RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 CLDN3O15551 220 aa11.96□□□□□ -0.49
PTPN7-201ENST00000309017 SLURP2P0DP57 97 aa11.96□□□□□ -0.49
PTPN7-201ENST00000309017 GRAPQ13588 217 aa11.96□□□□□ -0.49
PTPN7-201ENST00000309017 ZC3H3Q8IXZ2 948 aaKnown RBP11.96□□□□□ -0.49
PTPN7-201ENST00000309017 PPM1KQ8N3J5 372 aa11.96□□□□□ -0.49
PTPN7-201ENST00000309017 SLC30A5Q8TAD4 765 aa11.96□□□□□ -0.49
PTPN7-201ENST00000309017 GRAPLQ8TC17 118 aaPredicted RBP11.96□□□□□ -0.49
PTPN7-201ENST00000309017 RAB3IPQ96QF0 476 aaPredicted RBP11.96□□□□□ -0.49
PTPN7-201ENST00000309017 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.96□□□□□ -0.49
PTPN7-201ENST00000309017 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.96□□□□□ -0.5
PTPN7-201ENST00000309017 GH1P01241 217 aa11.96□□□□□ -0.5
PTPN7-201ENST00000309017 PTGIRP43119 386 aa11.96□□□□□ -0.5
PTPN7-201ENST00000309017 CLK2P49760 499 aaKnown RBP11.96□□□□□ -0.5
PTPN7-201ENST00000309017 CCNHP51946 323 aaPredicted RBP11.96□□□□□ -0.5
PTPN7-201ENST00000309017 CYP4F22Q6NT55 531 aa11.96□□□□□ -0.5
PTPN7-201ENST00000309017 ZNF449Q6P9G9 518 aa11.96□□□□□ -0.5
PTPN7-201ENST00000309017 ARHGEF18Q6ZSZ5 1173 aa11.96□□□□□ -0.5
PTPN7-201ENST00000309017 SLC13A5Q86YT5 568 aaPredicted RBP11.96□□□□□ -0.5
PTPN7-201ENST00000309017 SLC17A8Q8NDX2 589 aa11.96□□□□□ -0.5
PTPN7-201ENST00000309017 LAMB1P07942 1786 aa11.96□□□□□ -0.5
PTPN7-201ENST00000309017 BHMG1C9JSJ3 638 aaPredicted RBP11.95□□□□□ -0.5
PTPN7-201ENST00000309017 TGFB1I1O43294 461 aa11.95□□□□□ -0.5
PTPN7-201ENST00000309017 SPATA31C1P0DKV0 1188 aa11.95□□□□□ -0.5
PTPN7-201ENST00000309017 TAL1P17542 331 aaPredicted RBP11.95□□□□□ -0.5
PTPN7-201ENST00000309017 GCLMP48507 274 aa11.95□□□□□ -0.5
PTPN7-201ENST00000309017 SCNN1DP51172 638 aa11.95□□□□□ -0.5
PTPN7-201ENST00000309017 RHBDL3P58872 404 aa11.95□□□□□ -0.5
PTPN7-201ENST00000309017 TMED2Q15363 201 aa11.95□□□□□ -0.5
PTPN7-201ENST00000309017 SLFN13Q68D06 897 aa11.95□□□□□ -0.5
PTPN7-201ENST00000309017 DPY19L2P1Q6NXN4 242 aa11.95□□□□□ -0.5
PTPN7-201ENST00000309017 TRMT10CQ7L0Y3 403 aaKnown RBP11.95□□□□□ -0.5
PTPN7-201ENST00000309017 ROPN1BQ9BZX4 212 aaPredicted RBP11.95□□□□□ -0.5
PTPN7-201ENST00000309017 ROPN1Q9HAT0 212 aaPredicted RBP11.95□□□□□ -0.5
PTPN7-201ENST00000309017 RREB1Q92766 1687 aa11.95□□□□□ -0.5
PTPN7-201ENST00000309017 GAS8O95995 478 aa11.95□□□□□ -0.5
PTPN7-201ENST00000309017 RWDD2BP57060 319 aa11.95□□□□□ -0.5
PTPN7-201ENST00000309017 TBC1D10BQ4KMP7 808 aaPredicted RBP11.95□□□□□ -0.5
PTPN7-201ENST00000309017 ANKRD20A2Q5SQ80 823 aa11.95□□□□□ -0.5
PTPN7-201ENST00000309017 ANKRD20A1Q5TYW2 823 aa11.95□□□□□ -0.5
PTPN7-201ENST00000309017 ANKRD20A3Q5VUR7 823 aa11.95□□□□□ -0.5
PTPN7-201ENST00000309017 RINT1Q6NUQ1 792 aa11.95□□□□□ -0.5
PTPN7-201ENST00000309017 CAPN12Q6ZSI9 719 aa11.95□□□□□ -0.5
PTPN7-201ENST00000309017 PHLDB2Q86SQ0 1253 aa11.95□□□□□ -0.5
PTPN7-201ENST00000309017 FITM2Q8N6M3 262 aa11.95□□□□□ -0.5
PTPN7-201ENST00000309017 CNBD1Q8NA66 436 aa11.95□□□□□ -0.5
PTPN7-201ENST00000309017 CYP2W1Q8TAV3 490 aa11.95□□□□□ -0.5
PTPN7-201ENST00000309017 ZNF564Q8TBZ8 553 aaPredicted RBP11.95□□□□□ -0.5
PTPN7-201ENST00000309017 NUP85Q9BW27 656 aa11.95□□□□□ -0.5
PTPN7-201ENST00000309017 NARFQ9UHQ1 456 aa11.95□□□□□ -0.5
PTPN7-201ENST00000309017 EYA4O95677 639 aa11.95□□□□□ -0.5
PTPN7-201ENST00000309017 ATF2P15336 505 aa11.95□□□□□ -0.5
PTPN7-201ENST00000309017 UBXN2AP68543 259 aa11.95□□□□□ -0.5
PTPN7-201ENST00000309017 GPSM2P81274 684 aa11.95□□□□□ -0.5
PTPN7-201ENST00000309017 EPM2AIP1Q7L775 607 aaPredicted RBP11.95□□□□□ -0.5
PTPN7-201ENST00000309017 CDCA7Q9BWT1 371 aaPredicted RBP11.95□□□□□ -0.5
PTPN7-201ENST00000309017 PCYOX1Q9UHG3 505 aa11.95□□□□□ -0.5
PTPN7-201ENST00000309017 DAGLAQ9Y4D2 1042 aa11.95□□□□□ -0.5
PTPN7-201ENST00000309017 KIAA1551Q9HCM1 1747 aa11.95□□□□□ -0.5
PTPN7-201ENST00000309017 EMSYQ7Z589 1322 aa11.94□□□□□ -0.5
PTPN7-201ENST00000309017 ZBTB39O15060 712 aa11.94□□□□□ -0.5
PTPN7-201ENST00000309017 TOM1O60784 492 aa11.94□□□□□ -0.5
PTPN7-201ENST00000309017 LUC7L3O95232 432 aaKnown RBP11.94□□□□□ -0.5
PTPN7-201ENST00000309017 PDHA1P08559 390 aa11.94□□□□□ -0.5
PTPN7-201ENST00000309017 IRX1P78414 480 aaPredicted RBP11.94□□□□□ -0.5
PTPN7-201ENST00000309017 TCP10Q12799 353 aa11.94□□□□□ -0.5
PTPN7-201ENST00000309017 ZNF365Q70YC5 407 aa11.94□□□□□ -0.5
PTPN7-201ENST00000309017 GSTA5Q7RTV2 222 aa11.94□□□□□ -0.5
PTPN7-201ENST00000309017 ATG4AQ8WYN0 398 aa11.94□□□□□ -0.5
PTPN7-201ENST00000309017 DYDC2Q96IM9 177 aa11.94□□□□□ -0.5
PTPN7-201ENST00000309017 ZNF570Q96NI8 536 aa11.94□□□□□ -0.5
PTPN7-201ENST00000309017 AMNQ9BXJ7 453 aa11.94□□□□□ -0.5
PTPN7-201ENST00000309017 WNT8AQ9H1J5 351 aa11.94□□□□□ -0.5
PTPN7-201ENST00000309017 RXFP1Q9HBX9 757 aa11.94□□□□□ -0.5
PTPN7-201ENST00000309017 ANAPC5Q9UJX4 755 aa11.94□□□□□ -0.5
PTPN7-201ENST00000309017 MYO3BQ8WXR4 1341 aa11.94□□□□□ -0.5
PTPN7-201ENST00000309017 SESN3P58005 492 aa11.94□□□□□ -0.5
PTPN7-201ENST00000309017 IL9RQ01113 521 aa11.94□□□□□ -0.5
PTPN7-201ENST00000309017 STRN3Q13033 797 aa11.94□□□□□ -0.5
PTPN7-201ENST00000309017 PHLDB3Q6NSJ2 640 aa11.94□□□□□ -0.5
PTPN7-201ENST00000309017 MIGA2Q7L4E1 593 aa11.94□□□□□ -0.5
PTPN7-201ENST00000309017 FBXO11Q86XK2 927 aa11.94□□□□□ -0.5
PTPN7-201ENST00000309017 CPNE8Q86YQ8 564 aa11.94□□□□□ -0.5
PTPN7-201ENST00000309017 KIAA0825Q8IV33 1275 aa11.94□□□□□ -0.5
PTPN7-201ENST00000309017 MAB21L3Q8N8X9 362 aa11.94□□□□□ -0.5
PTPN7-201ENST00000309017 ERP27Q96DN0 273 aa11.94□□□□□ -0.5
PTPN7-201ENST00000309017 RMDN2Q96LZ7 410 aa11.94□□□□□ -0.5
PTPN7-201ENST00000309017 TXLNGQ9NUQ3 528 aa11.94□□□□□ -0.5
PTPN7-201ENST00000309017 PKD2L1Q9P0L9 805 aa11.94□□□□□ -0.5
PTPN7-201ENST00000309017 RASA4BC9J798 803 aa11.94□□□□□ -0.5
PTPN7-201ENST00000309017 FAM86B1E9PN63 330 aa11.94□□□□□ -0.5
PTPN7-201ENST00000309017 K7ENM7 598 aa11.94□□□□□ -0.5
PTPN7-201ENST00000309017 RASA4O43374 803 aa11.94□□□□□ -0.5
PTPN7-201ENST00000309017 SPAG7O75391 227 aa11.94□□□□□ -0.5
PTPN7-201ENST00000309017 GGPS1O95749 300 aa11.94□□□□□ -0.5
PTPN7-201ENST00000309017 FAM86B2P0C5J1 330 aa11.94□□□□□ -0.5
PTPN7-201ENST00000309017 BNIP1Q12981 228 aa11.94□□□□□ -0.5
PTPN7-201ENST00000309017 AP3B2Q13367 1082 aa11.94□□□□□ -0.5
PTPN7-201ENST00000309017 SEPT7Q16181 437 aaKnown RBP11.94□□□□□ -0.5
PTPN7-201ENST00000309017 CCDC6Q16204 474 aa11.94□□□□□ -0.5
PTPN7-201ENST00000309017 LMNTD2Q8IXW0 634 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms