RNA–Protein interactions for RNA: ENST00000319420.3

SHISA2-201, Transcript of shisa family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA2, Length 2,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2-201ENST00000319420 EPC2Q52LR7 807 aa17.26■□□□□ 0.35
SHISA2-201ENST00000319420 ZBTB41Q5SVQ8 909 aa17.26■□□□□ 0.35
SHISA2-201ENST00000319420 TAS1R3Q7RTX0 852 aa17.26■□□□□ 0.35
SHISA2-201ENST00000319420 MAP4K3Q8IVH8 894 aa17.26■□□□□ 0.35
SHISA2-201ENST00000319420 MCPH1Q8NEM0 835 aa17.26■□□□□ 0.35
SHISA2-201ENST00000319420 DEPTORQ8TB45 409 aa17.26■□□□□ 0.35
SHISA2-201ENST00000319420 IWS1Q96ST2 819 aa17.26■□□□□ 0.35
SHISA2-201ENST00000319420 MMP19Q99542 508 aa17.26■□□□□ 0.35
SHISA2-201ENST00000319420 GPR88Q9GZN0 384 aa17.26■□□□□ 0.35
SHISA2-201ENST00000319420 FBXO40Q9UH90 709 aa17.26■□□□□ 0.35
SHISA2-201ENST00000319420 AGTPBP1Q9UPW5 1226 aa17.26■□□□□ 0.35
SHISA2-201ENST00000319420 ATP8B1O43520 1251 aa17.26■□□□□ 0.35
SHISA2-201ENST00000319420 OAS2P29728 719 aaKnown RBP17.26■□□□□ 0.35
SHISA2-201ENST00000319420 SLC9A9Q8IVB4 645 aa17.26■□□□□ 0.35
SHISA2-201ENST00000319420 PCYT2Q99447 389 aa17.26■□□□□ 0.35
SHISA2-201ENST00000319420 TCHPQ9BT92 498 aa17.26■□□□□ 0.35
SHISA2-201ENST00000319420 GRID2IPA4D2P6 1211 aa17.26■□□□□ 0.35
SHISA2-201ENST00000319420 TTLL13PA6NNM8 815 aa17.26■□□□□ 0.35
SHISA2-201ENST00000319420 LRRIQ3A6PVS8 624 aaPredicted RBP17.26■□□□□ 0.35
SHISA2-201ENST00000319420 TNNI1P19237 187 aa17.26■□□□□ 0.35
SHISA2-201ENST00000319420 TNFAIP3P21580 790 aa17.26■□□□□ 0.35
SHISA2-201ENST00000319420 GALCP54803 685 aa17.26■□□□□ 0.35
SHISA2-201ENST00000319420 WNT7BP56706 349 aa17.26■□□□□ 0.35
SHISA2-201ENST00000319420 GABPB1Q06547 395 aaPredicted RBP17.26■□□□□ 0.35
SHISA2-201ENST00000319420 PHLDB2Q86SQ0 1253 aa17.26■□□□□ 0.35
SHISA2-201ENST00000319420 ZBTB33Q86T24 672 aa17.26■□□□□ 0.35
SHISA2-201ENST00000319420 GTPBP10A4D1E9 387 aaKnown RBP17.25■□□□□ 0.35
SHISA2-201ENST00000319420 K7ERI5 159 aa17.25■□□□□ 0.35
SHISA2-201ENST00000319420 KCNK3O14649 394 aa17.25■□□□□ 0.35
SHISA2-201ENST00000319420 CYP26A1O43174 497 aa17.25■□□□□ 0.35
SHISA2-201ENST00000319420 H2AFZP0C0S5 128 aa17.25■□□□□ 0.35
SHISA2-201ENST00000319420 MYBL2P10244 700 aa17.25■□□□□ 0.35
SHISA2-201ENST00000319420 FERP16591 822 aa17.25■□□□□ 0.35
SHISA2-201ENST00000319420 ALCAMQ13740 583 aa17.25■□□□□ 0.35
SHISA2-201ENST00000319420 H2AFVQ71UI9 128 aa17.25■□□□□ 0.35
SHISA2-201ENST00000319420 RDM1Q8NG50 284 aa17.25■□□□□ 0.35
SHISA2-201ENST00000319420 LMO3Q8TAP4 145 aa17.25■□□□□ 0.35
SHISA2-201ENST00000319420 AZI2Q9H6S1 392 aa17.25■□□□□ 0.35
SHISA2-201ENST00000319420 PDE11AQ9HCR9 933 aa17.25■□□□□ 0.35
SHISA2-201ENST00000319420 MYPNQ86TC9 1320 aa17.25■□□□□ 0.35
SHISA2-201ENST00000319420 TMEM110-MUSTN1A8MSY1 372 aa17.25■□□□□ 0.35
SHISA2-201ENST00000319420 ATMINO43313 823 aaPredicted RBP17.25■□□□□ 0.35
SHISA2-201ENST00000319420 N4BP1O75113 896 aaKnown RBP17.25■□□□□ 0.35
SHISA2-201ENST00000319420 GLRA2P23416 452 aa17.25■□□□□ 0.35
SHISA2-201ENST00000319420 TNNT3P45378 269 aaPredicted RBP17.25■□□□□ 0.35
SHISA2-201ENST00000319420 STRN3Q13033 797 aa17.25■□□□□ 0.35
SHISA2-201ENST00000319420 BIRC3Q13489 604 aa17.25■□□□□ 0.35
SHISA2-201ENST00000319420 ARMC9Q7Z3E5 817 aa17.25■□□□□ 0.35
SHISA2-201ENST00000319420 METTL13Q8N6R0 699 aa17.25■□□□□ 0.35
SHISA2-201ENST00000319420 PARD3BQ8TEW8 1205 aa17.25■□□□□ 0.35
SHISA2-201ENST00000319420 TATDN2Q93075 761 aa17.25■□□□□ 0.35
SHISA2-201ENST00000319420 SENP7Q9BQF6 1050 aa17.25■□□□□ 0.35
SHISA2-201ENST00000319420 TAF1DQ9H5J8 278 aaPredicted RBP17.25■□□□□ 0.35
SHISA2-201ENST00000319420 DKC1O60832 514 aaKnown RBP eCLIP17.24■□□□□ 0.35
SHISA2-201ENST00000319420 KRT5P13647 590 aa17.24■□□□□ 0.35
SHISA2-201ENST00000319420 NLRP11P59045 1033 aaKnown RBP17.24■□□□□ 0.35
SHISA2-201ENST00000319420 OSTNP61366 133 aa17.24■□□□□ 0.35
SHISA2-201ENST00000319420 LLGL1Q15334 1064 aa17.24■□□□□ 0.35
SHISA2-201ENST00000319420 DAAM2Q86T65 1068 aa17.24■□□□□ 0.35
SHISA2-201ENST00000319420 SPATA33Q96N06 139 aa17.24■□□□□ 0.35
SHISA2-201ENST00000319420 BZW2Q9Y6E2 419 aaKnown RBP17.24■□□□□ 0.35
SHISA2-201ENST00000319420 SBF1O95248 1867 aa17.24■□□□□ 0.35
SHISA2-201ENST00000319420 NFASCO94856 1347 aa17.24■□□□□ 0.35
SHISA2-201ENST00000319420 SGPL1O95470 568 aa17.24■□□□□ 0.35
SHISA2-201ENST00000319420 CKAP4Q07065 602 aaKnown RBP17.24■□□□□ 0.35
SHISA2-201ENST00000319420 NFIL3Q16649 462 aa17.24■□□□□ 0.35
SHISA2-201ENST00000319420 SPOPLQ6IQ16 392 aa17.24■□□□□ 0.35
SHISA2-201ENST00000319420 SLC47A2Q86VL8 602 aa17.24■□□□□ 0.35
SHISA2-201ENST00000319420 LRRC1Q9BTT6 524 aa17.24■□□□□ 0.35
SHISA2-201ENST00000319420 IGSF9BQ9UPX0 1349 aa17.24■□□□□ 0.35
SHISA2-201ENST00000319420 PARP14Q460N5 1801 aa17.24■□□□□ 0.35
SHISA2-201ENST00000319420 EDN1P05305 212 aa17.23■□□□□ 0.35
SHISA2-201ENST00000319420 TUBB4BP68371 445 aa17.23■□□□□ 0.35
SHISA2-201ENST00000319420 SCARA3Q6AZY7 606 aa17.23■□□□□ 0.35
SHISA2-201ENST00000319420 WDR93Q6P2C0 686 aa17.23■□□□□ 0.35
SHISA2-201ENST00000319420 USP50Q70EL3 339 aaPredicted RBP17.23■□□□□ 0.35
SHISA2-201ENST00000319420 SV2AQ7L0J3 742 aa17.23■□□□□ 0.35
SHISA2-201ENST00000319420 ADAT2Q7Z6V5 191 aaKnown RBP17.23■□□□□ 0.35
SHISA2-201ENST00000319420 SPATA4Q8NEY3 305 aa17.23■□□□□ 0.35
SHISA2-201ENST00000319420 THAP2Q9H0W7 228 aa17.23■□□□□ 0.35
SHISA2-201ENST00000319420 TRPC6Q9Y210 931 aa17.23■□□□□ 0.35
SHISA2-201ENST00000319420 MAFBQ9Y5Q3 323 aaPredicted RBP17.23■□□□□ 0.35
SHISA2-201ENST00000319420 CXCL11O14625 94 aa17.23■□□□□ 0.35
SHISA2-201ENST00000319420 ERLIN1O75477 346 aa17.23■□□□□ 0.35
SHISA2-201ENST00000319420 TXNP10599 105 aaKnown RBP17.23■□□□□ 0.35
SHISA2-201ENST00000319420 PAFAH1B1P43034 410 aa17.23■□□□□ 0.35
SHISA2-201ENST00000319420 TMEM132AQ24JP5 1023 aa17.23■□□□□ 0.35
SHISA2-201ENST00000319420 C2CD6Q53TS8 623 aa17.23■□□□□ 0.35
SHISA2-201ENST00000319420 PRPF31Q8WWY3 499 aaKnown RBP17.23■□□□□ 0.35
SHISA2-201ENST00000319420 ARHGEF26Q96DR7 871 aa17.23■□□□□ 0.35
SHISA2-201ENST00000319420 NLRP4Q96MN2 994 aa17.23■□□□□ 0.35
SHISA2-201ENST00000319420 FNBP1Q96RU3 617 aa17.23■□□□□ 0.35
SHISA2-201ENST00000319420 RBM12Q9NTZ6 932 aaKnown RBP17.23■□□□□ 0.35
SHISA2-201ENST00000319420 STAM2O75886 525 aa17.22■□□□□ 0.35
SHISA2-201ENST00000319420 PRPF4BQ13523 1007 aaKnown RBP17.22■□□□□ 0.35
SHISA2-201ENST00000319420 CASP8Q14790 479 aa17.22■□□□□ 0.35
SHISA2-201ENST00000319420 HDXQ7Z353 690 aa17.22■□□□□ 0.35
SHISA2-201ENST00000319420 RPUSD2Q8IZ73 545 aaKnown RBP17.22■□□□□ 0.35
SHISA2-201ENST00000319420 SEPT1Q8WYJ6 367 aa17.22■□□□□ 0.35
SHISA2-201ENST00000319420 DMGDHQ9UI17 866 aaKnown RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms