RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 TAS1R3Q7RTX0 852 aa13.45□□□□□ -0.26
RNF4-201ENST00000314289 RNF10Q8N5U6 811 aaKnown RBP13.45□□□□□ -0.26
RNF4-201ENST00000314289 OLIG1Q8TAK6 271 aa13.45□□□□□ -0.26
RNF4-201ENST00000314289 CDCA5Q96FF9 252 aa13.45□□□□□ -0.26
RNF4-201ENST00000314289 ZBTB45Q96K62 511 aaPredicted RBP13.45□□□□□ -0.26
RNF4-201ENST00000314289 BZW2Q9Y6E2 419 aaKnown RBP13.45□□□□□ -0.26
RNF4-201ENST00000314289 KCNK3O14649 394 aa13.45□□□□□ -0.26
RNF4-201ENST00000314289 H2AFZP0C0S5 128 aa13.45□□□□□ -0.26
RNF4-201ENST00000314289 MAPTP10636 758 aaKnown RBP13.45□□□□□ -0.26
RNF4-201ENST00000314289 IREB2P48200 963 aaKnown RBP13.45□□□□□ -0.26
RNF4-201ENST00000314289 ACOT2P49753 483 aa13.45□□□□□ -0.26
RNF4-201ENST00000314289 EMC2Q15006 297 aa13.45□□□□□ -0.26
RNF4-201ENST00000314289 H2AFVQ71UI9 128 aa13.45□□□□□ -0.26
RNF4-201ENST00000314289 VPS36Q86VN1 386 aa13.45□□□□□ -0.26
RNF4-201ENST00000314289 MAP4K3Q8IVH8 894 aa13.45□□□□□ -0.26
RNF4-201ENST00000314289 DHX38Q92620 1227 aaKnown RBP13.45□□□□□ -0.26
RNF4-201ENST00000314289 ATP6V0A4Q9HBG4 840 aa13.45□□□□□ -0.26
RNF4-201ENST00000314289 SYNGAP1Q96PV0 1343 aa13.45□□□□□ -0.26
RNF4-201ENST00000314289 DGAT1O75907 488 aa13.44□□□□□ -0.26
RNF4-201ENST00000314289 WNT7BP56706 349 aa13.44□□□□□ -0.26
RNF4-201ENST00000314289 GOLGA6L1Q8N7Z2 621 aa13.44□□□□□ -0.26
RNF4-201ENST00000314289 ASAP3Q8TDY4 903 aa13.44□□□□□ -0.26
RNF4-201ENST00000314289 TAS1R2Q8TE23 839 aa13.44□□□□□ -0.26
RNF4-201ENST00000314289 CDHR1Q96JP9 859 aa13.44□□□□□ -0.26
RNF4-201ENST00000314289 SENP7Q9BQF6 1050 aa13.44□□□□□ -0.26
RNF4-201ENST00000314289 PTPRFP10586 1907 aa13.44□□□□□ -0.26
RNF4-201ENST00000314289 ZSCAN5CA6NGD5 496 aaPredicted RBP13.44□□□□□ -0.26
RNF4-201ENST00000314289 ARIH2O95376 493 aa13.44□□□□□ -0.26
RNF4-201ENST00000314289 CYP2C8P10632 490 aa13.44□□□□□ -0.26
RNF4-201ENST00000314289 TCP1P17987 556 aaKnown RBP13.44□□□□□ -0.26
RNF4-201ENST00000314289 CHST13Q8NET6 341 aa13.44□□□□□ -0.26
RNF4-201ENST00000314289 FAM71BQ8TC56 605 aa13.44□□□□□ -0.26
RNF4-201ENST00000314289 KIFAP3Q92845 792 aa13.44□□□□□ -0.26
RNF4-201ENST00000314289 OPTNQ96CV9 577 aa13.44□□□□□ -0.26
RNF4-201ENST00000314289 ARHGEF26Q96DR7 871 aa13.44□□□□□ -0.26
RNF4-201ENST00000314289 ANKFY1Q9P2R3 1169 aa13.44□□□□□ -0.26
RNF4-201ENST00000314289 FBXL5Q9UKA1 691 aa13.44□□□□□ -0.26
RNF4-201ENST00000314289 PCDHGC5Q9Y5F6 944 aa13.44□□□□□ -0.26
RNF4-201ENST00000314289 ESYT3A0FGR9 886 aa13.43□□□□□ -0.26
RNF4-201ENST00000314289 GGPS1O95749 300 aa13.43□□□□□ -0.26
RNF4-201ENST00000314289 TNFAIP3P21580 790 aa13.43□□□□□ -0.26
RNF4-201ENST00000314289 ALCAMQ13740 583 aa13.43□□□□□ -0.26
RNF4-201ENST00000314289 ZBTB41Q5SVQ8 909 aa13.43□□□□□ -0.26
RNF4-201ENST00000314289 MEI1Q5TIA1 1274 aa13.43□□□□□ -0.26
RNF4-201ENST00000314289 DAAM2Q86T65 1068 aa13.43□□□□□ -0.26
RNF4-201ENST00000314289 THAP2Q9H0W7 228 aa13.43□□□□□ -0.26
RNF4-201ENST00000314289 WDR90Q96KV7 1748 aa13.43□□□□□ -0.26
RNF4-201ENST00000314289 MCM3APO60318 1980 aa13.43□□□□□ -0.26
RNF4-201ENST00000314289 CYP26A1O43174 497 aa13.43□□□□□ -0.26
RNF4-201ENST00000314289 ATMINO43313 823 aaPredicted RBP13.43□□□□□ -0.26
RNF4-201ENST00000314289 RNF40O75150 1001 aa13.43□□□□□ -0.26
RNF4-201ENST00000314289 SGPL1O95470 568 aa13.43□□□□□ -0.26
RNF4-201ENST00000314289 POTEJP0CG39 1038 aa13.43□□□□□ -0.26
RNF4-201ENST00000314289 PAFAH1B1P43034 410 aa13.43□□□□□ -0.26
RNF4-201ENST00000314289 CETN1Q12798 172 aa13.43□□□□□ -0.26
RNF4-201ENST00000314289 EPC2Q52LR7 807 aa13.43□□□□□ -0.26
RNF4-201ENST00000314289 XKR3Q5GH77 459 aa13.43□□□□□ -0.26
RNF4-201ENST00000314289 RIOX2Q8IUF8 465 aa13.43□□□□□ -0.26
RNF4-201ENST00000314289 PARD3BQ8TEW8 1205 aa13.43□□□□□ -0.26
RNF4-201ENST00000314289 COPS5Q92905 334 aa13.43□□□□□ -0.26
RNF4-201ENST00000314289 IFT74Q96LB3 600 aa13.43□□□□□ -0.26
RNF4-201ENST00000314289 PCYT2Q99447 389 aa13.43□□□□□ -0.26
RNF4-201ENST00000314289 EXOC7Q9UPT5 735 aa13.43□□□□□ -0.26
RNF4-201ENST00000314289 GSTTP1A0A1W2PQM5 241 aa13.43□□□□□ -0.26
RNF4-201ENST00000314289 TTLL13PA6NNM8 815 aa13.43□□□□□ -0.26
RNF4-201ENST00000314289 OATP04181 439 aa13.43□□□□□ -0.26
RNF4-201ENST00000314289 HSDL1Q3SXM5 330 aa13.43□□□□□ -0.26
RNF4-201ENST00000314289 SCARA3Q6AZY7 606 aa13.43□□□□□ -0.26
RNF4-201ENST00000314289 LRRC31Q6UY01 552 aa13.43□□□□□ -0.26
RNF4-201ENST00000314289 SLC47A2Q86VL8 602 aa13.43□□□□□ -0.26
RNF4-201ENST00000314289 FBXO16Q8IX29 292 aaPredicted RBP13.43□□□□□ -0.26
RNF4-201ENST00000314289 RDM1Q8NG50 284 aa13.43□□□□□ -0.26
RNF4-201ENST00000314289 RIN2Q8WYP3 895 aaPredicted RBP13.43□□□□□ -0.26
RNF4-201ENST00000314289 TATDN2Q93075 761 aa13.43□□□□□ -0.26
RNF4-201ENST00000314289 KREMEN1Q96MU8 473 aa13.43□□□□□ -0.26
RNF4-201ENST00000314289 ACBD3Q9H3P7 528 aa13.43□□□□□ -0.26
RNF4-201ENST00000314289 PDLIM7Q9NR12 457 aa13.43□□□□□ -0.26
RNF4-201ENST00000314289 OTOFQ9HC10 1997 aa13.42□□□□□ -0.26
RNF4-201ENST00000314289 NFASCO94856 1347 aa13.42□□□□□ -0.26
RNF4-201ENST00000314289 CNMDO75829 334 aa13.42□□□□□ -0.26
RNF4-201ENST00000314289 FARP2O94887 1054 aaPredicted RBP13.42□□□□□ -0.26
RNF4-201ENST00000314289 EDN1P05305 212 aa13.42□□□□□ -0.26
RNF4-201ENST00000314289 TCF7P36402 384 aaPredicted RBP13.42□□□□□ -0.26
RNF4-201ENST00000314289 LIG4P49917 911 aa13.42□□□□□ -0.26
RNF4-201ENST00000314289 KLHL7Q8IXQ5 586 aa13.42□□□□□ -0.26
RNF4-201ENST00000314289 ANKRD13AQ8IZ07 590 aa13.42□□□□□ -0.26
RNF4-201ENST00000314289 MCPH1Q8NEM0 835 aa13.42□□□□□ -0.26
RNF4-201ENST00000314289 DNERQ8NFT8 737 aa13.42□□□□□ -0.26
RNF4-201ENST00000314289 TPCN2Q8NHX9 752 aa13.42□□□□□ -0.26
RNF4-201ENST00000314289 SLC30A5Q8TAD4 765 aa13.42□□□□□ -0.26
RNF4-201ENST00000314289 SLC35G2Q8TBE7 412 aa13.42□□□□□ -0.26
RNF4-201ENST00000314289 IWS1Q96ST2 819 aa13.42□□□□□ -0.26
RNF4-201ENST00000314289 ST6GALNAC4Q9H4F1 302 aa13.42□□□□□ -0.26
RNF4-201ENST00000314289 RBPJLQ9UBG7 517 aa13.42□□□□□ -0.26
RNF4-201ENST00000314289 DICER1Q9UPY3 1922 aaKnown RBP13.42□□□□□ -0.26
RNF4-201ENST00000314289 A0A0G2JLL6 359 aaPredicted RBP13.42□□□□□ -0.26
RNF4-201ENST00000314289 GLRA2P23416 452 aa13.42□□□□□ -0.26
RNF4-201ENST00000314289 SSTR3P32745 418 aaPredicted RBP13.42□□□□□ -0.26
RNF4-201ENST00000314289 RPS6KA1Q15418 735 aa13.42□□□□□ -0.26
RNF4-201ENST00000314289 GJC2Q5T442 439 aaPredicted RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms