST00000319533 WDR6Q9NNW5 1121 aaKnown RBP15.83■□□□□ 0.12
RPP40-201ENST00000319533 MAN1C1Q9NR34 630 aa15.83■□□□□ 0.12
RPP40-201ENST00000319533 ANKEF1Q9NU02 776 aa15.83■□□□□ 0.12
RPP40-201ENST00000319533 GIT1Q9Y2X7 761 aa15.83■□□□□ 0.12
RPP40-201ENST00000319533 ZMYM2Q9UBW7 1377 aa15.83■□□□□ 0.12
RPP40-201ENST00000319533 FAM205CA6NFA0 338 aa15.82■□□□□ 0.12
RPP40-201ENST00000319533 MARCH6O60337 910 aa15.82■□□□□ 0.12
RPP40-201ENST00000319533 N4BP1O75113 896 aaKnown RBP15.82■□□□□ 0.12
RPP40-201ENST00000319533 DGAT1O75907 488 aa15.82■□□□□ 0.12
RPP40-201ENST00000319533 FDPSP14324 419 aaKnown RBP15.82■□□□□ 0.12
RPP40-201ENST00000319533 AOC1P19801 751 aa15.82■□□□□ 0.12
RPP40-201ENST00000319533 MLH1P40692 756 aa15.82■□□□□ 0.12
RPP40-201ENST00000319533 OR1G1P47890 313 aa15.82■□□□□ 0.12
RPP40-201ENST00000319533 GLUD2P49448 558 aa15.82■□□□□ 0.12
RPP40-201ENST00000319533 AK2P54819 239 aa15.82■□□□□ 0.12
RPP40-201ENST00000319533 CYP4A11Q02928 519 aa15.82■□□□□ 0.12
RPP40-201ENST00000319533 NCBP1Q09161 790 aaKnown RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms