RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 CLDN23Q96B33 292 aa13.32□□□□□ -0.28
SMIM4-201ENST00000307106 TMEM87BQ96K49 555 aa13.32□□□□□ -0.28
SMIM4-201ENST00000307106 FAM126AQ9BYI3 521 aaPredicted RBP13.32□□□□□ -0.28
SMIM4-201ENST00000307106 PRMT8Q9NR22 394 aaPredicted RBP13.32□□□□□ -0.28
SMIM4-201ENST00000307106 ANGPTL2Q9UKU9 493 aa13.32□□□□□ -0.28
SMIM4-201ENST00000307106 CDH7Q9ULB5 785 aa13.32□□□□□ -0.28
SMIM4-201ENST00000307106 SLC12A7Q9Y666 1083 aa13.32□□□□□ -0.28
SMIM4-201ENST00000307106 CNTNAP2Q9UHC6 1331 aa13.32□□□□□ -0.28
SMIM4-201ENST00000307106 COL4A2P08572 1712 aa13.31□□□□□ -0.28
SMIM4-201ENST00000307106 NCAM2O15394 837 aa13.31□□□□□ -0.28
SMIM4-201ENST00000307106 C1RP00736 705 aa13.31□□□□□ -0.28
SMIM4-201ENST00000307106 TARSP26639 723 aaKnown RBP13.31□□□□□ -0.28
SMIM4-201ENST00000307106 MCM5P33992 734 aa13.31□□□□□ -0.28
SMIM4-201ENST00000307106 LIFRP42702 1097 aa13.31□□□□□ -0.28
SMIM4-201ENST00000307106 OR1G1P47890 313 aa13.31□□□□□ -0.28
SMIM4-201ENST00000307106 NUCB1Q02818 461 aa13.31□□□□□ -0.28
SMIM4-201ENST00000307106 UGCGQ16739 394 aa13.31□□□□□ -0.28
SMIM4-201ENST00000307106 JAKMIP3Q5VZ66 844 aa13.31□□□□□ -0.28
SMIM4-201ENST00000307106 GRASPQ7Z6J2 395 aaPredicted RBP13.31□□□□□ -0.28
SMIM4-201ENST00000307106 ZNF410Q86VK4 478 aa13.31□□□□□ -0.28
SMIM4-201ENST00000307106 RHPN2Q8IUC4 686 aa13.31□□□□□ -0.28
SMIM4-201ENST00000307106 RUFY2Q8WXA3 655 aa13.31□□□□□ -0.28
SMIM4-201ENST00000307106 CRYGNQ8WXF5 182 aa13.31□□□□□ -0.28
SMIM4-201ENST00000307106 NELL2Q99435 816 aa13.31□□□□□ -0.28
SMIM4-201ENST00000307106 GLT8D2Q9H1C3 349 aa13.31□□□□□ -0.28
SMIM4-201ENST00000307106 DISC1Q9NRI5 854 aa13.31□□□□□ -0.28
SMIM4-201ENST00000307106 ZMYND10O75800 440 aa13.3□□□□□ -0.28
SMIM4-201ENST00000307106 EFEMP2O95967 443 aa13.3□□□□□ -0.28
SMIM4-201ENST00000307106 RPS9P46781 194 aaKnown RBP13.3□□□□□ -0.28
SMIM4-201ENST00000307106 DNM2P50570 870 aa13.3□□□□□ -0.28
SMIM4-201ENST00000307106 TARBP2Q15633 366 aaKnown RBP13.3□□□□□ -0.28
SMIM4-201ENST00000307106 MTERF2Q49AM1 385 aa13.3□□□□□ -0.28
SMIM4-201ENST00000307106 PRR16Q569H4 304 aa13.3□□□□□ -0.28
SMIM4-201ENST00000307106 LAIR1Q6GTX8 287 aa13.3□□□□□ -0.28
SMIM4-201ENST00000307106 TPRG1Q6ZUI0 275 aa13.3□□□□□ -0.28
SMIM4-201ENST00000307106 MRPL10Q7Z7H8 261 aaKnown RBP13.3□□□□□ -0.28
SMIM4-201ENST00000307106 COLGALT2Q8IYK4 626 aa13.3□□□□□ -0.28
SMIM4-201ENST00000307106 FGF13Q92913 245 aa13.3□□□□□ -0.28
SMIM4-201ENST00000307106 B3GALT6Q96L58 329 aa13.3□□□□□ -0.28
SMIM4-201ENST00000307106 NLRP4Q96MN2 994 aa13.3□□□□□ -0.28
SMIM4-201ENST00000307106 FAM217BQ9NTX9 383 aaPredicted RBP13.3□□□□□ -0.28
SMIM4-201ENST00000307106 AGPAT5Q9NUQ2 364 aa13.3□□□□□ -0.28
SMIM4-201ENST00000307106 SEPT9Q9UHD8 586 aaPredicted RBP13.3□□□□□ -0.28
SMIM4-201ENST00000307106 F5P12259 2224 aa13.29□□□□□ -0.28
SMIM4-201ENST00000307106 TRIP11Q15643 1979 aa13.29□□□□□ -0.28
SMIM4-201ENST00000307106 hCG_1984214I3L0E3 225 aa13.29□□□□□ -0.28
SMIM4-201ENST00000307106 LRP3O75074 770 aa13.29□□□□□ -0.28
SMIM4-201ENST00000307106 NTHL1P78549 312 aa13.29□□□□□ -0.28
SMIM4-201ENST00000307106 MTAPQ13126 283 aa13.29□□□□□ -0.28
SMIM4-201ENST00000307106 LILRA6Q6PI73 481 aa13.29□□□□□ -0.28
SMIM4-201ENST00000307106 PRR23CQ6ZRP0 262 aa13.29□□□□□ -0.28
SMIM4-201ENST00000307106 PRR23BQ6ZRT6 265 aa13.29□□□□□ -0.28
SMIM4-201ENST00000307106 KSR1Q8IVT5 923 aa13.29□□□□□ -0.28
SMIM4-201ENST00000307106 CELF5Q8N6W0 485 aaKnown RBP13.29□□□□□ -0.28
SMIM4-201ENST00000307106 ZNF713Q8N859 430 aaPredicted RBP13.29□□□□□ -0.28
SMIM4-201ENST00000307106 KXD1Q9BQD3 176 aa13.29□□□□□ -0.28
SMIM4-201ENST00000307106 PHF20Q9BVI0 1012 aa13.29□□□□□ -0.28
SMIM4-201ENST00000307106 SH2B1Q9NRF2 756 aaPredicted RBP13.29□□□□□ -0.28
SMIM4-201ENST00000307106 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.29□□□□□ -0.28
SMIM4-201ENST00000307106 CHST7Q9NS84 486 aa13.29□□□□□ -0.28
SMIM4-201ENST00000307106 SEMA4GQ9NTN9 838 aa13.29□□□□□ -0.28
SMIM4-201ENST00000307106 BARHL2Q9NY43 387 aa13.29□□□□□ -0.28
SMIM4-201ENST00000307106 FNIP2Q9P278 1114 aa13.29□□□□□ -0.28
SMIM4-201ENST00000307106 SUCLA2Q9P2R7 463 aaPredicted RBP13.29□□□□□ -0.28
SMIM4-201ENST00000307106 ASPMQ8IZT6 3477 aa13.28□□□□□ -0.28
SMIM4-201ENST00000307106 IGKV6-21A0A0C4DH24 114 aa13.28□□□□□ -0.28
SMIM4-201ENST00000307106 F8W810 466 aa13.28□□□□□ -0.28
SMIM4-201ENST00000307106 CHMP2AO43633 222 aa13.28□□□□□ -0.28
SMIM4-201ENST00000307106 RETP07949 1114 aa13.28□□□□□ -0.28
SMIM4-201ENST00000307106 RPL17P18621 184 aaKnown RBP13.28□□□□□ -0.28
SMIM4-201ENST00000307106 PMLP29590 882 aa13.28□□□□□ -0.28
SMIM4-201ENST00000307106 NRLP54845 237 aa13.28□□□□□ -0.28
SMIM4-201ENST00000307106 DDX1Q92499 740 aaKnown RBP13.28□□□□□ -0.28
SMIM4-201ENST00000307106 MAP4K1Q92918 833 aa13.28□□□□□ -0.28
SMIM4-201ENST00000307106 CEP89Q96ST8 783 aa13.28□□□□□ -0.28
SMIM4-201ENST00000307106 SH2D3AQ9BRG2 576 aa13.28□□□□□ -0.28
SMIM4-201ENST00000307106 NIFKQ9BYG3 293 aaKnown RBP13.28□□□□□ -0.28
SMIM4-201ENST00000307106 LRRC2Q9BYS8 371 aa13.28□□□□□ -0.28
SMIM4-201ENST00000307106 RBM28Q9NW13 759 aaKnown RBP13.28□□□□□ -0.28
SMIM4-201ENST00000307106 MRPS17Q9Y2R5 130 aaKnown RBP13.28□□□□□ -0.28
SMIM4-201ENST00000307106 RBM8AQ9Y5S9 174 aaKnown RBP13.28□□□□□ -0.28
SMIM4-201ENST00000307106 V9GY48 417 aaPredicted RBP13.28□□□□□ -0.28
SMIM4-201ENST00000307106 SDK1Q7Z5N4 2213 aa13.27□□□□□ -0.28
SMIM4-201ENST00000307106 TMEM150BA6NC51 233 aa13.27□□□□□ -0.29
SMIM4-201ENST00000307106 GDF9O60383 454 aa13.27□□□□□ -0.29
SMIM4-201ENST00000307106 NR1I2O75469 434 aa13.27□□□□□ -0.29
SMIM4-201ENST00000307106 TDGF1P13385 188 aa13.27□□□□□ -0.29
SMIM4-201ENST00000307106 HOXB3P14651 431 aaPredicted RBP13.27□□□□□ -0.29
SMIM4-201ENST00000307106 NCLP19338 710 aaKnown RBP13.27□□□□□ -0.29
SMIM4-201ENST00000307106 SFNP31947 248 aa13.27□□□□□ -0.29
SMIM4-201ENST00000307106 DSC1Q08554 894 aa13.27□□□□□ -0.29
SMIM4-201ENST00000307106 ADCY1Q08828 1119 aa13.27□□□□□ -0.29
SMIM4-201ENST00000307106 FZD5Q13467 585 aa13.27□□□□□ -0.29
SMIM4-201ENST00000307106 ACAP1Q15027 740 aa13.27□□□□□ -0.29
SMIM4-201ENST00000307106 CSRP2Q16527 193 aa13.27□□□□□ -0.29
SMIM4-201ENST00000307106 USP41Q3LFD5 358 aa13.27□□□□□ -0.29
SMIM4-201ENST00000307106 UBXN11Q5T124 520 aa13.27□□□□□ -0.29
SMIM4-201ENST00000307106 FUT10Q6P4F1 479 aa13.27□□□□□ -0.29
SMIM4-201ENST00000307106 ZNF852Q6ZMS4 543 aa13.27□□□□□ -0.29
SMIM4-201ENST00000307106 SYNE3Q6ZMZ3 975 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms