RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 PCDHA1Q9Y5I3 950 aa15.75■□□□□ 0.11
COL6A2-202ENST00000310645 SYT2Q8N9I0 419 aaPredicted RBP15.75■□□□□ 0.11
COL6A2-202ENST00000310645 ATG4AQ8WYN0 398 aa15.75■□□□□ 0.11
COL6A2-202ENST00000310645 MRRFQ96E11 262 aaKnown RBP15.75■□□□□ 0.11
COL6A2-202ENST00000310645 SH3GL3Q99963 347 aa15.75■□□□□ 0.11
COL6A2-202ENST00000310645 TMEM109Q9BVC6 243 aa15.75■□□□□ 0.11
COL6A2-202ENST00000310645 DPPA5A6NC42 116 aa15.74■□□□□ 0.11
COL6A2-202ENST00000310645 CLDN3O15551 220 aa15.74■□□□□ 0.11
COL6A2-202ENST00000310645 SMIM24O75264 130 aa15.74■□□□□ 0.11
COL6A2-202ENST00000310645 SPAG7O75391 227 aa15.74■□□□□ 0.11
COL6A2-202ENST00000310645 LUC7L3O95232 432 aaKnown RBP15.74■□□□□ 0.11
COL6A2-202ENST00000310645 GJB6O95452 261 aa15.74■□□□□ 0.11
COL6A2-202ENST00000310645 ZNF543Q08ER8 600 aa15.74■□□□□ 0.11
COL6A2-202ENST00000310645 ASRGL1Q7L266 308 aa15.74■□□□□ 0.11
COL6A2-202ENST00000310645 EPM2AIP1Q7L775 607 aaPredicted RBP15.74■□□□□ 0.11
COL6A2-202ENST00000310645 UTP4Q969X6 686 aaKnown RBP15.74■□□□□ 0.11
COL6A2-202ENST00000310645 MYLK2Q9H1R3 596 aa15.74■□□□□ 0.11
COL6A2-202ENST00000310645 ZBTB39O15060 712 aa15.74■□□□□ 0.11
COL6A2-202ENST00000310645 SPATA31C1P0DKV0 1188 aa15.74■□□□□ 0.11
COL6A2-202ENST00000310645 TAL1P17542 331 aaPredicted RBP15.74■□□□□ 0.11
COL6A2-202ENST00000310645 CLK2P49760 499 aaKnown RBP15.74■□□□□ 0.11
COL6A2-202ENST00000310645 MXRA7P84157 204 aa15.74■□□□□ 0.11
COL6A2-202ENST00000310645 KRT17Q04695 432 aa15.74■□□□□ 0.11
COL6A2-202ENST00000310645 NFIXQ14938 502 aa15.74■□□□□ 0.11
COL6A2-202ENST00000310645 RBM26Q5T8P6 1007 aaKnown RBP15.74■□□□□ 0.11
COL6A2-202ENST00000310645 MFSD5Q6N075 450 aa15.74■□□□□ 0.11
COL6A2-202ENST00000310645 CGB2Q6NT52 195 aa15.74■□□□□ 0.11
COL6A2-202ENST00000310645 RNF207Q6ZRF8 634 aa15.74■□□□□ 0.11
COL6A2-202ENST00000310645 SLC13A5Q86YT5 568 aaPredicted RBP15.74■□□□□ 0.11
COL6A2-202ENST00000310645 RHOT2Q8IXI1 618 aa15.74■□□□□ 0.11
COL6A2-202ENST00000310645 RPUSD2Q8IZ73 545 aaKnown RBP15.74■□□□□ 0.11
COL6A2-202ENST00000310645 RNF217Q8TC41 542 aa15.74■□□□□ 0.11
COL6A2-202ENST00000310645 SETDB2Q96T68 719 aa15.74■□□□□ 0.11
COL6A2-202ENST00000310645 MXD3Q9BW11 206 aa15.74■□□□□ 0.11
COL6A2-202ENST00000310645 ROPN1BQ9BZX4 212 aaPredicted RBP15.74■□□□□ 0.11
COL6A2-202ENST00000310645 ROPN1Q9HAT0 212 aaPredicted RBP15.74■□□□□ 0.11
COL6A2-202ENST00000310645 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.74■□□□□ 0.11
COL6A2-202ENST00000310645 PCDHA3Q9Y5H8 950 aa15.74■□□□□ 0.11
COL6A2-202ENST00000310645 GSTTP1A0A1W2PQM5 241 aa15.74■□□□□ 0.11
COL6A2-202ENST00000310645 A0A1W2PRG0 241 aa15.74■□□□□ 0.11
COL6A2-202ENST00000310645 MIF4GDA9UHW6 222 aaKnown RBP15.74■□□□□ 0.11
COL6A2-202ENST00000310645 CHMP2AO43633 222 aa15.74■□□□□ 0.11
COL6A2-202ENST00000310645 UNC5CO95185 931 aa15.74■□□□□ 0.11
COL6A2-202ENST00000310645 SETDB1Q15047 1291 aa15.74■□□□□ 0.11
COL6A2-202ENST00000310645 PHLDB3Q6NSJ2 640 aa15.74■□□□□ 0.11
COL6A2-202ENST00000310645 PRUNE1Q86TP1 453 aa15.74■□□□□ 0.11
COL6A2-202ENST00000310645 SPOCK2Q92563 424 aa15.74■□□□□ 0.11
COL6A2-202ENST00000310645 RAB3IPQ96QF0 476 aaPredicted RBP15.74■□□□□ 0.11
COL6A2-202ENST00000310645 NUDCD1Q96RS6 583 aa15.74■□□□□ 0.11
COL6A2-202ENST00000310645 FAM118BQ9BPY3 351 aa15.74■□□□□ 0.11
COL6A2-202ENST00000310645 APEX2Q9UBZ4 518 aa15.74■□□□□ 0.11
COL6A2-202ENST00000310645 UBAP1LF5GYI3 381 aa15.73■□□□□ 0.11
COL6A2-202ENST00000310645 ZBTB5O15062 677 aa15.73■□□□□ 0.11
COL6A2-202ENST00000310645 SLC16A3O15427 465 aaKnown RBP15.73■□□□□ 0.11
COL6A2-202ENST00000310645 HSPA6P17066 643 aa15.73■□□□□ 0.11
COL6A2-202ENST00000310645 ATP4AP20648 1035 aa15.73■□□□□ 0.11
COL6A2-202ENST00000310645 CTNNA2P26232 953 aa15.73■□□□□ 0.11
COL6A2-202ENST00000310645 MYL7Q01449 175 aa15.73■□□□□ 0.11
COL6A2-202ENST00000310645 DNAJC3Q13217 504 aa15.73■□□□□ 0.11
COL6A2-202ENST00000310645 KIAA0825Q8IV33 1275 aa15.73■□□□□ 0.11
COL6A2-202ENST00000310645 C9orf72Q96LT7 481 aa15.73■□□□□ 0.11
COL6A2-202ENST00000310645 GPR88Q9GZN0 384 aa15.73■□□□□ 0.11
COL6A2-202ENST00000310645 FRMD4BQ9Y2L6 1034 aa15.73■□□□□ 0.11
COL6A2-202ENST00000310645 O00370 1275 aa15.73■□□□□ 0.11
COL6A2-202ENST00000310645 GPC5P78333 572 aa15.73■□□□□ 0.11
COL6A2-202ENST00000310645 SGO2Q562F6 1265 aa15.73■□□□□ 0.11
COL6A2-202ENST00000310645 TNFAIP8L3Q5GJ75 292 aa15.73■□□□□ 0.11
COL6A2-202ENST00000310645 TRMT10CQ7L0Y3 403 aaKnown RBP15.73■□□□□ 0.11
COL6A2-202ENST00000310645 ANKLE1Q8NAG6 615 aa15.73■□□□□ 0.11
COL6A2-202ENST00000310645 SERPINB12Q96P63 405 aa15.73■□□□□ 0.11
COL6A2-202ENST00000310645 AAASQ9NRG9 546 aa15.73■□□□□ 0.11
COL6A2-202ENST00000310645 RABGAP1Q9Y3P9 1069 aa15.73■□□□□ 0.11
COL6A2-202ENST00000310645 ATP5DP30049 168 aa15.72■□□□□ 0.11
COL6A2-202ENST00000310645 FOXN2P32314 431 aa15.72■□□□□ 0.11
COL6A2-202ENST00000310645 NT5C2P49902 561 aa15.72■□□□□ 0.11
COL6A2-202ENST00000310645 CYP4F22Q6NT55 531 aa15.72■□□□□ 0.11
COL6A2-202ENST00000310645 MIGA2Q7L4E1 593 aa15.72■□□□□ 0.11
COL6A2-202ENST00000310645 PHLDB2Q86SQ0 1253 aa15.72■□□□□ 0.11
COL6A2-202ENST00000310645 TPH2Q8IWU9 490 aa15.72■□□□□ 0.11
COL6A2-202ENST00000310645 DNAJC18Q9H819 358 aa15.72■□□□□ 0.11
COL6A2-202ENST00000310645 SCN7AQ01118 1682 aa15.72■□□□□ 0.11
COL6A2-202ENST00000310645 KCNQ2O43526 872 aa15.72■□□□□ 0.11
COL6A2-202ENST00000310645 EXOC3O60645 756 aa15.72■□□□□ 0.11
COL6A2-202ENST00000310645 TOM1O60784 492 aa15.72■□□□□ 0.11
COL6A2-202ENST00000310645 TTLL1O95922 423 aa15.72■□□□□ 0.11
COL6A2-202ENST00000310645 TMED2Q15363 201 aa15.72■□□□□ 0.11
COL6A2-202ENST00000310645 C11orf91Q3C1V1 193 aa15.72■□□□□ 0.11
COL6A2-202ENST00000310645 USH1GQ495M9 461 aa15.72■□□□□ 0.11
COL6A2-202ENST00000310645 CLEC4GQ6UXB4 293 aa15.72■□□□□ 0.11
COL6A2-202ENST00000310645 SLFN12Q8IYM2 578 aa15.72■□□□□ 0.11
COL6A2-202ENST00000310645 CYP2W1Q8TAV3 490 aa15.72■□□□□ 0.11
COL6A2-202ENST00000310645 PCIF1Q9H4Z3 704 aa15.72■□□□□ 0.11
COL6A2-202ENST00000310645 SPDYE5A6NIY4 337 aa15.72■□□□□ 0.11
COL6A2-202ENST00000310645 CETPP11597 493 aa15.72■□□□□ 0.11
COL6A2-202ENST00000310645 RPA1P27694 616 aa15.72■□□□□ 0.11
COL6A2-202ENST00000310645 TUBP50607 506 aa15.72■□□□□ 0.11
COL6A2-202ENST00000310645 INHBEP58166 350 aa15.72■□□□□ 0.11
COL6A2-202ENST00000310645 ARHGAP4P98171 946 aa15.72■□□□□ 0.11
COL6A2-202ENST00000310645 CLUL1Q15846 466 aa15.72■□□□□ 0.11
COL6A2-202ENST00000310645 CAPN12Q6ZSI9 719 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms