RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 MGAT2Q10469 447 aa5.01□□□□□ -1.61
SMCO3-201ENST00000316048 MORC3Q14149 939 aa5.01□□□□□ -1.61
SMCO3-201ENST00000316048 ANO6Q4KMQ2 910 aa5.01□□□□□ -1.61
SMCO3-201ENST00000316048 FAM83BQ5T0W9 1011 aa5.01□□□□□ -1.61
SMCO3-201ENST00000316048 ERAP2Q6P179 960 aa5.01□□□□□ -1.61
SMCO3-201ENST00000316048 Q6ZVL8 140 aa5.01□□□□□ -1.61
SMCO3-201ENST00000316048 MIGA2Q7L4E1 593 aa5.01□□□□□ -1.61
SMCO3-201ENST00000316048 GLB1L2Q8IW92 636 aa5.01□□□□□ -1.61
SMCO3-201ENST00000316048 RSAD2Q8WXG1 361 aa5.01□□□□□ -1.61
SMCO3-201ENST00000316048 HOXB13Q92826 284 aaPredicted RBP5.01□□□□□ -1.61
SMCO3-201ENST00000316048 HDAC10Q969S8 669 aa5.01□□□□□ -1.61
SMCO3-201ENST00000316048 RGMAQ96B86 450 aa5.01□□□□□ -1.61
SMCO3-201ENST00000316048 RTEL1Q9NZ71 1219 aa5.01□□□□□ -1.61
SMCO3-201ENST00000316048 CROTQ9UKG9 612 aa5.01□□□□□ -1.61
SMCO3-201ENST00000316048 DMTF1Q9Y222 760 aa5.01□□□□□ -1.61
SMCO3-201ENST00000316048 SIK3Q9Y2K2 1263 aa5.01□□□□□ -1.61
SMCO3-201ENST00000316048 STXBP5LQ9Y2K9 1186 aa5.01□□□□□ -1.61
SMCO3-201ENST00000316048 NUP160Q12769 1436 aa5.01□□□□□ -1.61
SMCO3-201ENST00000316048 KIAA0556O60303 1618 aa5□□□□□ -1.61
SMCO3-201ENST00000316048 LY86O95711 162 aa5□□□□□ -1.61
SMCO3-201ENST00000316048 NCAM1P13591 858 aa5□□□□□ -1.61
SMCO3-201ENST00000316048 ADSLP30566 484 aaPredicted RBP5□□□□□ -1.61
SMCO3-201ENST00000316048 GPR15P49685 360 aa5□□□□□ -1.61
SMCO3-201ENST00000316048 RAB1AP62820 205 aa5□□□□□ -1.61
SMCO3-201ENST00000316048 SRSF3P84103 164 aaKnown RBP5□□□□□ -1.61
SMCO3-201ENST00000316048 TMEM62Q0P6H9 643 aa5□□□□□ -1.61
SMCO3-201ENST00000316048 DGKDQ16760 1214 aa5□□□□□ -1.61
SMCO3-201ENST00000316048 RNF220Q5VTB9 566 aa5□□□□□ -1.61
SMCO3-201ENST00000316048 GRAMD4Q6IC98 578 aa5□□□□□ -1.61
SMCO3-201ENST00000316048 MSL3Q8N5Y2 521 aaKnown RBP5□□□□□ -1.61
SMCO3-201ENST00000316048 CELF5Q8N6W0 485 aaKnown RBP5□□□□□ -1.61
SMCO3-201ENST00000316048 PIK3C3Q8NEB9 887 aa5□□□□□ -1.61
SMCO3-201ENST00000316048 KLHDC4Q8TBB5 520 aa5□□□□□ -1.61
SMCO3-201ENST00000316048 CPA5Q8WXQ8 436 aa5□□□□□ -1.61
SMCO3-201ENST00000316048 ATP6V0A4Q9HBG4 840 aa5□□□□□ -1.61
SMCO3-201ENST00000316048 POLR3BQ9NW08 1133 aaPredicted RBP5□□□□□ -1.61
SMCO3-201ENST00000316048 EPRSP07814 1512 aaKnown RBP5□□□□□ -1.61
SMCO3-201ENST00000316048 EHBP1L1Q8N3D4 1523 aa5□□□□□ -1.61
SMCO3-201ENST00000316048 DISP1Q96F81 1524 aa5□□□□□ -1.61
SMCO3-201ENST00000316048 MYOCOSA0A1B0GUC4 107 aa5□□□□□ -1.61
SMCO3-201ENST00000316048 WNT10BO00744 389 aa5□□□□□ -1.61
SMCO3-201ENST00000316048 CUTAO60888 179 aa5□□□□□ -1.61
SMCO3-201ENST00000316048 SYN1P17600 705 aa5□□□□□ -1.61
SMCO3-201ENST00000316048 XPAP23025 273 aaPredicted RBP5□□□□□ -1.61
SMCO3-201ENST00000316048 CTSSP25774 331 aa5□□□□□ -1.61
SMCO3-201ENST00000316048 WASP42768 502 aa5□□□□□ -1.61
SMCO3-201ENST00000316048 CDR1P51861 262 aa5□□□□□ -1.61
SMCO3-201ENST00000316048 EPHB3P54753 998 aa5□□□□□ -1.61
SMCO3-201ENST00000316048 GJA9P57773 515 aa5□□□□□ -1.61
SMCO3-201ENST00000316048 FAM193AP78312 1265 aa5□□□□□ -1.61
SMCO3-201ENST00000316048 SMAD4Q13485 552 aaKnown RBP5□□□□□ -1.61
SMCO3-201ENST00000316048 GRAMD1BQ3KR37 738 aa5□□□□□ -1.61
SMCO3-201ENST00000316048 WDR72Q3MJ13 1102 aa5□□□□□ -1.61
SMCO3-201ENST00000316048 CEP170Q5SW79 1584 aa5□□□□□ -1.61
SMCO3-201ENST00000316048 APOA5Q6Q788 366 aa5□□□□□ -1.61
SMCO3-201ENST00000316048 TOGARAM2Q6ZUX3 1019 aa5□□□□□ -1.61
SMCO3-201ENST00000316048 SUPT6HQ7KZ85 1726 aaKnown RBP5□□□□□ -1.61
SMCO3-201ENST00000316048 OTOP2Q7RTS6 562 aa5□□□□□ -1.61
SMCO3-201ENST00000316048 IRF2BP1Q8IU81 584 aa5□□□□□ -1.61
SMCO3-201ENST00000316048 FBXO18Q8NFZ0 1043 aa5□□□□□ -1.61
SMCO3-201ENST00000316048 LIN37Q96GY3 246 aaPredicted RBP5□□□□□ -1.61
SMCO3-201ENST00000316048 DMRTA2Q96SC8 542 aa5□□□□□ -1.61
SMCO3-201ENST00000316048 SGPP1Q9BX95 441 aa5□□□□□ -1.61
SMCO3-201ENST00000316048 SETD5Q9C0A6 1442 aa5□□□□□ -1.61
SMCO3-201ENST00000316048 CNTD2Q9H8S5 307 aa5□□□□□ -1.61
SMCO3-201ENST00000316048 ZMAT3Q9HA38 289 aaKnown RBP5□□□□□ -1.61
SMCO3-201ENST00000316048 PLCB1Q9NQ66 1216 aa5□□□□□ -1.61
SMCO3-201ENST00000316048 RBM12Q9NTZ6 932 aaKnown RBP5□□□□□ -1.61
SMCO3-201ENST00000316048 PCDHA5Q9Y5H7 936 aa5□□□□□ -1.61
SMCO3-201ENST00000316048 NCOA2Q15596 1464 aa4.99□□□□□ -1.61
SMCO3-201ENST00000316048 IRS2Q9Y4H2 1338 aa4.99□□□□□ -1.61
SMCO3-201ENST00000316048 MYOM3Q5VTT5 1437 aa4.99□□□□□ -1.61
SMCO3-201ENST00000316048 FGD6Q6ZV73 1430 aa4.99□□□□□ -1.61
SMCO3-201ENST00000316048 CAPN8A6NHC0 703 aa4.99□□□□□ -1.61
SMCO3-201ENST00000316048 ADCY6O43306 1168 aa4.99□□□□□ -1.61
SMCO3-201ENST00000316048 AKR1B10O60218 316 aa4.99□□□□□ -1.61
SMCO3-201ENST00000316048 PRAMEF4O60810 478 aa4.99□□□□□ -1.61
SMCO3-201ENST00000316048 FOSP01100 380 aaPredicted RBP4.99□□□□□ -1.61
SMCO3-201ENST00000316048 GLI1P08151 1106 aa4.99□□□□□ -1.61
SMCO3-201ENST00000316048 PIK3CBP42338 1070 aa4.99□□□□□ -1.61
SMCO3-201ENST00000316048 TM4SF4P48230 202 aa4.99□□□□□ -1.61
SMCO3-201ENST00000316048 PRIM2P49643 509 aa4.99□□□□□ -1.61
SMCO3-201ENST00000316048 TARDBPQ13148 414 aaKnown RBP eCLIP4.99□□□□□ -1.61
SMCO3-201ENST00000316048 C4orf46Q504U0 113 aa4.99□□□□□ -1.61
SMCO3-201ENST00000316048 CCDC157Q569K6 752 aa4.99□□□□□ -1.61
SMCO3-201ENST00000316048 DARS2Q6PI48 645 aaKnown RBP4.99□□□□□ -1.61
SMCO3-201ENST00000316048 DAAM2Q86T65 1068 aa4.99□□□□□ -1.61
SMCO3-201ENST00000316048 LDHDQ86WU2 507 aa4.99□□□□□ -1.61
SMCO3-201ENST00000316048 PPP1R14CQ8TAE6 165 aa4.99□□□□□ -1.61
SMCO3-201ENST00000316048 WDR48Q8TAF3 677 aa4.99□□□□□ -1.61
SMCO3-201ENST00000316048 TNIP3Q96KP6 325 aa4.99□□□□□ -1.61
SMCO3-201ENST00000316048 TMEM209Q96SK2 561 aa4.99□□□□□ -1.61
SMCO3-201ENST00000316048 VRK1Q99986 396 aaPredicted RBP4.99□□□□□ -1.61
SMCO3-201ENST00000316048 C22orf23Q9BZE7 217 aa4.99□□□□□ -1.61
SMCO3-201ENST00000316048 ZNF552Q9H707 407 aaPredicted RBP4.99□□□□□ -1.61
SMCO3-201ENST00000316048 NLRC4Q9NPP4 1024 aa4.99□□□□□ -1.61
SMCO3-201ENST00000316048 CORO2BQ9UQ03 480 aa4.99□□□□□ -1.61
SMCO3-201ENST00000316048 A0A1W2PR48 441 aa4.99□□□□□ -1.61
SMCO3-201ENST00000316048 CFAP69A5D8W1 941 aa4.99□□□□□ -1.61
SMCO3-201ENST00000316048 ZNF503-AS2A6NEH8 195 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms