RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 PDE6BP35913 854 aa14.46□□□□□ -0.09
SKA3-202ENST00000314759 ZNF76P36508 570 aa14.46□□□□□ -0.09
SKA3-202ENST00000314759 CRELD2Q6UXH1 353 aaPredicted RBP14.46□□□□□ -0.09
SKA3-202ENST00000314759 CROCCP2Q86T23 111 aa14.46□□□□□ -0.09
SKA3-202ENST00000314759 EXOC3L1Q86VI1 746 aa14.46□□□□□ -0.09
SKA3-202ENST00000314759 SPICE1Q8N0Z3 855 aa14.46□□□□□ -0.09
SKA3-202ENST00000314759 ART4Q93070 314 aa14.46□□□□□ -0.09
SKA3-202ENST00000314759 DYDC2Q96IM9 177 aa14.46□□□□□ -0.09
SKA3-202ENST00000314759 CD2APQ9Y5K6 639 aa14.46□□□□□ -0.09
SKA3-202ENST00000314759 AFF2P51816 1311 aa14.46□□□□□ -0.09
SKA3-202ENST00000314759 SNX3O60493 162 aa14.45□□□□□ -0.1
SKA3-202ENST00000314759 DIAPH2O60879 1101 aa14.45□□□□□ -0.1
SKA3-202ENST00000314759 BFSP1Q12934 665 aa14.45□□□□□ -0.1
SKA3-202ENST00000314759 RIPK1Q13546 671 aa14.45□□□□□ -0.1
SKA3-202ENST00000314759 MESDQ14696 234 aa14.45□□□□□ -0.1
SKA3-202ENST00000314759 SLMAPQ14BN4 828 aa14.45□□□□□ -0.1
SKA3-202ENST00000314759 ZNF746Q6NUN9 644 aaPredicted RBP14.45□□□□□ -0.1
SKA3-202ENST00000314759 OTOP1Q7RTM1 612 aa14.45□□□□□ -0.1
SKA3-202ENST00000314759 FAM178BQ8IXR5 827 aa14.45□□□□□ -0.1
SKA3-202ENST00000314759 UBE2TQ9NPD8 197 aaPredicted RBP14.45□□□□□ -0.1
SKA3-202ENST00000314759 IGLV3-22A0A075B6J6 115 aa14.45□□□□□ -0.1
SKA3-202ENST00000314759 CHMP2AO43633 222 aa14.45□□□□□ -0.1
SKA3-202ENST00000314759 KCNJ1P48048 391 aa14.45□□□□□ -0.1
SKA3-202ENST00000314759 ALDH5A1P51649 535 aaPredicted RBP14.45□□□□□ -0.1
SKA3-202ENST00000314759 GPC5P78333 572 aa14.45□□□□□ -0.1
SKA3-202ENST00000314759 GRIK3Q13003 919 aa14.45□□□□□ -0.1
SKA3-202ENST00000314759 ZNF268Q14587 947 aaPredicted RBP14.45□□□□□ -0.1
SKA3-202ENST00000314759 APOBEC3HQ6NTF7 200 aaKnown RBP14.45□□□□□ -0.1
SKA3-202ENST00000314759 CPNE8Q86YQ8 564 aa14.45□□□□□ -0.1
SKA3-202ENST00000314759 CCDC105Q8IYK2 499 aa14.45□□□□□ -0.1
SKA3-202ENST00000314759 KIF2BQ8N4N8 673 aa14.45□□□□□ -0.1
SKA3-202ENST00000314759 NYAP2Q9P242 653 aa14.45□□□□□ -0.1
SKA3-202ENST00000314759 SUGT1Q9Y2Z0 365 aa14.45□□□□□ -0.1
SKA3-202ENST00000314759 EME2A4GXA9 379 aaPredicted RBP14.45□□□□□ -0.1
SKA3-202ENST00000314759 EXOC3O60645 756 aa14.45□□□□□ -0.1
SKA3-202ENST00000314759 RARAP10276 462 aa14.45□□□□□ -0.1
SKA3-202ENST00000314759 COILP38432 576 aaPredicted RBP14.45□□□□□ -0.1
SKA3-202ENST00000314759 DLG4P78352 724 aa14.45□□□□□ -0.1
SKA3-202ENST00000314759 LRRC14Q15048 493 aa14.45□□□□□ -0.1
SKA3-202ENST00000314759 TCEAL1Q15170 157 aa14.45□□□□□ -0.1
SKA3-202ENST00000314759 MFSD5Q6N075 450 aa14.45□□□□□ -0.1
SKA3-202ENST00000314759 RPS6KC1Q96S38 1066 aa14.45□□□□□ -0.1
SKA3-202ENST00000314759 STMN4Q9H169 189 aaPredicted RBP14.45□□□□□ -0.1
SKA3-202ENST00000314759 PFASO15067 1338 aa14.44□□□□□ -0.1
SKA3-202ENST00000314759 F5H6K3 240 aa14.44□□□□□ -0.1
SKA3-202ENST00000314759 GGPS1O95749 300 aa14.44□□□□□ -0.1
SKA3-202ENST00000314759 OAS1P00973 400 aaKnown RBP14.44□□□□□ -0.1
SKA3-202ENST00000314759 BCRP11274 1271 aa14.44□□□□□ -0.1
SKA3-202ENST00000314759 GCKP35557 465 aa14.44□□□□□ -0.1
SKA3-202ENST00000314759 PDE6CP51160 858 aa14.44□□□□□ -0.1
SKA3-202ENST00000314759 ZNF131P52739 623 aa14.44□□□□□ -0.1
SKA3-202ENST00000314759 NCALDP61601 193 aa14.44□□□□□ -0.1
SKA3-202ENST00000314759 CYP1B1Q16678 543 aa14.44□□□□□ -0.1
SKA3-202ENST00000314759 ODR4Q5SWX8 454 aa14.44□□□□□ -0.1
SKA3-202ENST00000314759 FAM196AQ6ZSG2 479 aa14.44□□□□□ -0.1
SKA3-202ENST00000314759 TAOK1Q7L7X3 1001 aa14.44□□□□□ -0.1
SKA3-202ENST00000314759 CCDC25Q86WR0 208 aa14.44□□□□□ -0.1
SKA3-202ENST00000314759 ARHGEF19Q8IW93 802 aa14.44□□□□□ -0.1
SKA3-202ENST00000314759 RPUSD2Q8IZ73 545 aaKnown RBP14.44□□□□□ -0.1
SKA3-202ENST00000314759 KCTD17Q8N5Z5 321 aa14.44□□□□□ -0.1
SKA3-202ENST00000314759 CD101Q93033 1021 aa14.44□□□□□ -0.1
SKA3-202ENST00000314759 WDR18Q9BV38 432 aa14.44□□□□□ -0.1
SKA3-202ENST00000314759 NSRP1Q9H0G5 558 aaKnown RBP14.44□□□□□ -0.1
SKA3-202ENST00000314759 TUFT1Q9NNX1 390 aa14.44□□□□□ -0.1
SKA3-202ENST00000314759 CFAP73A6NFT4 308 aa14.44□□□□□ -0.1
SKA3-202ENST00000314759 ATMINO43313 823 aaPredicted RBP14.44□□□□□ -0.1
SKA3-202ENST00000314759 CYP3A4P08684 503 aa14.44□□□□□ -0.1
SKA3-202ENST00000314759 NQO1P15559 274 aaKnown RBP14.44□□□□□ -0.1
SKA3-202ENST00000314759 CREB1P16220 341 aa14.44□□□□□ -0.1
SKA3-202ENST00000314759 PEX19P40855 299 aa14.44□□□□□ -0.1
SKA3-202ENST00000314759 SIX1Q15475 284 aaPredicted RBP14.44□□□□□ -0.1
SKA3-202ENST00000314759 LONRF1Q17RB8 773 aa14.44□□□□□ -0.1
SKA3-202ENST00000314759 ZNF568Q3ZCX4 644 aa14.44□□□□□ -0.1
SKA3-202ENST00000314759 CERKLQ49MI3 558 aaPredicted RBP14.44□□□□□ -0.1
SKA3-202ENST00000314759 FAM182BQ5T319 152 aa14.44□□□□□ -0.1
SKA3-202ENST00000314759 SEL1L2Q5TEA6 688 aa14.44□□□□□ -0.1
SKA3-202ENST00000314759 SLC13A5Q86YT5 568 aaPredicted RBP14.44□□□□□ -0.1
SKA3-202ENST00000314759 PCDHB18PQ96TA0 734 aa14.44□□□□□ -0.1
SKA3-202ENST00000314759 POP1Q99575 1024 aaKnown RBP14.44□□□□□ -0.1
SKA3-202ENST00000314759 DDX23Q9BUQ8 820 aaKnown RBP14.44□□□□□ -0.1
SKA3-202ENST00000314759 KIF9Q9HAQ2 790 aa14.44□□□□□ -0.1
SKA3-202ENST00000314759 WRAP73Q9P2S5 460 aaPredicted RBP14.44□□□□□ -0.1
SKA3-202ENST00000314759 IGF2BP3O00425 579 aaKnown RBP eCLIP14.43□□□□□ -0.1
SKA3-202ENST00000314759 TP73O15350 636 aa14.43□□□□□ -0.1
SKA3-202ENST00000314759 RFX1P22670 979 aa14.43□□□□□ -0.1
SKA3-202ENST00000314759 IKQ13123 557 aaPredicted RBP14.43□□□□□ -0.1
SKA3-202ENST00000314759 MKRN4PQ13434 485 aaPredicted RBP14.43□□□□□ -0.1
SKA3-202ENST00000314759 OTUD6AQ7L8S5 288 aa14.43□□□□□ -0.1
SKA3-202ENST00000314759 MGARPQ8TDB4 240 aa14.43□□□□□ -0.1
SKA3-202ENST00000314759 BTBD6Q96KE9 485 aa14.43□□□□□ -0.1
SKA3-202ENST00000314759 COA1Q9GZY4 146 aa14.43□□□□□ -0.1
SKA3-202ENST00000314759 SEL1LQ9UBV2 794 aa14.43□□□□□ -0.1
SKA3-202ENST00000314759 UBE4BO95155 1302 aa14.43□□□□□ -0.1
SKA3-202ENST00000314759 EMSYQ7Z589 1322 aa14.43□□□□□ -0.1
SKA3-202ENST00000314759 EIF4E1BA6NMX2 242 aaKnown RBP14.43□□□□□ -0.1
SKA3-202ENST00000314759 PSMD10O75832 226 aa14.43□□□□□ -0.1
SKA3-202ENST00000314759 CACNB3P54284 484 aa14.43□□□□□ -0.1
SKA3-202ENST00000314759 TCP10Q12799 353 aa14.43□□□□□ -0.1
SKA3-202ENST00000314759 CYFIP1Q7L576 1253 aa14.43□□□□□ -0.1
SKA3-202ENST00000314759 ZNF483Q8TF39 744 aaPredicted RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms