RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 TMEM119Q4V9L6 283 aa7.12□□□□□ -1.27
ZNF540-201ENST00000316433 LRRC8BQ6P9F7 803 aa7.12□□□□□ -1.27
ZNF540-201ENST00000316433 LDHAL6AQ6ZMR3 332 aa7.12□□□□□ -1.27
ZNF540-201ENST00000316433 CAPN12Q6ZSI9 719 aa7.12□□□□□ -1.27
ZNF540-201ENST00000316433 MARK2Q7KZI7 788 aaKnown RBP7.12□□□□□ -1.27
ZNF540-201ENST00000316433 RIBC1Q8N443 379 aaPredicted RBP7.12□□□□□ -1.27
ZNF540-201ENST00000316433 SUPT20HQ8NEM7 779 aa7.12□□□□□ -1.27
ZNF540-201ENST00000316433 NKX2-3Q8TAU0 364 aa7.12□□□□□ -1.27
ZNF540-201ENST00000316433 FNDC8Q8TC99 324 aa7.12□□□□□ -1.27
ZNF540-201ENST00000316433 SH3TC2Q8TF17 1288 aa7.12□□□□□ -1.27
ZNF540-201ENST00000316433 GFM2Q969S9 779 aaKnown RBP7.12□□□□□ -1.27
ZNF540-201ENST00000316433 UTP4Q969X6 686 aaKnown RBP7.12□□□□□ -1.27
ZNF540-201ENST00000316433 TANGO6Q9C0B7 1094 aa7.12□□□□□ -1.27
ZNF540-201ENST00000316433 EPB41L5Q9HCM4 733 aa7.12□□□□□ -1.27
ZNF540-201ENST00000316433 TMOD3Q9NYL9 352 aa7.12□□□□□ -1.27
ZNF540-201ENST00000316433 PTTG2Q9NZH5 202 aa7.12□□□□□ -1.27
ZNF540-201ENST00000316433 PNMA2Q9UL42 364 aa7.12□□□□□ -1.27
ZNF540-201ENST00000316433 BTAF1O14981 1849 aa7.12□□□□□ -1.27
ZNF540-201ENST00000316433 TRIM64CA6NLI5 447 aa7.12□□□□□ -1.27
ZNF540-201ENST00000316433 SPECC1L-ADORA2AF8WAN1 911 aa7.12□□□□□ -1.27
ZNF540-201ENST00000316433 H0Y3Z8 333 aa7.12□□□□□ -1.27
ZNF540-201ENST00000316433 WNT7AO00755 349 aa7.12□□□□□ -1.27
ZNF540-201ENST00000316433 BBOX1O75936 387 aa7.12□□□□□ -1.27
ZNF540-201ENST00000316433 CAMTA2O94983 1202 aa7.12□□□□□ -1.27
ZNF540-201ENST00000316433 HEXIM1O94992 359 aaKnown RBP7.12□□□□□ -1.27
ZNF540-201ENST00000316433 UBTFL6P0CB48 400 aaPredicted RBP7.12□□□□□ -1.27
ZNF540-201ENST00000316433 PLCG2P16885 1265 aa7.12□□□□□ -1.27
ZNF540-201ENST00000316433 GM2AP17900 193 aa7.12□□□□□ -1.27
ZNF540-201ENST00000316433 HSD17B3P37058 310 aa7.12□□□□□ -1.27
ZNF540-201ENST00000316433 TXKP42681 527 aa7.12□□□□□ -1.27
ZNF540-201ENST00000316433 TMED10P49755 219 aaKnown RBP7.12□□□□□ -1.27
ZNF540-201ENST00000316433 ADRM1Q16186 407 aa7.12□□□□□ -1.27
ZNF540-201ENST00000316433 PPP2R5EQ16537 467 aa7.12□□□□□ -1.27
ZNF540-201ENST00000316433 SHROOM1Q2M3G4 852 aaPredicted RBP7.12□□□□□ -1.27
ZNF540-201ENST00000316433 ZCWPW2Q504Y3 356 aa7.12□□□□□ -1.27
ZNF540-201ENST00000316433 DEPDC1Q5TB30 811 aa7.12□□□□□ -1.27
ZNF540-201ENST00000316433 TMEM214Q6NUQ4 689 aaKnown RBP7.12□□□□□ -1.27
ZNF540-201ENST00000316433 KRT25Q7Z3Z0 450 aa7.12□□□□□ -1.27
ZNF540-201ENST00000316433 ZNF280CQ8ND82 737 aa7.12□□□□□ -1.27
ZNF540-201ENST00000316433 OR2W6PQ8NHA6 318 aa7.12□□□□□ -1.27
ZNF540-201ENST00000316433 MDM1Q8TC05 714 aa7.12□□□□□ -1.27
ZNF540-201ENST00000316433 DNAJC1Q96KC8 554 aaKnown RBP7.12□□□□□ -1.27
ZNF540-201ENST00000316433 CCDC134Q9H6E4 229 aa7.12□□□□□ -1.27
ZNF540-201ENST00000316433 TUT1Q9H6E5 874 aaKnown RBP7.12□□□□□ -1.27
ZNF540-201ENST00000316433 CLK4Q9HAZ1 481 aaKnown RBP7.12□□□□□ -1.27
ZNF540-201ENST00000316433 TRPC7Q9HCX4 862 aa7.12□□□□□ -1.27
ZNF540-201ENST00000316433 AASDHPPTQ9NRN7 309 aa7.12□□□□□ -1.27
ZNF540-201ENST00000316433 UBR3Q6ZT12 1888 aa7.11□□□□□ -1.27
ZNF540-201ENST00000316433 ESYT3A0FGR9 886 aa7.11□□□□□ -1.27
ZNF540-201ENST00000316433 TTC34A8MYJ7 566 aa7.11□□□□□ -1.27
ZNF540-201ENST00000316433 MATN2O00339 956 aa7.11□□□□□ -1.27
ZNF540-201ENST00000316433 FBP2O00757 339 aa7.11□□□□□ -1.27
ZNF540-201ENST00000316433 PSMA7O14818 248 aa7.11□□□□□ -1.27
ZNF540-201ENST00000316433 TBCAO75347 108 aaKnown RBP7.11□□□□□ -1.27
ZNF540-201ENST00000316433 LMNAP02545 664 aaKnown RBP7.11□□□□□ -1.27
ZNF540-201ENST00000316433 ZCCHC18P0CG32 403 aa7.11□□□□□ -1.27
ZNF540-201ENST00000316433 RASA1P20936 1047 aa7.11□□□□□ -1.27
ZNF540-201ENST00000316433 BDNFP23560 247 aa7.11□□□□□ -1.27
ZNF540-201ENST00000316433 GUCY1A2P33402 732 aa7.11□□□□□ -1.27
ZNF540-201ENST00000316433 CTNNA1P35221 906 aaKnown RBP7.11□□□□□ -1.27
ZNF540-201ENST00000316433 TUBA1BP68363 451 aa7.11□□□□□ -1.27
ZNF540-201ENST00000316433 IL17AQ16552 155 aa7.11□□□□□ -1.27
ZNF540-201ENST00000316433 OTUD7BQ6GQQ9 843 aa7.11□□□□□ -1.27
ZNF540-201ENST00000316433 TUBA1AQ71U36 451 aa7.11□□□□□ -1.27
ZNF540-201ENST00000316433 CROCCP2Q86T23 111 aa7.11□□□□□ -1.27
ZNF540-201ENST00000316433 TTC30BQ8N4P2 665 aa7.11□□□□□ -1.27
ZNF540-201ENST00000316433 CCDC82Q8N4S0 544 aa7.11□□□□□ -1.27
ZNF540-201ENST00000316433 GABPB2Q8TAK5 448 aaPredicted RBP7.11□□□□□ -1.27
ZNF540-201ENST00000316433 TRPC4APQ8TEL6 797 aa7.11□□□□□ -1.27
ZNF540-201ENST00000316433 VTI1AQ96AJ9 217 aa7.11□□□□□ -1.27
ZNF540-201ENST00000316433 ZNF594Q96JF6 807 aaPredicted RBP7.11□□□□□ -1.27
ZNF540-201ENST00000316433 SPATA17Q96L03 361 aa7.11□□□□□ -1.27
ZNF540-201ENST00000316433 UIMC1Q96RL1 719 aa7.11□□□□□ -1.27
ZNF540-201ENST00000316433 DDX50Q9BQ39 737 aaKnown RBP7.11□□□□□ -1.27
ZNF540-201ENST00000316433 TMEM109Q9BVC6 243 aa7.11□□□□□ -1.27
ZNF540-201ENST00000316433 TIMMDC1Q9NPL8 285 aa7.11□□□□□ -1.27
ZNF540-201ENST00000316433 PNMA3Q9UL41 463 aa7.11□□□□□ -1.27
ZNF540-201ENST00000316433 TFR2Q9UP52 801 aa7.11□□□□□ -1.27
ZNF540-201ENST00000316433 NOX1Q9Y5S8 564 aa7.11□□□□□ -1.27
ZNF540-201ENST00000316433 SIP14410 1827 aa7.11□□□□□ -1.27
ZNF540-201ENST00000316433 GTPBP10A4D1E9 387 aaKnown RBP7.11□□□□□ -1.27
ZNF540-201ENST00000316433 DCDC2CA8MYV0 355 aa7.11□□□□□ -1.27
ZNF540-201ENST00000316433 FOXN1O15353 648 aa7.11□□□□□ -1.27
ZNF540-201ENST00000316433 SNX3O60493 162 aa7.11□□□□□ -1.27
ZNF540-201ENST00000316433 ADAMTS2O95450 1211 aa7.11□□□□□ -1.27
ZNF540-201ENST00000316433 OAS1P00973 400 aaKnown RBP7.11□□□□□ -1.27
ZNF540-201ENST00000316433 CDK4P11802 303 aa7.11□□□□□ -1.27
ZNF540-201ENST00000316433 MUTP22033 750 aa7.11□□□□□ -1.27
ZNF540-201ENST00000316433 TKTP29401 623 aaKnown RBP7.11□□□□□ -1.27
ZNF540-201ENST00000316433 AMPD3Q01432 767 aa7.11□□□□□ -1.27
ZNF540-201ENST00000316433 FKBP4Q02790 459 aaKnown RBP eCLIP7.11□□□□□ -1.27
ZNF540-201ENST00000316433 RELAQ04206 551 aa7.11□□□□□ -1.27
ZNF540-201ENST00000316433 WASHC2DQ5SRD0 308 aa7.11□□□□□ -1.27
ZNF540-201ENST00000316433 PPFIBP2Q8ND30 876 aa7.11□□□□□ -1.27
ZNF540-201ENST00000316433 LRRC8CQ8TDW0 803 aa7.11□□□□□ -1.27
ZNF540-201ENST00000316433 GIMAP1Q8WWP7 306 aa7.11□□□□□ -1.27
ZNF540-201ENST00000316433 GAB3Q8WWW8 586 aa7.11□□□□□ -1.27
ZNF540-201ENST00000316433 SCG3Q8WXD2 468 aaKnown RBP7.11□□□□□ -1.27
ZNF540-201ENST00000316433 NUP88Q99567 741 aaPredicted RBP7.11□□□□□ -1.27
ZNF540-201ENST00000316433 CHP1Q99653 195 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms