RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 VSIG10LQ86VR7 867 aa16.11■□□□□ 0.17
CHFR-202ENST00000315585 SPATS2Q86XZ4 545 aaKnown RBP16.11■□□□□ 0.17
CHFR-202ENST00000315585 WNK4Q96J92 1243 aa16.11■□□□□ 0.17
CHFR-202ENST00000315585 ZFP91Q96JP5 570 aaPredicted RBP16.11■□□□□ 0.17
CHFR-202ENST00000315585 RSPH14Q9UHP6 348 aa16.11■□□□□ 0.17
CHFR-202ENST00000315585 KCNG1Q9UIX4 513 aa16.11■□□□□ 0.17
CHFR-202ENST00000315585 ESYT3A0FGR9 886 aa16.1■□□□□ 0.17
CHFR-202ENST00000315585 DDX39AO00148 427 aaKnown RBP16.1■□□□□ 0.17
CHFR-202ENST00000315585 EBAG9O00559 213 aa16.1■□□□□ 0.17
CHFR-202ENST00000315585 CXCL11O14625 94 aa16.1■□□□□ 0.17
CHFR-202ENST00000315585 DHX15O43143 795 aaKnown RBP16.1■□□□□ 0.17
CHFR-202ENST00000315585 NR3C2P08235 984 aa16.1■□□□□ 0.17
CHFR-202ENST00000315585 TRIM49P0CI25 452 aa16.1■□□□□ 0.17
CHFR-202ENST00000315585 TRIM49CP0CI26 452 aa16.1■□□□□ 0.17
CHFR-202ENST00000315585 YWHABP31946 246 aaKnown RBP16.1■□□□□ 0.17
CHFR-202ENST00000315585 GUCY2FP51841 1108 aa16.1■□□□□ 0.17
CHFR-202ENST00000315585 ARHGAP44Q17R89 818 aa16.1■□□□□ 0.17
CHFR-202ENST00000315585 KDM7AQ6ZMT4 941 aa16.1■□□□□ 0.17
CHFR-202ENST00000315585 DAW1Q8N136 415 aa16.1■□□□□ 0.17
CHFR-202ENST00000315585 FAM81BQ96LP2 452 aa16.1■□□□□ 0.17
CHFR-202ENST00000315585 C17orf75Q9HAS0 396 aa16.1■□□□□ 0.17
CHFR-202ENST00000315585 UBE2TQ9NPD8 197 aaPredicted RBP16.1■□□□□ 0.17
CHFR-202ENST00000315585 EMSYQ7Z589 1322 aa16.1■□□□□ 0.17
CHFR-202ENST00000315585 WDR90Q96KV7 1748 aa16.1■□□□□ 0.17
CHFR-202ENST00000315585 COL11A1P12107 1806 aaPredicted RBP16.1■□□□□ 0.17
CHFR-202ENST00000315585 TESPA1A2RU30 521 aaPredicted RBP16.1■□□□□ 0.17
CHFR-202ENST00000315585 WDR64B1ANS9 1081 aa16.1■□□□□ 0.17
CHFR-202ENST00000315585 MYO1CO00159 1063 aa16.1■□□□□ 0.17
CHFR-202ENST00000315585 BUB1BO60566 1050 aaPredicted RBP16.1■□□□□ 0.17
CHFR-202ENST00000315585 GZMAP12544 262 aa16.1■□□□□ 0.17
CHFR-202ENST00000315585 GNGT1P63211 74 aa16.1■□□□□ 0.17
CHFR-202ENST00000315585 C11orf63Q6NUN7 778 aa16.1■□□□□ 0.17
CHFR-202ENST00000315585 HAUS6Q7Z4H7 955 aa16.1■□□□□ 0.17
CHFR-202ENST00000315585 KSR1Q8IVT5 923 aa16.1■□□□□ 0.17
CHFR-202ENST00000315585 RDH13Q8NBN7 331 aa16.1■□□□□ 0.17
CHFR-202ENST00000315585 ZBTB9Q96C00 473 aa16.1■□□□□ 0.17
CHFR-202ENST00000315585 GPR88Q9GZN0 384 aa16.1■□□□□ 0.17
CHFR-202ENST00000315585 BCAS3Q9H6U6 928 aa16.1■□□□□ 0.17
CHFR-202ENST00000315585 MYH11P35749 1972 aa16.1■□□□□ 0.17
CHFR-202ENST00000315585 IQCA1LA6NCM1 817 aa16.09■□□□□ 0.17
CHFR-202ENST00000315585 SRRM3A6NNA2 597 aaPredicted RBP16.09■□□□□ 0.17
CHFR-202ENST00000315585 GGPS1O95749 300 aa16.09■□□□□ 0.17
CHFR-202ENST00000315585 FAM153BP0C7A2 387 aa16.09■□□□□ 0.17
CHFR-202ENST00000315585 MYZAPP0CAP1 466 aa16.09■□□□□ 0.17
CHFR-202ENST00000315585 ZBTB48P10074 688 aaPredicted RBP16.09■□□□□ 0.17
CHFR-202ENST00000315585 MCCD1P59942 119 aaPredicted RBP16.09■□□□□ 0.17
CHFR-202ENST00000315585 GPC5P78333 572 aa16.09■□□□□ 0.17
CHFR-202ENST00000315585 ENPEPQ07075 957 aa16.09■□□□□ 0.17
CHFR-202ENST00000315585 BIRC3Q13489 604 aa16.09■□□□□ 0.17
CHFR-202ENST00000315585 FAM153CQ494X1 144 aa16.09■□□□□ 0.17
CHFR-202ENST00000315585 PHLDB3Q6NSJ2 640 aa16.09■□□□□ 0.17
CHFR-202ENST00000315585 OTUD6AQ7L8S5 288 aa16.09■□□□□ 0.17
CHFR-202ENST00000315585 LMO3Q8TAP4 145 aa16.09■□□□□ 0.17
CHFR-202ENST00000315585 SEC14L1Q92503 715 aa16.09■□□□□ 0.17
CHFR-202ENST00000315585 CDCA5Q96FF9 252 aa16.09■□□□□ 0.17
CHFR-202ENST00000315585 ATP6V1G3Q96LB4 118 aa16.09■□□□□ 0.17
CHFR-202ENST00000315585 RUNDC3BQ96NL0 473 aa16.09■□□□□ 0.17
CHFR-202ENST00000315585 AP1M1Q9BXS5 423 aa16.09■□□□□ 0.17
CHFR-202ENST00000315585 CYP39A1Q9NYL5 469 aa16.09■□□□□ 0.17
CHFR-202ENST00000315585 HSPBP1Q9NZL4 362 aa16.09■□□□□ 0.17
CHFR-202ENST00000315585 PKD2L1Q9P0L9 805 aa16.09■□□□□ 0.17
CHFR-202ENST00000315585 FAM153AQ9UHL3 310 aa16.09■□□□□ 0.17
CHFR-202ENST00000315585 RASAL2Q9UJF2 1139 aa16.09■□□□□ 0.17
CHFR-202ENST00000315585 SYNGAP1Q96PV0 1343 aa16.09■□□□□ 0.17
CHFR-202ENST00000315585 FAM187AA6NFU0 413 aa16.09■□□□□ 0.17
CHFR-202ENST00000315585 BHMG1C9JSJ3 638 aaPredicted RBP16.09■□□□□ 0.17
CHFR-202ENST00000315585 FOXN3O00409 490 aaPredicted RBP16.09■□□□□ 0.17
CHFR-202ENST00000315585 ZEB2O60315 1214 aa16.09■□□□□ 0.17
CHFR-202ENST00000315585 ABCB4P21439 1286 aa16.09■□□□□ 0.17
CHFR-202ENST00000315585 MFAP3P55082 362 aa16.09■□□□□ 0.17
CHFR-202ENST00000315585 ERVK-9P63128 1117 aa16.09■□□□□ 0.17
CHFR-202ENST00000315585 ITGB3BPQ13352 177 aaPredicted RBP16.09■□□□□ 0.17
CHFR-202ENST00000315585 DHX34Q14147 1143 aaKnown RBP16.09■□□□□ 0.17
CHFR-202ENST00000315585 TTLL12Q14166 644 aaPredicted RBP16.09■□□□□ 0.17
CHFR-202ENST00000315585 GNPTABQ3T906 1256 aa16.09■□□□□ 0.17
CHFR-202ENST00000315585 TTMPQ5BVD1 217 aa16.09■□□□□ 0.17
CHFR-202ENST00000315585 RPS6KC1Q96S38 1066 aa16.09■□□□□ 0.17
CHFR-202ENST00000315585 RASSF4Q9H2L5 321 aa16.09■□□□□ 0.17
CHFR-202ENST00000315585 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.09■□□□□ 0.17
CHFR-202ENST00000315585 A0A0G2JLL6 359 aaPredicted RBP16.08■□□□□ 0.17
CHFR-202ENST00000315585 RTN2O75298 545 aa16.08■□□□□ 0.17
CHFR-202ENST00000315585 KRT14P02533 472 aa16.08■□□□□ 0.17
CHFR-202ENST00000315585 FGGP02679 453 aa16.08■□□□□ 0.17
CHFR-202ENST00000315585 MXI1P50539 228 aa16.08■□□□□ 0.17
CHFR-202ENST00000315585 ZNF746Q6NUN9 644 aaPredicted RBP16.08■□□□□ 0.17
CHFR-202ENST00000315585 LBX2Q6XYB7 198 aa16.08■□□□□ 0.17
CHFR-202ENST00000315585 B4GALNT4Q76KP1 1039 aa16.08■□□□□ 0.17
CHFR-202ENST00000315585 ARMC9Q7Z3E5 817 aa16.08■□□□□ 0.17
CHFR-202ENST00000315585 PRRT2Q7Z6L0 340 aaPredicted RBP16.08■□□□□ 0.17
CHFR-202ENST00000315585 EFCAB13Q8IY85 973 aa16.08■□□□□ 0.17
CHFR-202ENST00000315585 DNERQ8NFT8 737 aa16.08■□□□□ 0.17
CHFR-202ENST00000315585 BCAS4Q8TDM0 211 aa16.08■□□□□ 0.17
CHFR-202ENST00000315585 ZSCAN5CA6NGD5 496 aaPredicted RBP16.08■□□□□ 0.16
CHFR-202ENST00000315585 SPDYE5A6NIY4 337 aa16.08■□□□□ 0.16
CHFR-202ENST00000315585 ZNF233A6NK53 670 aa16.08■□□□□ 0.16
CHFR-202ENST00000315585 CDR1P51861 262 aa16.08■□□□□ 0.16
CHFR-202ENST00000315585 NCKAP1LP55160 1127 aa16.08■□□□□ 0.16
CHFR-202ENST00000315585 PTENP60484 403 aa16.08■□□□□ 0.16
CHFR-202ENST00000315585 IRX3P78415 501 aaPredicted RBP16.08■□□□□ 0.16
CHFR-202ENST00000315585 EPC2Q52LR7 807 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms