RNA–Protein interactions for RNA: ENST00000319449.8

RUFY1-201, Transcript of RUN and FYVE domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RUFY1, Length 2,646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY1-201ENST00000319449 ARMCX3Q9UH62 379 aaPredicted RBP22.7■■□□□ 1.22
RUFY1-201ENST00000319449 G3BP2Q9UN86 482 aaKnown RBP22.7■■□□□ 1.22
RUFY1-201ENST00000319449 KIAA1551Q9HCM1 1747 aa22.69■■□□□ 1.22
RUFY1-201ENST00000319449 USP17L3A6NCW0 530 aa22.69■■□□□ 1.22
RUFY1-201ENST00000319449 USP17L4A6NCW7 530 aa22.69■■□□□ 1.22
RUFY1-201ENST00000319449 PALM3A6NDB9 673 aaPredicted RBP22.69■■□□□ 1.22
RUFY1-201ENST00000319449 AFPP02771 609 aaKnown RBP22.69■■□□□ 1.22
RUFY1-201ENST00000319449 ABCB4P21439 1286 aa22.69■■□□□ 1.22
RUFY1-201ENST00000319449 PPATQ06203 517 aa22.69■■□□□ 1.22
RUFY1-201ENST00000319449 USP17L1Q7RTZ2 530 aa22.69■■□□□ 1.22
RUFY1-201ENST00000319449 REXO1Q8N1G1 1221 aaKnown RBP22.69■■□□□ 1.22
RUFY1-201ENST00000319449 RUNDC3BQ96NL0 473 aa22.69■■□□□ 1.22
RUFY1-201ENST00000319449 LRMDAQ9H2I8 198 aa22.69■■□□□ 1.22
RUFY1-201ENST00000319449 BMP2KQ9NSY1 1161 aaPredicted RBP22.69■■□□□ 1.22
RUFY1-201ENST00000319449 EMILIN3Q9NT22 766 aa22.69■■□□□ 1.22
RUFY1-201ENST00000319449 KLRF2D3W0D1 207 aa22.69■■□□□ 1.22
RUFY1-201ENST00000319449 PODXLO00592 558 aa22.69■■□□□ 1.22
RUFY1-201ENST00000319449 TDP2O95551 362 aa22.69■■□□□ 1.22
RUFY1-201ENST00000319449 ACADSP16219 412 aa22.69■■□□□ 1.22
RUFY1-201ENST00000319449 SP100P23497 879 aaPredicted RBP22.69■■□□□ 1.22
RUFY1-201ENST00000319449 CACNB1Q02641 598 aaPredicted RBP22.69■■□□□ 1.22
RUFY1-201ENST00000319449 MKRN3Q13064 507 aaKnown RBP22.69■■□□□ 1.22
RUFY1-201ENST00000319449 PDIA5Q14554 519 aa22.69■■□□□ 1.22
RUFY1-201ENST00000319449 AADACL2Q6P093 401 aa22.69■■□□□ 1.22
RUFY1-201ENST00000319449 ALG3Q92685 438 aa22.69■■□□□ 1.22
RUFY1-201ENST00000319449 NSUN4Q96CB9 384 aaKnown RBP22.69■■□□□ 1.22
RUFY1-201ENST00000319449 TMEM237Q96Q45 408 aa22.69■■□□□ 1.22
RUFY1-201ENST00000319449 TMOD4Q9NZQ9 345 aa22.69■■□□□ 1.22
RUFY1-201ENST00000319449 PCDHA2Q9Y5H9 948 aa22.69■■□□□ 1.22
RUFY1-201ENST00000319449 IGSF9BQ9UPX0 1349 aa22.69■■□□□ 1.22
RUFY1-201ENST00000319449 CHRNA3P32297 505 aa22.68■■□□□ 1.22
RUFY1-201ENST00000319449 PTDSS1P48651 473 aaKnown RBP22.68■■□□□ 1.22
RUFY1-201ENST00000319449 TSNAXIP1Q2TAA8 658 aa22.68■■□□□ 1.22
RUFY1-201ENST00000319449 SBK1Q52WX2 424 aa22.68■■□□□ 1.22
RUFY1-201ENST00000319449 ZC3H3Q8IXZ2 948 aaKnown RBP22.68■■□□□ 1.22
RUFY1-201ENST00000319449 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP22.68■■□□□ 1.22
RUFY1-201ENST00000319449 ASAP3Q8TDY4 903 aa22.68■■□□□ 1.22
RUFY1-201ENST00000319449 DNAJC9Q8WXX5 260 aa22.68■■□□□ 1.22
RUFY1-201ENST00000319449 EPAS1Q99814 870 aa22.68■■□□□ 1.22
RUFY1-201ENST00000319449 DDX23Q9BUQ8 820 aaKnown RBP22.68■■□□□ 1.22
RUFY1-201ENST00000319449 MCM9Q9NXL9 1143 aa22.68■■□□□ 1.22
RUFY1-201ENST00000319449 SNED1Q8TER0 1413 aa22.68■■□□□ 1.22
RUFY1-201ENST00000319449 VCAM1P19320 739 aa22.68■■□□□ 1.22
RUFY1-201ENST00000319449 JAM2P57087 298 aa22.68■■□□□ 1.22
RUFY1-201ENST00000319449 HERC4Q5GLZ8 1057 aaPredicted RBP22.68■■□□□ 1.22
RUFY1-201ENST00000319449 RNF220Q5VTB9 566 aa22.68■■□□□ 1.22
RUFY1-201ENST00000319449 INTS8Q75QN2 995 aaKnown RBP22.68■■□□□ 1.22
RUFY1-201ENST00000319449 VSIG1Q86XK7 387 aa22.68■■□□□ 1.22
RUFY1-201ENST00000319449 FAM13CQ8NE31 585 aa22.68■■□□□ 1.22
RUFY1-201ENST00000319449 LNX1Q8TBB1 728 aaPredicted RBP22.68■■□□□ 1.22
RUFY1-201ENST00000319449 EYA3Q99504 573 aa22.68■■□□□ 1.22
RUFY1-201ENST00000319449 COA1Q9GZY4 146 aa22.68■■□□□ 1.22
RUFY1-201ENST00000319449 SPON1Q9HCB6 807 aa22.68■■□□□ 1.22
RUFY1-201ENST00000319449 DLGAP2Q9P1A6 1054 aa22.68■■□□□ 1.22
RUFY1-201ENST00000319449 STX8Q9UNK0 236 aa22.68■■□□□ 1.22
RUFY1-201ENST00000319449 NCANO14594 1321 aa22.68■■□□□ 1.22
RUFY1-201ENST00000319449 FAM170AA1A519 330 aa22.67■■□□□ 1.22
RUFY1-201ENST00000319449 FOXO6A8MYZ6 492 aa22.67■■□□□ 1.22
RUFY1-201ENST00000319449 H0Y3Z8 333 aa22.67■■□□□ 1.22
RUFY1-201ENST00000319449 STX2P32856 288 aa22.67■■□□□ 1.22
RUFY1-201ENST00000319449 RFC5P40937 340 aa22.67■■□□□ 1.22
RUFY1-201ENST00000319449 ACVR2BQ13705 512 aa22.67■■□□□ 1.22
RUFY1-201ENST00000319449 MFSD14BQ5SR56 506 aa22.67■■□□□ 1.22
RUFY1-201ENST00000319449 CCDC65Q8IXS2 484 aa22.67■■□□□ 1.22
RUFY1-201ENST00000319449 WDR66Q8TBY9 1149 aa22.67■■□□□ 1.22
RUFY1-201ENST00000319449 MYLK2Q9H1R3 596 aa22.67■■□□□ 1.22
RUFY1-201ENST00000319449 BCS1LQ9Y276 419 aa22.67■■□□□ 1.22
RUFY1-201ENST00000319449 PCDHA3Q9Y5H8 950 aa22.67■■□□□ 1.22
RUFY1-201ENST00000319449 GFPT2O94808 682 aa22.67■■□□□ 1.22
RUFY1-201ENST00000319449 USP17L8P0C7I0 530 aa22.67■■□□□ 1.22
RUFY1-201ENST00000319449 MPP2Q14168 576 aa22.67■■□□□ 1.22
RUFY1-201ENST00000319449 MTFR1Q15390 333 aa22.67■■□□□ 1.22
RUFY1-201ENST00000319449 CLUL1Q15846 466 aa22.67■■□□□ 1.22
RUFY1-201ENST00000319449 EDRF1Q3B7T1 1238 aa22.67■■□□□ 1.22
RUFY1-201ENST00000319449 DALRD3Q5D0E6 543 aaKnown RBP22.67■■□□□ 1.22
RUFY1-201ENST00000319449 DCAF17Q5H9S7 520 aaPredicted RBP22.67■■□□□ 1.22
RUFY1-201ENST00000319449 GJB7Q6PEY0 223 aa22.67■■□□□ 1.22
RUFY1-201ENST00000319449 APBB1IPQ7Z5R6 666 aaPredicted RBP22.67■■□□□ 1.22
RUFY1-201ENST00000319449 AGGF1Q8N302 714 aaeCLIP22.67■■□□□ 1.22
RUFY1-201ENST00000319449 PRELID2Q8N945 189 aa22.67■■□□□ 1.22
RUFY1-201ENST00000319449 CTNNBL1Q8WYA6 563 aaPredicted RBP22.67■■□□□ 1.22
RUFY1-201ENST00000319449 TRIM4Q9C037 500 aa22.67■■□□□ 1.22
RUFY1-201ENST00000319449 ZNF277Q9NRM2 450 aaPredicted RBP22.67■■□□□ 1.22
RUFY1-201ENST00000319449 PCYOX1Q9UHG3 505 aa22.67■■□□□ 1.22
RUFY1-201ENST00000319449 ACSL3O95573 720 aa22.66■■□□□ 1.22
RUFY1-201ENST00000319449 PYGBP11216 843 aa22.66■■□□□ 1.22
RUFY1-201ENST00000319449 TARSP26639 723 aaKnown RBP22.66■■□□□ 1.22
RUFY1-201ENST00000319449 ATP5DP30049 168 aa22.66■■□□□ 1.22
RUFY1-201ENST00000319449 TTC27Q6P3X3 843 aa22.66■■□□□ 1.22
RUFY1-201ENST00000319449 GLYCTKQ8IVS8 523 aa22.66■■□□□ 1.22
RUFY1-201ENST00000319449 ENDOVQ8N8Q3 282 aaKnown RBP22.66■■□□□ 1.22
RUFY1-201ENST00000319449 ERP27Q96DN0 273 aa22.66■■□□□ 1.22
RUFY1-201ENST00000319449 SERPINB12Q96P63 405 aa22.66■■□□□ 1.22
RUFY1-201ENST00000319449 RTFDC1Q9BY42 306 aaPredicted RBP22.66■■□□□ 1.22
RUFY1-201ENST00000319449 USP40Q9NVE5 1235 aa22.66■■□□□ 1.22
RUFY1-201ENST00000319449 RNF8O76064 485 aa22.66■■□□□ 1.22
RUFY1-201ENST00000319449 LDHBP07195 334 aaKnown RBP22.66■■□□□ 1.22
RUFY1-201ENST00000319449 TMEM253P0C7T8 217 aa22.66■■□□□ 1.22
RUFY1-201ENST00000319449 XRCC5P13010 732 aaKnown RBP22.66■■□□□ 1.22
RUFY1-201ENST00000319449 CCDC137Q6PK04 289 aaKnown RBP22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms