RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 IDEP14735 1019 aa21.79■■□□□ 1.08
VEGFB-201ENST00000309422 GAP43P17677 238 aa21.79■■□□□ 1.08
VEGFB-201ENST00000309422 MATR3P43243 847 aaKnown RBP eCLIP21.79■■□□□ 1.08
VEGFB-201ENST00000309422 MAPK7Q13164 816 aa21.79■■□□□ 1.08
VEGFB-201ENST00000309422 GPM6BQ13491 265 aa21.79■■□□□ 1.08
VEGFB-201ENST00000309422 LONRF3Q496Y0 759 aa21.79■■□□□ 1.08
VEGFB-201ENST00000309422 NOMO2Q5JPE7 1267 aa21.79■■□□□ 1.08
VEGFB-201ENST00000309422 DYMQ7RTS9 669 aa21.79■■□□□ 1.08
VEGFB-201ENST00000309422 THNSL1Q8IYQ7 743 aa21.79■■□□□ 1.08
VEGFB-201ENST00000309422 LPPQ93052 612 aa21.79■■□□□ 1.08
VEGFB-201ENST00000309422 TCHPQ9BT92 498 aa21.79■■□□□ 1.08
VEGFB-201ENST00000309422 SEL1LQ9UBV2 794 aa21.79■■□□□ 1.08
VEGFB-201ENST00000309422 ZDHHC9Q9Y397 364 aa21.79■■□□□ 1.08
VEGFB-201ENST00000309422 PTPRSQ13332 1948 aa21.79■■□□□ 1.08
VEGFB-201ENST00000309422 TTC3P53804 2025 aa21.79■■□□□ 1.08
VEGFB-201ENST00000309422 TRAK2O60296 914 aa21.78■■□□□ 1.08
VEGFB-201ENST00000309422 NR1I2O75469 434 aa21.78■■□□□ 1.08
VEGFB-201ENST00000309422 ZNF568Q3ZCX4 644 aa21.78■■□□□ 1.08
VEGFB-201ENST00000309422 ARSHQ5FYA8 562 aa21.78■■□□□ 1.08
VEGFB-201ENST00000309422 SHC4Q6S5L8 630 aa21.78■■□□□ 1.08
VEGFB-201ENST00000309422 CCDC65Q8IXS2 484 aa21.78■■□□□ 1.08
VEGFB-201ENST00000309422 MAFAQ8NHW3 353 aaPredicted RBP21.78■■□□□ 1.08
VEGFB-201ENST00000309422 DDX12PQ92771 950 aa21.78■■□□□ 1.08
VEGFB-201ENST00000309422 ZNF558Q96NG5 402 aa21.78■■□□□ 1.08
VEGFB-201ENST00000309422 PARP2Q9UGN5 583 aa21.78■■□□□ 1.08
VEGFB-201ENST00000309422 ATF7P17544 494 aaPredicted RBP21.77■■□□□ 1.08
VEGFB-201ENST00000309422 ALDH7A1P49419 539 aaKnown RBP21.77■■□□□ 1.08
VEGFB-201ENST00000309422 GIT2Q14161 759 aa21.77■■□□□ 1.08
VEGFB-201ENST00000309422 TIGD5Q53EQ6 642 aa21.77■■□□□ 1.08
VEGFB-201ENST00000309422 CLLU1OSQ5K130 101 aa21.77■■□□□ 1.08
VEGFB-201ENST00000309422 RESP18Q5W5W9 173 aa21.77■■□□□ 1.08
VEGFB-201ENST00000309422 ADALQ6DHV7 355 aa21.77■■□□□ 1.08
VEGFB-201ENST00000309422 STXBP4Q6ZWJ1 553 aa21.77■■□□□ 1.08
VEGFB-201ENST00000309422 MRPL10Q7Z7H8 261 aaKnown RBP21.77■■□□□ 1.08
VEGFB-201ENST00000309422 P2RX5Q93086 422 aa21.77■■□□□ 1.08
VEGFB-201ENST00000309422 PPP2R3CQ969Q6 453 aa21.77■■□□□ 1.08
VEGFB-201ENST00000309422 CASD1Q96PB1 797 aa21.77■■□□□ 1.08
VEGFB-201ENST00000309422 NTPCRQ9BSD7 190 aaKnown RBP21.77■■□□□ 1.08
VEGFB-201ENST00000309422 EIF2AQ9BY44 585 aaKnown RBP21.77■■□□□ 1.08
VEGFB-201ENST00000309422 LMAN2LQ9H0V9 348 aa21.77■■□□□ 1.08
VEGFB-201ENST00000309422 PDZD7Q9H5P4 517 aa21.77■■□□□ 1.08
VEGFB-201ENST00000309422 TYW1Q9NV66 732 aaKnown RBP21.77■■□□□ 1.08
VEGFB-201ENST00000309422 LMCD1Q9NZU5 365 aa21.77■■□□□ 1.08
VEGFB-201ENST00000309422 KCNH3Q9ULD8 1083 aa21.77■■□□□ 1.08
VEGFB-201ENST00000309422 GIT1Q9Y2X7 761 aa21.77■■□□□ 1.08
VEGFB-201ENST00000309422 SZT2Q5T011 3432 aa21.76■■□□□ 1.07
VEGFB-201ENST00000309422 C5orf67F2Z3F1 127 aa21.76■■□□□ 1.07
VEGFB-201ENST00000309422 H3BNC9 293 aa21.76■■□□□ 1.07
VEGFB-201ENST00000309422 POLR2DO15514 142 aaKnown RBP21.76■■□□□ 1.07
VEGFB-201ENST00000309422 LIG4P49917 911 aa21.76■■□□□ 1.07
VEGFB-201ENST00000309422 ZNF131P52739 623 aa21.76■■□□□ 1.07
VEGFB-201ENST00000309422 YARSP54577 528 aaKnown RBP21.76■■□□□ 1.07
VEGFB-201ENST00000309422 NCKAP1LP55160 1127 aa21.76■■□□□ 1.07
VEGFB-201ENST00000309422 BMS1Q14692 1282 aaKnown RBP21.76■■□□□ 1.07
VEGFB-201ENST00000309422 UBXN11Q5T124 520 aa21.76■■□□□ 1.07
VEGFB-201ENST00000309422 AXDND1Q5T1B0 1012 aaPredicted RBP21.76■■□□□ 1.07
VEGFB-201ENST00000309422 CDR2LQ86X02 465 aaPredicted RBP21.76■■□□□ 1.07
VEGFB-201ENST00000309422 TMEM161BQ8NDZ6 487 aa21.76■■□□□ 1.07
VEGFB-201ENST00000309422 NXF3Q9H4D5 531 aaKnown RBP21.76■■□□□ 1.07
VEGFB-201ENST00000309422 MRPL44Q9H9J2 332 aaKnown RBP21.76■■□□□ 1.07
VEGFB-201ENST00000309422 ANKFY1Q9P2R3 1169 aa21.76■■□□□ 1.07
VEGFB-201ENST00000309422 PUF60Q9UHX1 559 aaKnown RBP21.76■■□□□ 1.07
VEGFB-201ENST00000309422 ZMYM2Q9UBW7 1377 aa21.76■■□□□ 1.07
VEGFB-201ENST00000309422 HNRNPDLO14979 420 aaKnown RBP21.75■■□□□ 1.07
VEGFB-201ENST00000309422 ZC3H11AO75152 810 aaKnown RBP eCLIP21.75■■□□□ 1.07
VEGFB-201ENST00000309422 MAPTP10636 758 aaKnown RBP21.75■■□□□ 1.07
VEGFB-201ENST00000309422 KRT17Q04695 432 aa21.75■■□□□ 1.07
VEGFB-201ENST00000309422 SKIV2LQ15477 1246 aaKnown RBP21.75■■□□□ 1.07
VEGFB-201ENST00000309422 HAUS6Q7Z4H7 955 aa21.75■■□□□ 1.07
VEGFB-201ENST00000309422 CCDC94Q9BW85 323 aaPredicted RBP21.75■■□□□ 1.07
VEGFB-201ENST00000309422 TOPORSQ9NS56 1045 aaPredicted RBP21.75■■□□□ 1.07
VEGFB-201ENST00000309422 USP25Q9UHP3 1055 aa21.75■■□□□ 1.07
VEGFB-201ENST00000309422 TNFSF13BQ9Y275 285 aa21.75■■□□□ 1.07
VEGFB-201ENST00000309422 RFXAPO00287 272 aa21.74■■□□□ 1.07
VEGFB-201ENST00000309422 CMA1P23946 247 aa21.74■■□□□ 1.07
VEGFB-201ENST00000309422 MLH1P40692 756 aa21.74■■□□□ 1.07
VEGFB-201ENST00000309422 ASIC1P78348 528 aa21.74■■□□□ 1.07
VEGFB-201ENST00000309422 ALCAMQ13740 583 aa21.74■■□□□ 1.07
VEGFB-201ENST00000309422 TPRNQ4KMQ1 711 aa21.74■■□□□ 1.07
VEGFB-201ENST00000309422 ZPBP2Q6X784 338 aa21.74■■□□□ 1.07
VEGFB-201ENST00000309422 COLGALT1Q8NBJ5 622 aa21.74■■□□□ 1.07
VEGFB-201ENST00000309422 LRRC15Q8TF66 581 aa21.74■■□□□ 1.07
VEGFB-201ENST00000309422 GBP3Q9H0R5 595 aa21.74■■□□□ 1.07
VEGFB-201ENST00000309422 EXOC7Q9UPT5 735 aa21.74■■□□□ 1.07
VEGFB-201ENST00000309422 EPOPA6NHQ4 379 aa21.74■■□□□ 1.07
VEGFB-201ENST00000309422 MYMKA6NI61 221 aa21.74■■□□□ 1.07
VEGFB-201ENST00000309422 OFD1O75665 1012 aa21.74■■□□□ 1.07
VEGFB-201ENST00000309422 TOM1L1O75674 476 aa21.74■■□□□ 1.07
VEGFB-201ENST00000309422 HARSP12081 509 aaKnown RBP21.74■■□□□ 1.07
VEGFB-201ENST00000309422 UBE3AQ05086 875 aa21.74■■□□□ 1.07
VEGFB-201ENST00000309422 HERC4Q5GLZ8 1057 aaPredicted RBP21.74■■□□□ 1.07
VEGFB-201ENST00000309422 MPZL3Q6UWV2 235 aa21.74■■□□□ 1.07
VEGFB-201ENST00000309422 AGMOQ6ZNB7 445 aa21.74■■□□□ 1.07
VEGFB-201ENST00000309422 SPRED2Q7Z698 418 aa21.74■■□□□ 1.07
VEGFB-201ENST00000309422 SFR1Q86XK3 245 aa21.74■■□□□ 1.07
VEGFB-201ENST00000309422 SMG8Q8ND04 991 aaKnown RBP21.74■■□□□ 1.07
VEGFB-201ENST00000309422 PPM1EQ8WY54 764 aa21.74■■□□□ 1.07
VEGFB-201ENST00000309422 MRPS27Q92552 414 aaKnown RBP21.74■■□□□ 1.07
VEGFB-201ENST00000309422 HVCN1Q96D96 273 aa21.74■■□□□ 1.07
VEGFB-201ENST00000309422 MRPL38Q96DV4 380 aaKnown RBP21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms