RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 CARD9Q9H257 536 aa19.34■□□□□ 0.69
SPSB4-201ENST00000310546 CTTNBP2NLQ9P2B4 639 aa19.34■□□□□ 0.69
SPSB4-201ENST00000310546 BIN2Q9UBW5 565 aaPredicted RBP19.34■□□□□ 0.69
SPSB4-201ENST00000310546 ANKRD63C9JTQ0 380 aa19.34■□□□□ 0.69
SPSB4-201ENST00000310546 HHATQ5VTY9 493 aa19.34■□□□□ 0.69
SPSB4-201ENST00000310546 GLYCTKQ8IVS8 523 aa19.34■□□□□ 0.69
SPSB4-201ENST00000310546 NLGN1Q8N2Q7 840 aa19.34■□□□□ 0.69
SPSB4-201ENST00000310546 DYNLL2Q96FJ2 89 aa19.34■□□□□ 0.69
SPSB4-201ENST00000310546 ZNF333Q96JL9 665 aa19.34■□□□□ 0.69
SPSB4-201ENST00000310546 OCEL1Q9H607 264 aa19.34■□□□□ 0.69
SPSB4-201ENST00000310546 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.34■□□□□ 0.69
SPSB4-201ENST00000310546 A0A0A6YYK5 440 aaPredicted RBP19.33■□□□□ 0.69
SPSB4-201ENST00000310546 SMCO2A6NFE2 343 aa19.33■□□□□ 0.69
SPSB4-201ENST00000310546 ATP9AO75110 1047 aa19.33■□□□□ 0.69
SPSB4-201ENST00000310546 BAG3O95817 575 aa19.33■□□□□ 0.69
SPSB4-201ENST00000310546 PCP11498 1178 aaKnown RBP19.33■□□□□ 0.69
SPSB4-201ENST00000310546 CACNA2D1P54289 1103 aa19.33■□□□□ 0.69
SPSB4-201ENST00000310546 GALNT17Q6IS24 598 aa19.33■□□□□ 0.69
SPSB4-201ENST00000310546 CCDC137Q6PK04 289 aaKnown RBP19.33■□□□□ 0.69
SPSB4-201ENST00000310546 KRT25Q7Z3Z0 450 aa19.33■□□□□ 0.69
SPSB4-201ENST00000310546 SRRM1Q8IYB3 904 aaKnown RBP19.33■□□□□ 0.69
SPSB4-201ENST00000310546 CCDC105Q8IYK2 499 aa19.33■□□□□ 0.69
SPSB4-201ENST00000310546 DAGLBQ8NCG7 672 aa19.33■□□□□ 0.69
SPSB4-201ENST00000310546 CDC42EP4Q9H3Q1 356 aaKnown RBP19.33■□□□□ 0.69
SPSB4-201ENST00000310546 CD209Q9NNX6 404 aa19.33■□□□□ 0.69
SPSB4-201ENST00000310546 MCM9Q9NXL9 1143 aa19.33■□□□□ 0.69
SPSB4-201ENST00000310546 NKIRAS1Q9NYS0 192 aa19.33■□□□□ 0.69
SPSB4-201ENST00000310546 PARP2Q9UGN5 583 aa19.33■□□□□ 0.69
SPSB4-201ENST00000310546 SEC63Q9UGP8 760 aaKnown RBP19.33■□□□□ 0.69
SPSB4-201ENST00000310546 AJAP1Q9UKB5 411 aaPredicted RBP19.33■□□□□ 0.69
SPSB4-201ENST00000310546 CHKBQ9Y259 395 aa19.33■□□□□ 0.69
SPSB4-201ENST00000310546 LRCH1Q9Y2L9 728 aa19.33■□□□□ 0.69
SPSB4-201ENST00000310546 IGSF9BQ9UPX0 1349 aa19.33■□□□□ 0.68
SPSB4-201ENST00000310546 LDHBP07195 334 aaKnown RBP19.33■□□□□ 0.68
SPSB4-201ENST00000310546 NR2F2P24468 414 aa19.33■□□□□ 0.68
SPSB4-201ENST00000310546 PON1P27169 355 aa19.33■□□□□ 0.68
SPSB4-201ENST00000310546 DYNC1I2Q13409 638 aaKnown RBP19.33■□□□□ 0.68
SPSB4-201ENST00000310546 KRT79Q5XKE5 535 aa19.33■□□□□ 0.68
SPSB4-201ENST00000310546 TTC27Q6P3X3 843 aa19.33■□□□□ 0.68
SPSB4-201ENST00000310546 MAPKAPK5Q8IW41 473 aa19.33■□□□□ 0.68
SPSB4-201ENST00000310546 SH3RF3Q8TEJ3 882 aaPredicted RBP19.33■□□□□ 0.68
SPSB4-201ENST00000310546 IFT43Q96FT9 208 aa19.33■□□□□ 0.68
SPSB4-201ENST00000310546 NT5C3AQ9H0P0 336 aa19.33■□□□□ 0.68
SPSB4-201ENST00000310546 SEPT11Q9NVA2 429 aaKnown RBP19.33■□□□□ 0.68
SPSB4-201ENST00000310546 CCDC88AQ3V6T2 1871 aa19.33■□□□□ 0.68
SPSB4-201ENST00000310546 IRS2Q9Y4H2 1338 aa19.32■□□□□ 0.68
SPSB4-201ENST00000310546 G3V3G9 751 aa19.32■□□□□ 0.68
SPSB4-201ENST00000310546 PTGIRP43119 386 aa19.32■□□□□ 0.68
SPSB4-201ENST00000310546 SCNN1BP51168 640 aa19.32■□□□□ 0.68
SPSB4-201ENST00000310546 POLGP54098 1239 aaPredicted RBP19.32■□□□□ 0.68
SPSB4-201ENST00000310546 TFAP4Q01664 338 aa19.32■□□□□ 0.68
SPSB4-201ENST00000310546 CCDC15Q0P6D6 951 aa19.32■□□□□ 0.68
SPSB4-201ENST00000310546 CRY2Q49AN0 593 aa19.32■□□□□ 0.68
SPSB4-201ENST00000310546 KHDC1Q4VXA5 237 aaKnown RBP19.32■□□□□ 0.68
SPSB4-201ENST00000310546 CMPK2Q5EBM0 449 aa19.32■□□□□ 0.68
SPSB4-201ENST00000310546 DCAF8Q5TAQ9 597 aa19.32■□□□□ 0.68
SPSB4-201ENST00000310546 SNX30Q5VWJ9 437 aa19.32■□□□□ 0.68
SPSB4-201ENST00000310546 SLC44A5Q8NCS7 719 aa19.32■□□□□ 0.68
SPSB4-201ENST00000310546 CTNNBL1Q8WYA6 563 aaPredicted RBP19.32■□□□□ 0.68
SPSB4-201ENST00000310546 RUNDC3BQ96NL0 473 aa19.32■□□□□ 0.68
SPSB4-201ENST00000310546 GBP5Q96PP8 586 aa19.32■□□□□ 0.68
SPSB4-201ENST00000310546 ROPN1BQ9BZX4 212 aaPredicted RBP19.32■□□□□ 0.68
SPSB4-201ENST00000310546 TAOK3Q9H2K8 898 aa19.32■□□□□ 0.68
SPSB4-201ENST00000310546 DCLRE1BQ9H816 532 aa19.32■□□□□ 0.68
SPSB4-201ENST00000310546 ROPN1Q9HAT0 212 aaPredicted RBP19.32■□□□□ 0.68
SPSB4-201ENST00000310546 USP40Q9NVE5 1235 aa19.32■□□□□ 0.68
SPSB4-201ENST00000310546 STOML1Q9UBI4 398 aa19.32■□□□□ 0.68
SPSB4-201ENST00000310546 MAD2L2Q9UI95 211 aa19.32■□□□□ 0.68
SPSB4-201ENST00000310546 ATP5HO75947 161 aa19.32■□□□□ 0.68
SPSB4-201ENST00000310546 GSTT1P30711 240 aa19.32■□□□□ 0.68
SPSB4-201ENST00000310546 KCNJ1P48048 391 aa19.32■□□□□ 0.68
SPSB4-201ENST00000310546 SCNN1DP51172 638 aa19.32■□□□□ 0.68
SPSB4-201ENST00000310546 MKRN3Q13064 507 aaKnown RBP19.32■□□□□ 0.68
SPSB4-201ENST00000310546 LLGL1Q15334 1064 aa19.32■□□□□ 0.68
SPSB4-201ENST00000310546 TMEM266Q2M3C6 531 aa19.32■□□□□ 0.68
SPSB4-201ENST00000310546 ZC2HC1CQ53FD0 456 aaPredicted RBP19.32■□□□□ 0.68
SPSB4-201ENST00000310546 HERC4Q5GLZ8 1057 aaPredicted RBP19.32■□□□□ 0.68
SPSB4-201ENST00000310546 RASIP1Q5U651 963 aa19.32■□□□□ 0.68
SPSB4-201ENST00000310546 PRELID2Q8N945 189 aa19.32■□□□□ 0.68
SPSB4-201ENST00000310546 TGFBRAP1Q8WUH2 860 aa19.32■□□□□ 0.68
SPSB4-201ENST00000310546 TRAPPC9Q96Q05 1148 aa19.32■□□□□ 0.68
SPSB4-201ENST00000310546 UIMC1Q96RL1 719 aa19.32■□□□□ 0.68
SPSB4-201ENST00000310546 DBNDD1Q9H9R9 158 aa19.32■□□□□ 0.68
SPSB4-201ENST00000310546 PITPNM2Q9BZ72 1349 aa19.32■□□□□ 0.68
SPSB4-201ENST00000310546 PODXLO00592 558 aa19.31■□□□□ 0.68
SPSB4-201ENST00000310546 CETN3O15182 167 aa19.31■□□□□ 0.68
SPSB4-201ENST00000310546 PHF2O75151 1096 aa19.31■□□□□ 0.68
SPSB4-201ENST00000310546 SKIP12755 728 aa19.31■□□□□ 0.68
SPSB4-201ENST00000310546 DNAJC3Q13217 504 aa19.31■□□□□ 0.68
SPSB4-201ENST00000310546 MFSD14BQ5SR56 506 aa19.31■□□□□ 0.68
SPSB4-201ENST00000310546 SCG3Q8WXD2 468 aaKnown RBP19.31■□□□□ 0.68
SPSB4-201ENST00000310546 SLC7A6OSQ96CW6 309 aaPredicted RBP19.31■□□□□ 0.68
SPSB4-201ENST00000310546 MAGEB18Q96M61 343 aa19.31■□□□□ 0.68
SPSB4-201ENST00000310546 VAT1LQ9HCJ6 419 aa19.31■□□□□ 0.68
SPSB4-201ENST00000310546 CREB3O43889 395 aa19.31■□□□□ 0.68
SPSB4-201ENST00000310546 TAC1P20366 129 aa19.31■□□□□ 0.68
SPSB4-201ENST00000310546 ATP5DP30049 168 aa19.31■□□□□ 0.68
SPSB4-201ENST00000310546 FOXN2P32314 431 aa19.31■□□□□ 0.68
SPSB4-201ENST00000310546 VHLP40337 213 aa19.31■□□□□ 0.68
SPSB4-201ENST00000310546 NPEPPSP55786 919 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms