RNA–Protein interactions for RNA: ENST00000306320.9

RETREG1-201, Transcript of reticulophagy regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG1, Length 3,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-201ENST00000306320 NUCKS1Q9H1E3 243 aaKnown RBP19.24■□□□□ 0.67
RETREG1-201ENST00000306320 CUEDC2Q9H467 287 aa19.24■□□□□ 0.67
RETREG1-201ENST00000306320 AJAP1Q9UKB5 411 aaPredicted RBP19.24■□□□□ 0.67
RETREG1-201ENST00000306320 SUGT1Q9Y2Z0 365 aa19.24■□□□□ 0.67
RETREG1-201ENST00000306320 SMCHD1A6NHR9 2005 aa19.24■□□□□ 0.67
RETREG1-201ENST00000306320 ENTPD5O75356 428 aa19.24■□□□□ 0.67
RETREG1-201ENST00000306320 GBP1P32455 592 aa19.24■□□□□ 0.67
RETREG1-201ENST00000306320 SFR1Q86XK3 245 aa19.24■□□□□ 0.67
RETREG1-201ENST00000306320 TTC8Q8TAM2 541 aa19.24■□□□□ 0.67
RETREG1-201ENST00000306320 ELMO3Q96BJ8 720 aa19.24■□□□□ 0.67
RETREG1-201ENST00000306320 GLIS2Q9BZE0 524 aaPredicted RBP19.24■□□□□ 0.67
RETREG1-201ENST00000306320 PPP1R2P41236 205 aa19.23■□□□□ 0.67
RETREG1-201ENST00000306320 RPL21P46778 160 aaKnown RBP19.23■□□□□ 0.67
RETREG1-201ENST00000306320 PAPOLAP51003 745 aaKnown RBP19.23■□□□□ 0.67
RETREG1-201ENST00000306320 ADCY2Q08462 1091 aa19.23■□□□□ 0.67
RETREG1-201ENST00000306320 NBPF20Q3BBV1 942 aa19.23■□□□□ 0.67
RETREG1-201ENST00000306320 NLGN1Q8N2Q7 840 aa19.23■□□□□ 0.67
RETREG1-201ENST00000306320 RBM46Q8TBY0 533 aaKnown RBP19.23■□□□□ 0.67
RETREG1-201ENST00000306320 TRIM4Q9C037 500 aa19.23■□□□□ 0.67
RETREG1-201ENST00000306320 hCG_2014768A0A024R1R8 64 aa19.23■□□□□ 0.67
RETREG1-201ENST00000306320 CASP4P49662 377 aa19.23■□□□□ 0.67
RETREG1-201ENST00000306320 FXR2P51116 673 aaKnown RBP eCLIP19.23■□□□□ 0.67
RETREG1-201ENST00000306320 ZFYVE27Q5T4F4 411 aa19.23■□□□□ 0.67
RETREG1-201ENST00000306320 CYP4F22Q6NT55 531 aa19.23■□□□□ 0.67
RETREG1-201ENST00000306320 SPOCK2Q92563 424 aa19.23■□□□□ 0.67
RETREG1-201ENST00000306320 BTBD6Q96KE9 485 aa19.23■□□□□ 0.67
RETREG1-201ENST00000306320 ADAM7Q9H2U9 754 aa19.23■□□□□ 0.67
RETREG1-201ENST00000306320 IGKV6D-41A0A0C4DH26 115 aa19.22■□□□□ 0.67
RETREG1-201ENST00000306320 MEIS2O14770 477 aa19.22■□□□□ 0.67
RETREG1-201ENST00000306320 ASAP2O43150 1006 aa19.22■□□□□ 0.67
RETREG1-201ENST00000306320 ALDH1B1P30837 517 aa19.22■□□□□ 0.67
RETREG1-201ENST00000306320 CALCOCO2Q13137 446 aa19.22■□□□□ 0.67
RETREG1-201ENST00000306320 ITIH4Q14624 930 aa19.22■□□□□ 0.67
RETREG1-201ENST00000306320 CNGA2Q16280 664 aa19.22■□□□□ 0.67
RETREG1-201ENST00000306320 GRIPAP1Q4V328 841 aa19.22■□□□□ 0.67
RETREG1-201ENST00000306320 ZC2HC1CQ53FD0 456 aaPredicted RBP19.22■□□□□ 0.67
RETREG1-201ENST00000306320 EMC10Q5UCC4 262 aa19.22■□□□□ 0.67
RETREG1-201ENST00000306320 FBXO11Q86XK2 927 aa19.22■□□□□ 0.67
RETREG1-201ENST00000306320 SLITRK6Q9H5Y7 841 aa19.22■□□□□ 0.67
RETREG1-201ENST00000306320 PI4KBQ9UBF8 816 aa19.22■□□□□ 0.67
RETREG1-201ENST00000306320 TMEM59LQ9UK28 342 aa19.22■□□□□ 0.67
RETREG1-201ENST00000306320 RREB1Q92766 1687 aa19.22■□□□□ 0.67
RETREG1-201ENST00000306320 MYH1P12882 1939 aa19.22■□□□□ 0.67
RETREG1-201ENST00000306320 ANKRD63C9JTQ0 380 aa19.22■□□□□ 0.67
RETREG1-201ENST00000306320 H0YIN7 160 aa19.22■□□□□ 0.67
RETREG1-201ENST00000306320 RWDD2BP57060 319 aa19.22■□□□□ 0.67
RETREG1-201ENST00000306320 DNAJC3Q13217 504 aa19.22■□□□□ 0.67
RETREG1-201ENST00000306320 GPATCH4Q5T3I0 446 aaKnown RBP19.22■□□□□ 0.67
RETREG1-201ENST00000306320 C6orf118Q5T5N4 469 aa19.22■□□□□ 0.67
RETREG1-201ENST00000306320 PIGWQ7Z7B1 504 aa19.22■□□□□ 0.67
RETREG1-201ENST00000306320 NT5DC3Q86UY8 548 aa19.22■□□□□ 0.67
RETREG1-201ENST00000306320 ZC3H18Q86VM9 953 aaKnown RBP19.22■□□□□ 0.67
RETREG1-201ENST00000306320 CPXCR1Q8N123 301 aa19.22■□□□□ 0.67
RETREG1-201ENST00000306320 ATP8B4Q8TF62 1192 aa19.22■□□□□ 0.67
RETREG1-201ENST00000306320 TLCD1Q96CP7 247 aa19.22■□□□□ 0.67
RETREG1-201ENST00000306320 MASTLQ96GX5 879 aa19.22■□□□□ 0.67
RETREG1-201ENST00000306320 IGSF9BQ9UPX0 1349 aa19.22■□□□□ 0.67
RETREG1-201ENST00000306320 EML1O00423 815 aa19.22■□□□□ 0.67
RETREG1-201ENST00000306320 GCNT3O95395 438 aa19.22■□□□□ 0.67
RETREG1-201ENST00000306320 CBX6O95503 412 aa19.22■□□□□ 0.67
RETREG1-201ENST00000306320 SNHG28P0DPA3 235 aa19.22■□□□□ 0.67
RETREG1-201ENST00000306320 MMP13P45452 471 aa19.22■□□□□ 0.67
RETREG1-201ENST00000306320 MTM1Q13496 603 aa19.22■□□□□ 0.67
RETREG1-201ENST00000306320 ZNF268Q14587 947 aaPredicted RBP19.22■□□□□ 0.67
RETREG1-201ENST00000306320 CDCA2Q69YH5 1023 aaPredicted RBP19.22■□□□□ 0.67
RETREG1-201ENST00000306320 NSMFQ6X4W1 530 aa19.22■□□□□ 0.67
RETREG1-201ENST00000306320 APBB1IPQ7Z5R6 666 aaPredicted RBP19.22■□□□□ 0.67
RETREG1-201ENST00000306320 PRUNE1Q86TP1 453 aa19.22■□□□□ 0.67
RETREG1-201ENST00000306320 EXOC3L1Q86VI1 746 aa19.22■□□□□ 0.67
RETREG1-201ENST00000306320 SCFD1Q8WVM8 642 aa19.22■□□□□ 0.67
RETREG1-201ENST00000306320 TAS2R14Q9NYV8 317 aa19.22■□□□□ 0.67
RETREG1-201ENST00000306320 C2CD2Q9Y426 696 aa19.22■□□□□ 0.67
RETREG1-201ENST00000306320 PYGLP06737 847 aa19.21■□□□□ 0.67
RETREG1-201ENST00000306320 CYP11B2P19099 503 aa19.21■□□□□ 0.67
RETREG1-201ENST00000306320 KYNUQ16719 465 aa19.21■□□□□ 0.67
RETREG1-201ENST00000306320 ARSHQ5FYA8 562 aa19.21■□□□□ 0.67
RETREG1-201ENST00000306320 CCDC137Q6PK04 289 aaKnown RBP19.21■□□□□ 0.67
RETREG1-201ENST00000306320 CRELD2Q6UXH1 353 aaPredicted RBP19.21■□□□□ 0.67
RETREG1-201ENST00000306320 CPNE8Q86YQ8 564 aa19.21■□□□□ 0.67
RETREG1-201ENST00000306320 CCDC65Q8IXS2 484 aa19.21■□□□□ 0.67
RETREG1-201ENST00000306320 C1orf54Q8WWF1 131 aa19.21■□□□□ 0.67
RETREG1-201ENST00000306320 KRT35Q92764 455 aa19.21■□□□□ 0.67
RETREG1-201ENST00000306320 ARHGEF26Q96DR7 871 aa19.21■□□□□ 0.67
RETREG1-201ENST00000306320 PITPNM3Q9BZ71 974 aa19.21■□□□□ 0.67
RETREG1-201ENST00000306320 ZNF277Q9NRM2 450 aaPredicted RBP19.21■□□□□ 0.67
RETREG1-201ENST00000306320 ADAMTSL1Q8N6G6 1762 aa19.21■□□□□ 0.67
RETREG1-201ENST00000306320 NAV1Q8NEY1 1877 aa19.21■□□□□ 0.67
RETREG1-201ENST00000306320 PAEPP09466 180 aa19.21■□□□□ 0.67
RETREG1-201ENST00000306320 EPHB2P29323 1055 aa19.21■□□□□ 0.67
RETREG1-201ENST00000306320 USP4Q13107 963 aa19.21■□□□□ 0.67
RETREG1-201ENST00000306320 SETDB1Q15047 1291 aa19.21■□□□□ 0.67
RETREG1-201ENST00000306320 DDX50Q9BQ39 737 aaKnown RBP19.21■□□□□ 0.67
RETREG1-201ENST00000306320 THAP2Q9H0W7 228 aa19.21■□□□□ 0.67
RETREG1-201ENST00000306320 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.21■□□□□ 0.67
RETREG1-201ENST00000306320 NKIRAS1Q9NYS0 192 aa19.21■□□□□ 0.67
RETREG1-201ENST00000306320 DDX3XO00571 662 aaKnown RBP eCLIP19.2■□□□□ 0.66
RETREG1-201ENST00000306320 STAT1P42224 750 aa19.2■□□□□ 0.66
RETREG1-201ENST00000306320 SEMA3FQ13275 785 aa19.2■□□□□ 0.66
RETREG1-201ENST00000306320 ALG3Q92685 438 aa19.2■□□□□ 0.66
RETREG1-201ENST00000306320 REEP2Q9BRK0 252 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms