RNA–Protein interactions for RNA: ENST00000314567.7

CDPF1-201, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDPF1, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-201ENST00000314567 KCNG1Q9UIX4 513 aa27.17■■□□□ 1.94
CDPF1-201ENST00000314567 EXOC7Q9UPT5 735 aa27.17■■□□□ 1.94
CDPF1-201ENST00000314567 PPME1Q9Y570 386 aa27.17■■□□□ 1.94
CDPF1-201ENST00000314567 EPN1Q9Y6I3 576 aaPredicted RBP27.17■■□□□ 1.94
CDPF1-201ENST00000314567 COL1A2P08123 1366 aa27.16■■□□□ 1.94
CDPF1-201ENST00000314567 CST5P28325 142 aaPredicted RBP27.16■■□□□ 1.94
CDPF1-201ENST00000314567 NBPF20Q3BBV1 942 aa27.16■■□□□ 1.94
CDPF1-201ENST00000314567 CCDC155Q8N6L0 562 aa27.16■■□□□ 1.94
CDPF1-201ENST00000314567 EPHB6O15197 1021 aa27.15■■□□□ 1.94
CDPF1-201ENST00000314567 ZEB2O60315 1214 aa27.15■■□□□ 1.94
CDPF1-201ENST00000314567 NDUFA10O95299 355 aa27.15■■□□□ 1.94
CDPF1-201ENST00000314567 CYLC1P35663 651 aaPredicted RBP27.15■■□□□ 1.94
CDPF1-201ENST00000314567 CAPSQ13938 189 aa27.15■■□□□ 1.94
CDPF1-201ENST00000314567 PPP2R5AQ15172 486 aa27.15■■□□□ 1.94
CDPF1-201ENST00000314567 TRIM65Q6PJ69 517 aa27.15■■□□□ 1.94
CDPF1-201ENST00000314567 CACNA2D4Q7Z3S7 1137 aa27.15■■□□□ 1.94
CDPF1-201ENST00000314567 RNF180Q86T96 592 aa27.15■■□□□ 1.94
CDPF1-201ENST00000314567 RHPN2Q8IUC4 686 aa27.15■■□□□ 1.94
CDPF1-201ENST00000314567 TMEM161BQ8NDZ6 487 aa27.15■■□□□ 1.94
CDPF1-201ENST00000314567 SLC35C1Q96A29 364 aa27.15■■□□□ 1.94
CDPF1-201ENST00000314567 IFT74Q96LB3 600 aa27.15■■□□□ 1.94
CDPF1-201ENST00000314567 NTPCRQ9BSD7 190 aaKnown RBP27.15■■□□□ 1.94
CDPF1-201ENST00000314567 KATNAL1Q9BW62 490 aa27.15■■□□□ 1.94
CDPF1-201ENST00000314567 LSM14BQ9BX40 385 aaKnown RBP27.15■■□□□ 1.94
CDPF1-201ENST00000314567 GTPBP10A4D1E9 387 aaKnown RBP27.15■■□□□ 1.94
CDPF1-201ENST00000314567 LRRIQ4A6NIV6 560 aa27.15■■□□□ 1.94
CDPF1-201ENST00000314567 MSCO60682 206 aa27.15■■□□□ 1.94
CDPF1-201ENST00000314567 KPNA6O60684 536 aa27.15■■□□□ 1.94
CDPF1-201ENST00000314567 CCL5P13501 91 aa27.15■■□□□ 1.94
CDPF1-201ENST00000314567 CTCFP49711 727 aaPredicted RBP27.15■■□□□ 1.94
CDPF1-201ENST00000314567 LAMTOR4Q0VGL1 99 aa27.15■■□□□ 1.94
CDPF1-201ENST00000314567 DCAF17Q5H9S7 520 aaPredicted RBP27.15■■□□□ 1.94
CDPF1-201ENST00000314567 NFRKBQ6P4R8 1299 aa27.15■■□□□ 1.94
CDPF1-201ENST00000314567 LINC01465Q8N7H1 131 aa27.15■■□□□ 1.94
CDPF1-201ENST00000314567 C7orf31Q8N865 590 aa27.15■■□□□ 1.94
CDPF1-201ENST00000314567 BAP1Q92560 729 aa27.15■■□□□ 1.94
CDPF1-201ENST00000314567 DEFB118Q96PH6 123 aa27.15■■□□□ 1.94
CDPF1-201ENST00000314567 USP20Q9Y2K6 914 aa27.15■■□□□ 1.94
CDPF1-201ENST00000314567 NRCAMQ92823 1304 aa27.14■■□□□ 1.94
CDPF1-201ENST00000314567 UQCRHLA0A096LP55 91 aa27.14■■□□□ 1.94
CDPF1-201ENST00000314567 H0YCG3 227 aa27.14■■□□□ 1.94
CDPF1-201ENST00000314567 TREHO43280 583 aa27.14■■□□□ 1.94
CDPF1-201ENST00000314567 VTNP04004 478 aa27.14■■□□□ 1.94
CDPF1-201ENST00000314567 UQCRHP07919 91 aa27.14■■□□□ 1.94
CDPF1-201ENST00000314567 SRGAP2CP0DJJ0 459 aa27.14■■□□□ 1.94
CDPF1-201ENST00000314567 IER5Q5VY09 327 aa27.14■■□□□ 1.94
CDPF1-201ENST00000314567 SYT10Q6XYQ8 523 aa27.14■■□□□ 1.94
CDPF1-201ENST00000314567 RUFY4Q6ZNE9 571 aa27.14■■□□□ 1.94
CDPF1-201ENST00000314567 PSPC1Q8WXF1 523 aaKnown RBP27.14■■□□□ 1.94
CDPF1-201ENST00000314567 RNF208Q9H0X6 261 aa27.14■■□□□ 1.94
CDPF1-201ENST00000314567 PLCB1Q9NQ66 1216 aa27.14■■□□□ 1.94
CDPF1-201ENST00000314567 GRIN2DO15399 1336 aa27.14■■□□□ 1.93
CDPF1-201ENST00000314567 SCP2P22307 547 aa27.13■■□□□ 1.93
CDPF1-201ENST00000314567 GTF2F1P35269 517 aaKnown RBP eCLIP27.13■■□□□ 1.93
CDPF1-201ENST00000314567 CYP2J2P51589 502 aa27.13■■□□□ 1.93
CDPF1-201ENST00000314567 TCERG1LQ5VWI1 586 aa27.13■■□□□ 1.93
CDPF1-201ENST00000314567 PDXDC1Q6P996 788 aa27.13■■□□□ 1.93
CDPF1-201ENST00000314567 SYN2Q92777 582 aaPredicted RBP27.13■■□□□ 1.93
CDPF1-201ENST00000314567 PAK6Q9NQU5 681 aaPredicted RBP27.13■■□□□ 1.93
CDPF1-201ENST00000314567 DENND3A2RUS2 1198 aa27.13■■□□□ 1.93
CDPF1-201ENST00000314567 TISP43B9A030 160 aa27.13■■□□□ 1.93
CDPF1-201ENST00000314567 RIOK3O14730 519 aaKnown RBP27.13■■□□□ 1.93
CDPF1-201ENST00000314567 MAGEB2O15479 319 aa27.13■■□□□ 1.93
CDPF1-201ENST00000314567 ACLYP53396 1101 aa27.13■■□□□ 1.93
CDPF1-201ENST00000314567 ADAM17P78536 824 aa27.13■■□□□ 1.93
CDPF1-201ENST00000314567 MAP4K3Q8IVH8 894 aa27.13■■□□□ 1.93
CDPF1-201ENST00000314567 NLRP4Q96MN2 994 aa27.13■■□□□ 1.93
CDPF1-201ENST00000314567 FAM49AQ9H0Q0 323 aaPredicted RBP27.13■■□□□ 1.93
CDPF1-201ENST00000314567 AKT3Q9Y243 479 aa27.13■■□□□ 1.93
CDPF1-201ENST00000314567 RRN3P2A6NIE6 340 aa27.12■■□□□ 1.93
CDPF1-201ENST00000314567 MAPK13O15264 365 aa27.12■■□□□ 1.93
CDPF1-201ENST00000314567 EXOC3O60645 756 aa27.12■■□□□ 1.93
CDPF1-201ENST00000314567 NOL4O94818 638 aa27.12■■□□□ 1.93
CDPF1-201ENST00000314567 KRT83P78385 493 aa27.12■■□□□ 1.93
CDPF1-201ENST00000314567 FAM47CQ5HY64 1035 aa27.12■■□□□ 1.93
CDPF1-201ENST00000314567 TAS1R3Q7RTX0 852 aa27.12■■□□□ 1.93
CDPF1-201ENST00000314567 PCSK9Q8NBP7 692 aaKnown RBP27.12■■□□□ 1.93
CDPF1-201ENST00000314567 ACRBPQ8NEB7 543 aa27.12■■□□□ 1.93
CDPF1-201ENST00000314567 TCP11Q8WWU5 503 aa27.12■■□□□ 1.93
CDPF1-201ENST00000314567 VTI1AQ96AJ9 217 aa27.12■■□□□ 1.93
CDPF1-201ENST00000314567 JPH2Q9BR39 696 aaPredicted RBP27.12■■□□□ 1.93
CDPF1-201ENST00000314567 C17orf102A2RUQ5 167 aa27.11■■□□□ 1.93
CDPF1-201ENST00000314567 LRRC53A6NM62 1247 aa27.11■■□□□ 1.93
CDPF1-201ENST00000314567 NAMPTP43490 491 aa27.11■■□□□ 1.93
CDPF1-201ENST00000314567 TMEM62Q0P6H9 643 aa27.11■■□□□ 1.93
CDPF1-201ENST00000314567 EXOC3L4Q17RC7 722 aa27.11■■□□□ 1.93
CDPF1-201ENST00000314567 GBP6Q6ZN66 633 aa27.11■■□□□ 1.93
CDPF1-201ENST00000314567 RRAGAQ7L523 313 aa27.11■■□□□ 1.93
CDPF1-201ENST00000314567 KIAA0319LQ8IZA0 1049 aa27.11■■□□□ 1.93
CDPF1-201ENST00000314567 RNF149Q8NC42 400 aa27.11■■□□□ 1.93
CDPF1-201ENST00000314567 KCNN1Q92952 543 aa27.11■■□□□ 1.93
CDPF1-201ENST00000314567 NHEJ1Q9H9Q4 299 aaPredicted RBP27.11■■□□□ 1.93
CDPF1-201ENST00000314567 ARHGAP28Q9P2N2 729 aa27.11■■□□□ 1.93
CDPF1-201ENST00000314567 TBX20Q9UMR3 447 aa27.11■■□□□ 1.93
CDPF1-201ENST00000314567 EIF3CLB5ME19 914 aaKnown RBP27.1■■□□□ 1.93
CDPF1-201ENST00000314567 GAS2O43903 313 aaKnown RBP27.1■■□□□ 1.93
CDPF1-201ENST00000314567 IPO7O95373 1038 aaKnown RBP27.1■■□□□ 1.93
CDPF1-201ENST00000314567 GDF6Q6KF10 455 aaPredicted RBP27.1■■□□□ 1.93
CDPF1-201ENST00000314567 FBXO46Q6PJ61 603 aaPredicted RBP27.1■■□□□ 1.93
CDPF1-201ENST00000314567 EXOC8Q8IYI6 725 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms