RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 LIG4P49917 911 aa19.9■□□□□ 0.78
CCDC43-201ENST00000315286 GLYCTKQ8IVS8 523 aa19.9■□□□□ 0.78
CCDC43-201ENST00000315286 CAGE1Q8TC20 777 aa19.9■□□□□ 0.78
CCDC43-201ENST00000315286 SEMA4DQ92854 862 aa19.9■□□□□ 0.78
CCDC43-201ENST00000315286 PNKPQ96T60 521 aa19.9■□□□□ 0.78
CCDC43-201ENST00000315286 PSMB7Q99436 277 aa19.9■□□□□ 0.78
CCDC43-201ENST00000315286 FAM213AQ9BRX8 229 aa19.9■□□□□ 0.78
CCDC43-201ENST00000315286 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.9■□□□□ 0.782e-12■■■■■ 298.1
CCDC43-201ENST00000315286 TOPORSQ9NS56 1045 aaPredicted RBP19.9■□□□□ 0.78
CCDC43-201ENST00000315286 HYOU1Q9Y4L1 999 aa19.9■□□□□ 0.78
CCDC43-201ENST00000315286 CCDC172P0C7W6 258 aa19.9■□□□□ 0.78
CCDC43-201ENST00000315286 CXCR5P32302 372 aa19.9■□□□□ 0.78
CCDC43-201ENST00000315286 STRN3Q13033 797 aa19.9■□□□□ 0.78
CCDC43-201ENST00000315286 TMEM63BQ5T3F8 832 aa19.9■□□□□ 0.78
CCDC43-201ENST00000315286 KRT39Q6A163 491 aa19.9■□□□□ 0.78
CCDC43-201ENST00000315286 FMNL3Q8IVF7 1028 aa19.9■□□□□ 0.78
CCDC43-201ENST00000315286 SHCBP1Q8NEM2 672 aa19.9■□□□□ 0.78
CCDC43-201ENST00000315286 DEPTORQ8TB45 409 aa19.9■□□□□ 0.78
CCDC43-201ENST00000315286 KAT5Q92993 513 aa19.9■□□□□ 0.78
CCDC43-201ENST00000315286 AZI2Q9H6S1 392 aa19.9■□□□□ 0.78
CCDC43-201ENST00000315286 TMEM8AQ9HCN3 771 aa19.9■□□□□ 0.78
CCDC43-201ENST00000315286 PNMA3Q9UL41 463 aa19.9■□□□□ 0.78
CCDC43-201ENST00000315286 GRID2IPA4D2P6 1211 aa19.89■□□□□ 0.77
CCDC43-201ENST00000315286 K7ERI5 159 aa19.89■□□□□ 0.77
CCDC43-201ENST00000315286 SEC31AO94979 1220 aaKnown RBP19.89■□□□□ 0.77
CCDC43-201ENST00000315286 ZRANB2O95218 330 aaKnown RBP eCLIP19.89■□□□□ 0.77
CCDC43-201ENST00000315286 H2AFZP0C0S5 128 aa19.89■□□□□ 0.77
CCDC43-201ENST00000315286 TCP1P17987 556 aaKnown RBP19.89■□□□□ 0.77
CCDC43-201ENST00000315286 MARK3P27448 753 aa19.89■□□□□ 0.77
CCDC43-201ENST00000315286 DRP2Q13474 957 aa19.89■□□□□ 0.77
CCDC43-201ENST00000315286 KIF22Q14807 665 aa19.89■□□□□ 0.77
CCDC43-201ENST00000315286 CCDC62Q6P9F0 684 aa19.89■□□□□ 0.77
CCDC43-201ENST00000315286 H2AFVQ71UI9 128 aa19.89■□□□□ 0.77
CCDC43-201ENST00000315286 TRIM50Q86XT4 487 aa19.89■□□□□ 0.77
CCDC43-201ENST00000315286 MORC4Q8TE76 937 aa19.89■□□□□ 0.77
CCDC43-201ENST00000315286 GLG1Q92896 1179 aa19.89■□□□□ 0.77
CCDC43-201ENST00000315286 KCNN1Q92952 543 aa19.89■□□□□ 0.77
CCDC43-201ENST00000315286 COQ4Q9Y3A0 265 aa19.89■□□□□ 0.77
CCDC43-201ENST00000315286 MAFO75444 373 aaPredicted RBP19.88■□□□□ 0.77
CCDC43-201ENST00000315286 FTCDO95954 541 aa19.88■□□□□ 0.77
CCDC43-201ENST00000315286 MKRN3Q13064 507 aaKnown RBP19.88■□□□□ 0.77
CCDC43-201ENST00000315286 CC2D1AQ6P1N0 951 aaPredicted RBP19.88■□□□□ 0.77
CCDC43-201ENST00000315286 COPS5Q92905 334 aa19.88■□□□□ 0.77
CCDC43-201ENST00000315286 MS4A4AQ96JQ5 239 aa19.88■□□□□ 0.77
CCDC43-201ENST00000315286 RPGRIP1Q96KN7 1286 aa19.88■□□□□ 0.77
CCDC43-201ENST00000315286 PDGFCQ9NRA1 345 aa19.88■□□□□ 0.77
CCDC43-201ENST00000315286 RAB21Q9UL25 225 aa19.88■□□□□ 0.77
CCDC43-201ENST00000315286 ZNF233A6NK53 670 aa19.88■□□□□ 0.77
CCDC43-201ENST00000315286 PDHXO00330 501 aa19.88■□□□□ 0.77
CCDC43-201ENST00000315286 NOP56O00567 594 aaKnown RBP19.88■□□□□ 0.77
CCDC43-201ENST00000315286 LGR5O75473 907 aa19.88■□□□□ 0.77
CCDC43-201ENST00000315286 DLATP10515 647 aaKnown RBP19.88■□□□□ 0.77
CCDC43-201ENST00000315286 DHX37Q8IY37 1157 aaKnown RBP19.88■□□□□ 0.77
CCDC43-201ENST00000315286 GPRC5AQ8NFJ5 357 aa19.88■□□□□ 0.77
CCDC43-201ENST00000315286 STYXL1Q9Y6J8 313 aa19.88■□□□□ 0.77
CCDC43-201ENST00000315286 ATP8B3O60423 1300 aa19.87■□□□□ 0.77
CCDC43-201ENST00000315286 EXTL3O43909 919 aa19.87■□□□□ 0.77
CCDC43-201ENST00000315286 NOP2P46087 812 aaKnown RBP19.87■□□□□ 0.77
CCDC43-201ENST00000315286 GALCP54803 685 aa19.87■□□□□ 0.77
CCDC43-201ENST00000315286 SV2AQ7L0J3 742 aa19.87■□□□□ 0.77
CCDC43-201ENST00000315286 TAS1R2Q8TE23 839 aa19.87■□□□□ 0.77
CCDC43-201ENST00000315286 VTI1AQ96AJ9 217 aa19.87■□□□□ 0.77
CCDC43-201ENST00000315286 ZBTB45Q96K62 511 aaPredicted RBP19.87■□□□□ 0.77
CCDC43-201ENST00000315286 KREMEN1Q96MU8 473 aa19.87■□□□□ 0.77
CCDC43-201ENST00000315286 SPATA33Q96N06 139 aa19.87■□□□□ 0.77
CCDC43-201ENST00000315286 HAPLN2Q9GZV7 340 aa19.87■□□□□ 0.77
CCDC43-201ENST00000315286 OGFRQ9NZT2 677 aa19.87■□□□□ 0.77
CCDC43-201ENST00000315286 INTUQ9ULD6 942 aa19.87■□□□□ 0.77
CCDC43-201ENST00000315286 SIP14410 1827 aa19.87■□□□□ 0.77
CCDC43-201ENST00000315286 TMCO5BA8MYB1 307 aa19.87■□□□□ 0.77
CCDC43-201ENST00000315286 TXNP10599 105 aaKnown RBP19.87■□□□□ 0.77
CCDC43-201ENST00000315286 TNFAIP3P21580 790 aa19.87■□□□□ 0.77
CCDC43-201ENST00000315286 GTF2H1P32780 548 aa19.87■□□□□ 0.77
CCDC43-201ENST00000315286 GPC3P51654 580 aa19.87■□□□□ 0.77
CCDC43-201ENST00000315286 CAPSQ13938 189 aa19.87■□□□□ 0.77
CCDC43-201ENST00000315286 BRD3Q15059 726 aa19.87■□□□□ 0.77
CCDC43-201ENST00000315286 MEI1Q5TIA1 1274 aa19.87■□□□□ 0.77
CCDC43-201ENST00000315286 USP37Q86T82 979 aa19.87■□□□□ 0.77
CCDC43-201ENST00000315286 PPM1KQ8N3J5 372 aa19.87■□□□□ 0.77
CCDC43-201ENST00000315286 BBXQ8WY36 941 aaPredicted RBP19.87■□□□□ 0.77
CCDC43-201ENST00000315286 FAM167AQ96KS9 214 aa19.87■□□□□ 0.77
CCDC43-201ENST00000315286 TARS2Q9BW92 718 aaKnown RBP19.87■□□□□ 0.77
CCDC43-201ENST00000315286 TSKSQ9UJT2 592 aa19.87■□□□□ 0.77
CCDC43-201ENST00000315286 CCDC151A5D8V7 595 aa19.86■□□□□ 0.77
CCDC43-201ENST00000315286 UNCXA6NJT0 531 aa19.86■□□□□ 0.77
CCDC43-201ENST00000315286 BTBD19C9JJ37 291 aa19.86■□□□□ 0.77
CCDC43-201ENST00000315286 GRIN3BO60391 1043 aa19.86■□□□□ 0.77
CCDC43-201ENST00000315286 PIGRP01833 764 aa19.86■□□□□ 0.77
CCDC43-201ENST00000315286 EDN1P05305 212 aa19.86■□□□□ 0.77
CCDC43-201ENST00000315286 CETPP11597 493 aa19.86■□□□□ 0.77
CCDC43-201ENST00000315286 SCP2P22307 547 aa19.86■□□□□ 0.77
CCDC43-201ENST00000315286 NLRP11P59045 1033 aaKnown RBP19.86■□□□□ 0.77
CCDC43-201ENST00000315286 CBX1P83916 185 aa19.86■□□□□ 0.77
CCDC43-201ENST00000315286 PALB2Q86YC2 1186 aa19.86■□□□□ 0.77
CCDC43-201ENST00000315286 FBXL13Q8NEE6 735 aa19.86■□□□□ 0.77
CCDC43-201ENST00000315286 PRPF31Q8WWY3 499 aaKnown RBP19.86■□□□□ 0.77
CCDC43-201ENST00000315286 PSPC1Q8WXF1 523 aaKnown RBP19.86■□□□□ 0.77
CCDC43-201ENST00000315286 FAM84AQ96KN4 292 aa19.86■□□□□ 0.77
CCDC43-201ENST00000315286 AGPAT1Q99943 283 aa19.86■□□□□ 0.77
CCDC43-201ENST00000315286 RAB20Q9NX57 234 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms