RNA–Protein interactions for RNA: ENST00000315713.5

ABCD3-201, Transcript of ATP binding cassette subfamily D member 3, humanhuman

TSL 1 (best) BASIC

Gene ABCD3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3-201ENST00000315713 LRRC43Q8N309 656 aa13.43□□□□□ -0.26
ABCD3-201ENST00000315713 RASSF8Q8NHQ8 419 aa13.43□□□□□ -0.26
ABCD3-201ENST00000315713 MRPS27Q92552 414 aaKnown RBP13.43□□□□□ -0.26
ABCD3-201ENST00000315713 CALML4Q96GE6 196 aa13.43□□□□□ -0.26
ABCD3-201ENST00000315713 AK8Q96MA6 479 aa13.43□□□□□ -0.26
ABCD3-201ENST00000315713 CASD1Q96PB1 797 aa13.43□□□□□ -0.26
ABCD3-201ENST00000315713 FDXACB1Q9BRP7 624 aaPredicted RBP13.43□□□□□ -0.26
ABCD3-201ENST00000315713 NT5C3AQ9H0P0 336 aa13.43□□□□□ -0.26
ABCD3-201ENST00000315713 S1PR5Q9H228 398 aa13.43□□□□□ -0.26
ABCD3-201ENST00000315713 TSHZ2Q9NRE2 1034 aa13.43□□□□□ -0.26
ABCD3-201ENST00000315713 DNM3Q9UQ16 869 aa13.43□□□□□ -0.26
ABCD3-201ENST00000315713 LZTS1Q9Y250 596 aa13.43□□□□□ -0.26
ABCD3-201ENST00000315713 COL4A3BPQ9Y5P4 624 aa13.43□□□□□ -0.26
ABCD3-201ENST00000315713 DCHS1Q96JQ0 3298 aa13.42□□□□□ -0.26
ABCD3-201ENST00000315713 E9PMD0 336 aa13.42□□□□□ -0.26
ABCD3-201ENST00000315713 ASAP2O43150 1006 aa13.42□□□□□ -0.26
ABCD3-201ENST00000315713 SRGAP2CP0DJJ0 459 aa13.42□□□□□ -0.26
ABCD3-201ENST00000315713 DARSP14868 501 aaKnown RBP13.42□□□□□ -0.26
ABCD3-201ENST00000315713 PLCB3Q01970 1234 aa13.42□□□□□ -0.26
ABCD3-201ENST00000315713 GRIN1Q05586 938 aa13.42□□□□□ -0.26
ABCD3-201ENST00000315713 PDE12Q6L8Q7 609 aaKnown RBP13.42□□□□□ -0.26
ABCD3-201ENST00000315713 PADI6Q6TGC4 694 aa13.42□□□□□ -0.26
ABCD3-201ENST00000315713 KCNT2Q6UVM3 1135 aa13.42□□□□□ -0.26
ABCD3-201ENST00000315713 TMEM184AQ6ZMB5 413 aa13.42□□□□□ -0.26
ABCD3-201ENST00000315713 ZBTB33Q86T24 672 aa13.42□□□□□ -0.26
ABCD3-201ENST00000315713 MCPH1Q8NEM0 835 aa13.42□□□□□ -0.26
ABCD3-201ENST00000315713 PRPF31Q8WWY3 499 aaKnown RBP13.42□□□□□ -0.26
ABCD3-201ENST00000315713 PLIN2Q99541 437 aa13.42□□□□□ -0.26
ABCD3-201ENST00000315713 PRRX2Q99811 253 aa13.42□□□□□ -0.26
ABCD3-201ENST00000315713 MMTAG2Q9BU76 263 aaKnown RBP13.42□□□□□ -0.26
ABCD3-201ENST00000315713 INO80BQ9C086 356 aaPredicted RBP13.42□□□□□ -0.26
ABCD3-201ENST00000315713 TMEM117Q9H0C3 514 aa13.42□□□□□ -0.26
ABCD3-201ENST00000315713 BHMT2Q9H2M3 363 aa13.42□□□□□ -0.26
ABCD3-201ENST00000315713 ELAC1Q9H777 363 aaKnown RBP13.42□□□□□ -0.26
ABCD3-201ENST00000315713 XPNPEP1Q9NQW7 623 aa13.42□□□□□ -0.26
ABCD3-201ENST00000315713 DAXXQ9UER7 740 aaPredicted RBP13.42□□□□□ -0.26
ABCD3-201ENST00000315713 TCHHQ07283 1943 aa13.42□□□□□ -0.26
ABCD3-201ENST00000315713 MTCL1Q9Y4B5 1905 aaKnown RBP13.42□□□□□ -0.26
ABCD3-201ENST00000315713 DOCK6Q96HP0 2047 aa13.41□□□□□ -0.26
ABCD3-201ENST00000315713 GFRA3O60609 400 aa13.41□□□□□ -0.26
ABCD3-201ENST00000315713 SFPQP23246 707 aaKnown RBP eCLIP13.41□□□□□ -0.262e-13■■■□□ 14.7
ABCD3-201ENST00000315713 FAM189BP81408 668 aa13.41□□□□□ -0.26
ABCD3-201ENST00000315713 LAMTOR4Q0VGL1 99 aa13.41□□□□□ -0.26
ABCD3-201ENST00000315713 TFDP1Q14186 410 aa13.41□□□□□ -0.26
ABCD3-201ENST00000315713 MXD4Q14582 209 aaPredicted RBP13.41□□□□□ -0.26
ABCD3-201ENST00000315713 SLC39A14Q15043 492 aa13.41□□□□□ -0.26
ABCD3-201ENST00000315713 CLLU1OSQ5K130 101 aa13.41□□□□□ -0.26
ABCD3-201ENST00000315713 ABI1Q8IZP0 508 aa13.41□□□□□ -0.26
ABCD3-201ENST00000315713 RNF149Q8NC42 400 aa13.41□□□□□ -0.26
ABCD3-201ENST00000315713 RNF169Q8NCN4 708 aa13.41□□□□□ -0.26
ABCD3-201ENST00000315713 ZNF558Q96NG5 402 aa13.41□□□□□ -0.26
ABCD3-201ENST00000315713 CSRNP2Q9H175 543 aa13.41□□□□□ -0.26
ABCD3-201ENST00000315713 POLR3FQ9H1D9 316 aaPredicted RBP13.41□□□□□ -0.26
ABCD3-201ENST00000315713 TFIP11Q9UBB9 837 aaKnown RBP13.41□□□□□ -0.26
ABCD3-201ENST00000315713 SRPRBQ9Y5M8 271 aaKnown RBP13.41□□□□□ -0.26
ABCD3-201ENST00000315713 HOXA2O43364 376 aa13.4□□□□□ -0.26
ABCD3-201ENST00000315713 SLC26A4O43511 780 aa13.4□□□□□ -0.26
ABCD3-201ENST00000315713 CSDE1O75534 798 aaKnown RBP13.4□□□□□ -0.26
ABCD3-201ENST00000315713 SSBP05455 408 aaKnown RBP eCLIP13.4□□□□□ -0.26
ABCD3-201ENST00000315713 ZSCAN20P17040 1043 aaPredicted RBP13.4□□□□□ -0.26
ABCD3-201ENST00000315713 FGFR4P22455 802 aa13.4□□□□□ -0.26
ABCD3-201ENST00000315713 PPM1AP35813 382 aa13.4□□□□□ -0.26
ABCD3-201ENST00000315713 NASPP49321 788 aaPredicted RBP13.4□□□□□ -0.26
ABCD3-201ENST00000315713 SPECC1Q5M775 1068 aa13.4□□□□□ -0.26
ABCD3-201ENST00000315713 HYIQ5T013 277 aa13.4□□□□□ -0.26
ABCD3-201ENST00000315713 FAM43BQ6ZT52 329 aaPredicted RBP13.4□□□□□ -0.26
ABCD3-201ENST00000315713 ECHDC2Q86YB7 292 aa13.4□□□□□ -0.26
ABCD3-201ENST00000315713 KREMEN2Q8NCW0 462 aa13.4□□□□□ -0.26
ABCD3-201ENST00000315713 ASAP3Q8TDY4 903 aa13.4□□□□□ -0.26
ABCD3-201ENST00000315713 SNX27Q96L92 541 aa13.4□□□□□ -0.26
ABCD3-201ENST00000315713 PNMA5Q96PV4 448 aa13.4□□□□□ -0.26
ABCD3-201ENST00000315713 SMOC2Q9H3U7 446 aa13.4□□□□□ -0.26
ABCD3-201ENST00000315713 POMKQ9H5K3 350 aa13.4□□□□□ -0.26
ABCD3-201ENST00000315713 GPRC5CQ9NQ84 441 aa13.4□□□□□ -0.26
ABCD3-201ENST00000315713 FBXO2Q9UK22 296 aaPredicted RBP13.4□□□□□ -0.26
ABCD3-201ENST00000315713 DMDP11532 3685 aa13.4□□□□□ -0.26
ABCD3-201ENST00000315713 GVINP1Q7Z2Y8 2422 aa13.4□□□□□ -0.26
ABCD3-201ENST00000315713 C2CD4DB7Z1M9 353 aa13.39□□□□□ -0.27
ABCD3-201ENST00000315713 SPTLC2O15270 562 aa13.39□□□□□ -0.27
ABCD3-201ENST00000315713 BRD1O95696 1058 aa13.39□□□□□ -0.27
ABCD3-201ENST00000315713 WEE2P0C1S8 567 aa13.39□□□□□ -0.27
ABCD3-201ENST00000315713 CYP11B2P19099 503 aa13.39□□□□□ -0.27
ABCD3-201ENST00000315713 AVPR2P30518 371 aa13.39□□□□□ -0.27
ABCD3-201ENST00000315713 CA8P35219 290 aa13.39□□□□□ -0.27
ABCD3-201ENST00000315713 ARL2P36404 184 aa13.39□□□□□ -0.27
ABCD3-201ENST00000315713 TXLNAP40222 546 aa13.39□□□□□ -0.27
ABCD3-201ENST00000315713 PHKA2P46019 1235 aa13.39□□□□□ -0.27
ABCD3-201ENST00000315713 SMC1AQ14683 1233 aaKnown RBP13.39□□□□□ -0.27
ABCD3-201ENST00000315713 KARSQ15046 597 aaKnown RBP13.39□□□□□ -0.27
ABCD3-201ENST00000315713 TMEM119Q4V9L6 283 aa13.39□□□□□ -0.27
ABCD3-201ENST00000315713 CATSPER4Q7RTX7 472 aa13.39□□□□□ -0.27
ABCD3-201ENST00000315713 TMC7Q7Z402 723 aa13.39□□□□□ -0.27
ABCD3-201ENST00000315713 KCNK18Q7Z418 384 aa13.39□□□□□ -0.27
ABCD3-201ENST00000315713 SRGAP1Q7Z6B7 1085 aa13.39□□□□□ -0.27
ABCD3-201ENST00000315713 KCTD17Q8N5Z5 321 aa13.39□□□□□ -0.27
ABCD3-201ENST00000315713 KRI1Q8N9T8 703 aaKnown RBP13.39□□□□□ -0.27
ABCD3-201ENST00000315713 LINC00301Q8NCQ3 95 aa13.39□□□□□ -0.27
ABCD3-201ENST00000315713 HELQQ8TDG4 1101 aa13.39□□□□□ -0.27
ABCD3-201ENST00000315713 CASP10Q92851 521 aa13.39□□□□□ -0.27
ABCD3-201ENST00000315713 ATOH1Q92858 354 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms