RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 CCDC112Q8NEF3 446 aa24.56■■□□□ 1.52
IRF3-201ENST00000309877 ZBTB45Q96K62 511 aaPredicted RBP24.56■■□□□ 1.52
IRF3-201ENST00000309877 FBXL18Q96ME1 805 aa24.56■■□□□ 1.52
IRF3-201ENST00000309877 IFT122Q9HBG6 1241 aa24.56■■□□□ 1.52
IRF3-201ENST00000309877 AGO2Q9UKV8 859 aaKnown RBP24.56■■□□□ 1.52
IRF3-201ENST00000309877 LUC7L2Q9Y383 392 aaKnown RBP24.56■■□□□ 1.52
IRF3-201ENST00000309877 TTC26A0AVF1 554 aa24.55■■□□□ 1.52
IRF3-201ENST00000309877 TULP1O00294 542 aaPredicted RBP24.55■■□□□ 1.52
IRF3-201ENST00000309877 ACKR2O00590 384 aa24.55■■□□□ 1.52
IRF3-201ENST00000309877 EXTL3O43909 919 aa24.55■■□□□ 1.52
IRF3-201ENST00000309877 GRK4P32298 578 aa24.55■■□□□ 1.52
IRF3-201ENST00000309877 NLRP11P59045 1033 aaKnown RBP24.55■■□□□ 1.52
IRF3-201ENST00000309877 CCZ1BP86790 482 aa24.55■■□□□ 1.52
IRF3-201ENST00000309877 CCZ1P86791 482 aaPredicted RBP24.55■■□□□ 1.52
IRF3-201ENST00000309877 KCNMA1Q12791 1236 aa24.55■■□□□ 1.52
IRF3-201ENST00000309877 PRPF4BQ13523 1007 aaKnown RBP24.55■■□□□ 1.52
IRF3-201ENST00000309877 FIGNQ5HY92 759 aa24.55■■□□□ 1.52
IRF3-201ENST00000309877 IFNLR1Q8IU57 520 aaPredicted RBP24.55■■□□□ 1.52
IRF3-201ENST00000309877 KLHDC9Q8NEP7 349 aa24.55■■□□□ 1.52
IRF3-201ENST00000309877 NEK11Q8NG66 645 aa24.55■■□□□ 1.52
IRF3-201ENST00000309877 CCDC51Q96ER9 411 aa24.55■■□□□ 1.52
IRF3-201ENST00000309877 ACO2Q99798 780 aaKnown RBP24.55■■□□□ 1.52
IRF3-201ENST00000309877 FAM213AQ9BRX8 229 aa24.55■■□□□ 1.52
IRF3-201ENST00000309877 CRACR2AQ9BSW2 395 aa24.55■■□□□ 1.52
IRF3-201ENST00000309877 TCHPQ9BT92 498 aa24.55■■□□□ 1.52
IRF3-201ENST00000309877 MSTO1Q9BUK6 570 aa24.55■■□□□ 1.52
IRF3-201ENST00000309877 FAM207AQ9NSI2 230 aaPredicted RBP24.55■■□□□ 1.52
IRF3-201ENST00000309877 PRMT7Q9NVM4 692 aaPredicted RBP24.55■■□□□ 1.52
IRF3-201ENST00000309877 CAPN11Q9UMQ6 739 aa24.55■■□□□ 1.52
IRF3-201ENST00000309877 CLDN3O15551 220 aa24.54■■□□□ 1.52
IRF3-201ENST00000309877 TOM1L1O75674 476 aa24.54■■□□□ 1.52
IRF3-201ENST00000309877 LDHAP00338 332 aaKnown RBP24.54■■□□□ 1.52
IRF3-201ENST00000309877 ADRB2P07550 413 aa24.54■■□□□ 1.52
IRF3-201ENST00000309877 TRIM49P0CI25 452 aa24.54■■□□□ 1.52
IRF3-201ENST00000309877 TRIM49CP0CI26 452 aa24.54■■□□□ 1.52
IRF3-201ENST00000309877 GPC3P51654 580 aa24.54■■□□□ 1.52
IRF3-201ENST00000309877 ADAM17P78536 824 aa24.54■■□□□ 1.52
IRF3-201ENST00000309877 KCNA10Q16322 511 aa24.54■■□□□ 1.52
IRF3-201ENST00000309877 ZNF410Q86VK4 478 aa24.54■■□□□ 1.52
IRF3-201ENST00000309877 PCSK9Q8NBP7 692 aaKnown RBP24.54■■□□□ 1.52
IRF3-201ENST00000309877 PANX2Q96RD6 677 aa24.54■■□□□ 1.52
IRF3-201ENST00000309877 MINDY3Q9H8M7 445 aa24.54■■□□□ 1.52
IRF3-201ENST00000309877 SIP14410 1827 aa24.54■■□□□ 1.52
IRF3-201ENST00000309877 ZNF233A6NK53 670 aa24.53■■□□□ 1.52
IRF3-201ENST00000309877 TREHO43280 583 aa24.53■■□□□ 1.52
IRF3-201ENST00000309877 ASGR1P07306 291 aa24.53■■□□□ 1.52
IRF3-201ENST00000309877 CST5P28325 142 aaPredicted RBP24.53■■□□□ 1.52
IRF3-201ENST00000309877 KRT9P35527 623 aa24.53■■□□□ 1.52
IRF3-201ENST00000309877 FMO5P49326 533 aa24.53■■□□□ 1.52
IRF3-201ENST00000309877 HIC1Q14526 733 aa24.53■■□□□ 1.52
IRF3-201ENST00000309877 GBP6Q6ZN66 633 aa24.53■■□□□ 1.52
IRF3-201ENST00000309877 RUFY4Q6ZNE9 571 aa24.53■■□□□ 1.52
IRF3-201ENST00000309877 USP37Q86T82 979 aa24.53■■□□□ 1.52
IRF3-201ENST00000309877 RNF180Q86T96 592 aa24.53■■□□□ 1.52
IRF3-201ENST00000309877 ZNF397Q8NF99 534 aaPredicted RBP24.53■■□□□ 1.52
IRF3-201ENST00000309877 LSM14BQ9BX40 385 aaKnown RBP24.53■■□□□ 1.52
IRF3-201ENST00000309877 HMX1Q9NP08 348 aaPredicted RBP24.53■■□□□ 1.52
IRF3-201ENST00000309877 PYCARDQ9ULZ3 195 aa24.53■■□□□ 1.52
IRF3-201ENST00000309877 PTCH2Q9Y6C5 1203 aa24.53■■□□□ 1.52
IRF3-201ENST00000309877 EVPLQ92817 2033 aa24.53■■□□□ 1.52
IRF3-201ENST00000309877 A0A0B4J269 797 aa24.53■■□□□ 1.52
IRF3-201ENST00000309877 TTLL13PA6NNM8 815 aa24.53■■□□□ 1.52
IRF3-201ENST00000309877 ZNF200P98182 395 aaPredicted RBP24.53■■□□□ 1.52
IRF3-201ENST00000309877 EXOC3L4Q17RC7 722 aa24.53■■□□□ 1.52
IRF3-201ENST00000309877 TSR1Q2NL82 804 aaKnown RBP24.53■■□□□ 1.52
IRF3-201ENST00000309877 NBPF20Q3BBV1 942 aa24.53■■□□□ 1.52
IRF3-201ENST00000309877 MFSD14AQ96MC6 490 aa24.53■■□□□ 1.52
IRF3-201ENST00000309877 BAG1Q99933 345 aaPredicted RBP24.53■■□□□ 1.52
IRF3-201ENST00000309877 TTYH3Q9C0H2 523 aa24.53■■□□□ 1.52
IRF3-201ENST00000309877 KAT6AQ92794 2004 aa24.52■■□□□ 1.52
IRF3-201ENST00000309877 A0A1W2PQJ5 194 aa24.52■■□□□ 1.52
IRF3-201ENST00000309877 RNF225M0QZC1 329 aaPredicted RBP24.52■■□□□ 1.52
IRF3-201ENST00000309877 HARSP12081 509 aaKnown RBP24.52■■□□□ 1.52
IRF3-201ENST00000309877 CYP24A1Q07973 514 aa24.52■■□□□ 1.52
IRF3-201ENST00000309877 FAM187BQ17R55 369 aa24.52■■□□□ 1.52
IRF3-201ENST00000309877 ATF7IP2Q5U623 682 aa24.52■■□□□ 1.52
IRF3-201ENST00000309877 TSHZ1Q6ZSZ6 1077 aa24.52■■□□□ 1.52
IRF3-201ENST00000309877 SRGAP1Q7Z6B7 1085 aa24.52■■□□□ 1.52
IRF3-201ENST00000309877 TMC2Q8TDI7 906 aa24.52■■□□□ 1.52
IRF3-201ENST00000309877 DNAJB3Q8WWF6 145 aa24.52■■□□□ 1.52
IRF3-201ENST00000309877 HAPLN2Q9GZV7 340 aa24.52■■□□□ 1.52
IRF3-201ENST00000309877 TMX1Q9H3N1 280 aa24.52■■□□□ 1.52
IRF3-201ENST00000309877 GTPBP10A4D1E9 387 aaKnown RBP24.51■■□□□ 1.51
IRF3-201ENST00000309877 STX10O60499 249 aa24.51■■□□□ 1.51
IRF3-201ENST00000309877 CSDE1O75534 798 aaKnown RBP24.51■■□□□ 1.51
IRF3-201ENST00000309877 HOXC8P31273 242 aa24.51■■□□□ 1.51
IRF3-201ENST00000309877 DLG4P78352 724 aa24.51■■□□□ 1.51
IRF3-201ENST00000309877 ZBED6P86452 979 aa24.51■■□□□ 1.51
IRF3-201ENST00000309877 TMEM62Q0P6H9 643 aa24.51■■□□□ 1.51
IRF3-201ENST00000309877 KIZQ2M2Z5 673 aa24.51■■□□□ 1.51
IRF3-201ENST00000309877 ZBTB33Q86T24 672 aa24.51■■□□□ 1.51
IRF3-201ENST00000309877 CCDC127Q96BQ5 260 aa24.51■■□□□ 1.51
IRF3-201ENST00000309877 GCOM2Q9BZD3 368 aaPredicted RBP24.51■■□□□ 1.51
IRF3-201ENST00000309877 ABHD10Q9NUJ1 306 aa24.51■■□□□ 1.51
IRF3-201ENST00000309877 B4GALT5O43286 388 aa24.5■■□□□ 1.51
IRF3-201ENST00000309877 N4BP1O75113 896 aaKnown RBP24.5■■□□□ 1.51
IRF3-201ENST00000309877 IQCF3P0C7M6 154 aa24.5■■□□□ 1.51
IRF3-201ENST00000309877 MYL7Q01449 175 aa24.5■■□□□ 1.51
IRF3-201ENST00000309877 FAM47CQ5HY64 1035 aa24.5■■□□□ 1.51
IRF3-201ENST00000309877 CCSAPQ6IQ19 270 aaPredicted RBP24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms