RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 FAM114A2Q9NRY5 505 aa10.34□□□□□ -0.75
RPGR-201ENST00000318842 ATXN2Q99700 1313 aaKnown RBP10.34□□□□□ -0.75
RPGR-201ENST00000318842 PI4K2BG5E9Z4 385 aa10.34□□□□□ -0.75
RPGR-201ENST00000318842 MEIS2O14770 477 aa10.34□□□□□ -0.75
RPGR-201ENST00000318842 BRAFP15056 766 aa10.34□□□□□ -0.75
RPGR-201ENST00000318842 ZNF76P36508 570 aa10.34□□□□□ -0.75
RPGR-201ENST00000318842 PLCB4Q15147 1175 aa10.34□□□□□ -0.75
RPGR-201ENST00000318842 ANKRD20A2Q5SQ80 823 aa10.34□□□□□ -0.75
RPGR-201ENST00000318842 ANKRD20A1Q5TYW2 823 aa10.34□□□□□ -0.75
RPGR-201ENST00000318842 ANKRD20A3Q5VUR7 823 aa10.34□□□□□ -0.75
RPGR-201ENST00000318842 PASD1Q8IV76 773 aa10.34□□□□□ -0.75
RPGR-201ENST00000318842 CERS5Q8N5B7 392 aa10.34□□□□□ -0.75
RPGR-201ENST00000318842 SPDYE1Q8NFV5 336 aaPredicted RBP10.34□□□□□ -0.75
RPGR-201ENST00000318842 SAAL1Q96ER3 474 aa10.34□□□□□ -0.75
RPGR-201ENST00000318842 GRID1Q9ULK0 1009 aa10.34□□□□□ -0.75
RPGR-201ENST00000318842 BRCA2P51587 3418 aa10.34□□□□□ -0.75
RPGR-201ENST00000318842 SCN7AQ01118 1682 aa10.34□□□□□ -0.75
RPGR-201ENST00000318842 POC1B-GALNT4F8VUJ3 575 aa10.33□□□□□ -0.76
RPGR-201ENST00000318842 EXOC3O60645 756 aa10.33□□□□□ -0.76
RPGR-201ENST00000318842 CFBP00751 764 aa10.33□□□□□ -0.76
RPGR-201ENST00000318842 PAEPP09466 180 aa10.33□□□□□ -0.76
RPGR-201ENST00000318842 FGFR1P11362 822 aa10.33□□□□□ -0.76
RPGR-201ENST00000318842 EPHB2P29323 1055 aa10.33□□□□□ -0.76
RPGR-201ENST00000318842 NRLP54845 237 aa10.33□□□□□ -0.76
RPGR-201ENST00000318842 INHBEP58166 350 aa10.33□□□□□ -0.76
RPGR-201ENST00000318842 KRT17Q04695 432 aa10.33□□□□□ -0.76
RPGR-201ENST00000318842 GAD2Q05329 585 aa10.33□□□□□ -0.76
RPGR-201ENST00000318842 PSMD2Q13200 908 aa10.33□□□□□ -0.76
RPGR-201ENST00000318842 MTMR2Q13614 643 aa10.33□□□□□ -0.76
RPGR-201ENST00000318842 SEPT2Q15019 361 aa10.33□□□□□ -0.76
RPGR-201ENST00000318842 KAZNQ674X7 775 aa10.33□□□□□ -0.76
RPGR-201ENST00000318842 RFWD3Q6PCD5 774 aa10.33□□□□□ -0.76
RPGR-201ENST00000318842 CCDC174Q6PII3 467 aa10.33□□□□□ -0.76
RPGR-201ENST00000318842 PPM1KQ8N3J5 372 aa10.33□□□□□ -0.76
RPGR-201ENST00000318842 PLEKHO2Q8TD55 490 aa10.33□□□□□ -0.76
RPGR-201ENST00000318842 RUBCNQ92622 972 aa10.33□□□□□ -0.76
RPGR-201ENST00000318842 ARHGEF1Q92888 912 aaKnown RBP10.33□□□□□ -0.76
RPGR-201ENST00000318842 ERP27Q96DN0 273 aa10.33□□□□□ -0.76
RPGR-201ENST00000318842 RSRC1Q96IZ7 334 aaKnown RBP10.33□□□□□ -0.76
RPGR-201ENST00000318842 EIF2AK1Q9BQI3 630 aaKnown RBP10.33□□□□□ -0.76
RPGR-201ENST00000318842 SLITRK6Q9H5Y7 841 aa10.33□□□□□ -0.76
RPGR-201ENST00000318842 DCTN4Q9UJW0 460 aa10.33□□□□□ -0.76
RPGR-201ENST00000318842 AFF2P51816 1311 aa10.33□□□□□ -0.76
RPGR-201ENST00000318842 EMSYQ7Z589 1322 aa10.33□□□□□ -0.76
RPGR-201ENST00000318842 CCDC188H7C350 402 aa10.33□□□□□ -0.76
RPGR-201ENST00000318842 ZBTB5O15062 677 aa10.33□□□□□ -0.76
RPGR-201ENST00000318842 FAM13AO94988 1023 aa10.33□□□□□ -0.76
RPGR-201ENST00000318842 CFHP08603 1231 aa10.33□□□□□ -0.76
RPGR-201ENST00000318842 EEF2P13639 858 aaKnown RBP10.33□□□□□ -0.76
RPGR-201ENST00000318842 ATP13A4Q4VNC1 1196 aa10.33□□□□□ -0.76
RPGR-201ENST00000318842 COBLL1Q53SF7 1204 aa10.33□□□□□ -0.76
RPGR-201ENST00000318842 RINT1Q6NUQ1 792 aa10.33□□□□□ -0.76
RPGR-201ENST00000318842 NOP9Q86U38 636 aaKnown RBP10.33□□□□□ -0.76
RPGR-201ENST00000318842 VPS36Q86VN1 386 aa10.33□□□□□ -0.76
RPGR-201ENST00000318842 HOOK3Q86VS8 718 aa10.33□□□□□ -0.76
RPGR-201ENST00000318842 SYCP3Q8IZU3 236 aa10.33□□□□□ -0.76
RPGR-201ENST00000318842 DTX3LQ8TDB6 740 aa10.33□□□□□ -0.76
RPGR-201ENST00000318842 UCMAQ8WVF2 138 aa10.33□□□□□ -0.76
RPGR-201ENST00000318842 LENG9Q96B70 501 aa10.33□□□□□ -0.76
RPGR-201ENST00000318842 MYLK2Q9H1R3 596 aa10.33□□□□□ -0.76
RPGR-201ENST00000318842 DNAJC18Q9H819 358 aa10.33□□□□□ -0.76
RPGR-201ENST00000318842 USTQ9Y2C2 406 aa10.33□□□□□ -0.76
RPGR-201ENST00000318842 RABGAP1Q9Y3P9 1069 aa10.33□□□□□ -0.76
RPGR-201ENST00000318842 USP15Q9Y4E8 981 aaPredicted RBP10.33□□□□□ -0.76
RPGR-201ENST00000318842 A0A1B0GUA9 196 aa10.33□□□□□ -0.76
RPGR-201ENST00000318842 MSH2P43246 934 aa10.33□□□□□ -0.76
RPGR-201ENST00000318842 CLK2P49760 499 aaKnown RBP10.33□□□□□ -0.76
RPGR-201ENST00000318842 MYL7Q01449 175 aa10.33□□□□□ -0.76
RPGR-201ENST00000318842 ADCY2Q08462 1091 aa10.33□□□□□ -0.76
RPGR-201ENST00000318842 TAF11Q15544 211 aa10.33□□□□□ -0.76
RPGR-201ENST00000318842 MDH1BQ5I0G3 518 aa10.33□□□□□ -0.76
RPGR-201ENST00000318842 ODR4Q5SWX8 454 aa10.33□□□□□ -0.76
RPGR-201ENST00000318842 PHC3Q8NDX5 983 aa10.33□□□□□ -0.76
RPGR-201ENST00000318842 WDR66Q8TBY9 1149 aa10.33□□□□□ -0.76
RPGR-201ENST00000318842 CALR3Q96L12 384 aaKnown RBP10.33□□□□□ -0.76
RPGR-201ENST00000318842 RAB17Q9H0T7 212 aa10.33□□□□□ -0.76
RPGR-201ENST00000318842 NUCKS1Q9H1E3 243 aaKnown RBP10.33□□□□□ -0.76
RPGR-201ENST00000318842 KAT6AQ92794 2004 aa10.32□□□□□ -0.76
RPGR-201ENST00000318842 PHLPP1O60346 1717 aa10.32□□□□□ -0.76
RPGR-201ENST00000318842 GOLGA6L10A0A0M3HER8 536 aa10.32□□□□□ -0.76
RPGR-201ENST00000318842 TCF4P15884 667 aa10.32□□□□□ -0.76
RPGR-201ENST00000318842 SHMT1P34896 483 aa10.32□□□□□ -0.76
RPGR-201ENST00000318842 RBM5P52756 815 aaKnown RBP eCLIP10.32□□□□□ -0.76
RPGR-201ENST00000318842 MRPL12P52815 198 aaKnown RBP10.32□□□□□ -0.76
RPGR-201ENST00000318842 ITGA8P53708 1063 aa10.32□□□□□ -0.76
RPGR-201ENST00000318842 EFTUD2Q15029 972 aaKnown RBP eCLIP10.32□□□□□ -0.76
RPGR-201ENST00000318842 RNF207Q6ZRF8 634 aa10.32□□□□□ -0.76
RPGR-201ENST00000318842 CCDC50Q8IVM0 306 aa10.32□□□□□ -0.76
RPGR-201ENST00000318842 ETNPPLQ8TBG4 499 aa10.32□□□□□ -0.76
RPGR-201ENST00000318842 DDX50Q9BQ39 737 aaKnown RBP10.32□□□□□ -0.76
RPGR-201ENST00000318842 NUP85Q9BW27 656 aa10.32□□□□□ -0.76
RPGR-201ENST00000318842 KCNMB3Q9NPA1 279 aa10.32□□□□□ -0.76
RPGR-201ENST00000318842 NENFQ9UMX5 172 aa10.32□□□□□ -0.76
RPGR-201ENST00000318842 PCDHA3Q9Y5H8 950 aa10.32□□□□□ -0.76
RPGR-201ENST00000318842 IRS2Q9Y4H2 1338 aa10.32□□□□□ -0.76
RPGR-201ENST00000318842 CCDC169A6NNP5 214 aa10.32□□□□□ -0.76
RPGR-201ENST00000318842 BHMG1C9JSJ3 638 aaPredicted RBP10.32□□□□□ -0.76
RPGR-201ENST00000318842 STX2P32856 288 aa10.32□□□□□ -0.76
RPGR-201ENST00000318842 PPP1R2P41236 205 aa10.32□□□□□ -0.76
RPGR-201ENST00000318842 COPS2P61201 443 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms